RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 KRTAP19-7Q3SYF9 63 aa4.56□□□□□ -1.68
SHROOM4-201ENST00000289292 MT4P47944 62 aa4.55□□□□□ -1.68
SHROOM4-201ENST00000289292 LCE2DQ5TA82 110 aaPredicted RBP4.54□□□□□ -1.68
SHROOM4-201ENST00000289292 EPPK1P58107 5090 aaKnown RBP4.51□□□□□ -1.69
SHROOM4-201ENST00000289292 KRTAP2-3P0C7H8 128 aa4.5□□□□□ -1.69
SHROOM4-201ENST00000289292 KRTAP2-4Q9BYR9 128 aa4.5□□□□□ -1.69
SHROOM4-201ENST00000289292 KRTAP2-1Q9BYU5 128 aa4.5□□□□□ -1.69
SHROOM4-201ENST00000289292 MT3P25713 68 aa4.49□□□□□ -1.69
SHROOM4-201ENST00000289292 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
SHROOM4-201ENST00000289292 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
SHROOM4-201ENST00000289292 ABCA13Q86UQ4 5058 aa4.42□□□□□ -1.7
SHROOM4-201ENST00000289292 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
SHROOM4-201ENST00000289292 FAT4Q6V0I7 4981 aa4.4□□□□□ -1.7
SHROOM4-201ENST00000289292 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
SHROOM4-201ENST00000289292 MT1AP04731 61 aa4.33□□□□□ -1.72
SHROOM4-201ENST00000289292 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
SHROOM4-201ENST00000289292 UBR4Q5T4S7 5183 aa4.28□□□□□ -1.73
SHROOM4-201ENST00000289292 LCE2AQ5TA79 106 aaPredicted RBP4.26□□□□□ -1.73
SHROOM4-201ENST00000289292 KRTAP6-1Q3LI64 71 aa4.25□□□□□ -1.73
SHROOM4-201ENST00000289292 FSIP2Q5CZC0 6907 aa4.25□□□□□ -1.73
SHROOM4-201ENST00000289292 KRTAP9-2Q9BYQ4 174 aa4.24□□□□□ -1.73
SHROOM4-201ENST00000289292 RNF213Q63HN8 5207 aa4.23□□□□□ -1.73
SHROOM4-201ENST00000289292 MUC2Q02817 5179 aa4.22□□□□□ -1.73
SHROOM4-201ENST00000289292 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
SHROOM4-201ENST00000289292 KRTAP9-7A8MTY7 169 aa4.19□□□□□ -1.74
SHROOM4-201ENST00000289292 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
SHROOM4-201ENST00000289292 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
SHROOM4-201ENST00000289292 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
SHROOM4-201ENST00000289292 KMT2DO14686 5537 aa3.97□□□□□ -1.77
SHROOM4-201ENST00000289292 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
SHROOM4-201ENST00000289292 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
SHROOM4-201ENST00000289292 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
SHROOM4-201ENST00000289292 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
SHROOM4-201ENST00000289292 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
SHROOM4-201ENST00000289292 FCGBPQ9Y6R7 5405 aaPredicted RBP3.73□□□□□ -1.81
SHROOM4-201ENST00000289292 KRTAP6-3Q3LI67 103 aa3.72□□□□□ -1.81
SHROOM4-201ENST00000289292 LCE4AQ5TA78 99 aa3.66□□□□□ -1.82
SHROOM4-201ENST00000289292 LCE1CQ5T751 118 aa3.65□□□□□ -1.82
SHROOM4-201ENST00000289292 LCE1EQ5T753 118 aa3.65□□□□□ -1.82
SHROOM4-201ENST00000289292 LCE1FQ5T754 118 aa3.65□□□□□ -1.82
SHROOM4-201ENST00000289292 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.65□□□□□ -1.82
SHROOM4-201ENST00000289292 USH2AO75445 5202 aa3.63□□□□□ -1.83
SHROOM4-201ENST00000289292 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.83
SHROOM4-201ENST00000289292 SSPOA2VEC9 5147 aa3.54□□□□□ -1.84
SHROOM4-201ENST00000289292 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
SHROOM4-201ENST00000289292 KRTAP4-6Q9BYQ5 205 aa3.42□□□□□ -1.86
SHROOM4-201ENST00000289292 MACF1Q9UPN3 7388 aaKnown RBP3.41□□□□□ -1.86
SHROOM4-201ENST00000289292 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
SHROOM4-201ENST00000289292 MUC12Q9UKN1 5478 aa3.35□□□□□ -1.87
SHROOM4-201ENST00000289292 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
SHROOM4-201ENST00000289292 KRTAP5-9P26371 169 aa3.26□□□□□ -1.89
SHROOM4-201ENST00000289292 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
SHROOM4-201ENST00000289292 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
SHROOM4-201ENST00000289292 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
SHROOM4-201ENST00000289292 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
SHROOM4-201ENST00000289292 NEBP20929 6669 aa3.1□□□□□ -1.91
SHROOM4-201ENST00000289292 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
SHROOM4-201ENST00000289292 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
SHROOM4-201ENST00000289292 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
SHROOM4-201ENST00000289292 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
SHROOM4-201ENST00000289292 MUC5ACP98088 5654 aa2.57□□□□□ -2
SHROOM4-201ENST00000289292 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
SHROOM4-201ENST00000289292 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
SHROOM4-201ENST00000289292 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
SHROOM4-201ENST00000289292 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
SHROOM4-201ENST00000289292 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
SHROOM4-201ENST00000289292 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
SHROOM4-201ENST00000289292 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
SHROOM4-201ENST00000289292 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
SHROOM4-201ENST00000289292 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
SHROOM4-201ENST00000289292 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
SHROOM4-201ENST00000289292 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
SHROOM4-201ENST00000289292 AHNAK2Q8IVF2 5795 aa2.01□□□□□ -2.09
SHROOM4-201ENST00000289292 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
SHROOM4-201ENST00000289292 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
SHROOM4-201ENST00000289292 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
SHROOM4-201ENST00000289292 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 981.8 ms