RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 KRTAP2-1Q9BYU5 128 aa7.68□□□□□ -1.18
RAB28-201ENST00000288723 ROMO1P60602 79 aa7.62□□□□□ -1.19
RAB28-201ENST00000288723 MT1EP04732 61 aa7.62□□□□□ -1.19
RAB28-201ENST00000288723 LCE3BQ5TA77 95 aa7.62□□□□□ -1.19
RAB28-201ENST00000288723 C10orf95Q9H7T3 257 aa7.56□□□□□ -1.2
RAB28-201ENST00000288723 KRTAP19-5Q3LI72 72 aa7.55□□□□□ -1.2
RAB28-201ENST00000288723 LCE5AQ5TCM9 118 aa7.52□□□□□ -1.21
RAB28-201ENST00000288723 KRTAP19-3Q7Z4W3 81 aa7.52□□□□□ -1.21
RAB28-201ENST00000288723 K7ERS5 55 aa7.5□□□□□ -1.21
RAB28-201ENST00000288723 TNP1P09430 55 aa7.47□□□□□ -1.21
RAB28-201ENST00000288723 LCE3AQ5TA76 89 aa7.43□□□□□ -1.22
RAB28-201ENST00000288723 DSTQ03001 7570 aaKnown RBP7.42□□□□□ -1.22
RAB28-201ENST00000288723 MT1GP13640 62 aa7.34□□□□□ -1.23
RAB28-201ENST00000288723 MT1LQ93083 61 aa7.3□□□□□ -1.24
RAB28-201ENST00000288723 PP632Q6XCG6 107 aa7.26□□□□□ -1.25
RAB28-201ENST00000288723 MT1MQ8N339 61 aa7.24□□□□□ -1.25
RAB28-201ENST00000288723 KRTAP4-3Q9BYR4 195 aa7.13□□□□□ -1.27
RAB28-201ENST00000288723 KRTAP12-3P60328 96 aa7.13□□□□□ -1.27
RAB28-201ENST00000288723 KRTAP15-1Q3LI76 137 aa7.11□□□□□ -1.27
RAB28-201ENST00000288723 KRTAP4-9Q9BYQ8 210 aa7.11□□□□□ -1.27
RAB28-201ENST00000288723 KRTAP4-7Q9BYR0 210 aa7.02□□□□□ -1.29
RAB28-201ENST00000288723 NDUFAF8A1L188 74 aa7.01□□□□□ -1.29
RAB28-201ENST00000288723 LCE1DQ5T752 114 aa6.92□□□□□ -1.3
RAB28-201ENST00000288723 LCE4AQ5TA78 99 aa6.9□□□□□ -1.31
RAB28-201ENST00000288723 MT4P47944 62 aa6.88□□□□□ -1.31
RAB28-201ENST00000288723 KRTAP5-4Q6L8H1 288 aa6.81□□□□□ -1.32
RAB28-201ENST00000288723 HMCN1Q96RW7 5635 aa6.8□□□□□ -1.32
RAB28-201ENST00000288723 KRTAP23-1A1A580 65 aa6.79□□□□□ -1.32
RAB28-201ENST00000288723 GPR98Q8WXG9 6306 aa6.71□□□□□ -1.33
RAB28-201ENST00000288723 KRTAP4-6Q9BYQ5 205 aa6.7□□□□□ -1.34
RAB28-201ENST00000288723 A0A0A0MQY5 61 aa6.64□□□□□ -1.35
RAB28-201ENST00000288723 LOC100996750A0A140TA64 210 aa6.64□□□□□ -1.35
RAB28-201ENST00000288723 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
RAB28-201ENST00000288723 KRTAP5-5Q701N2 237 aaPredicted RBP6.62□□□□□ -1.35
RAB28-201ENST00000288723 LCE3CQ5T5A8 94 aa6.58□□□□□ -1.36
RAB28-201ENST00000288723 LUZP6Q538Z0 58 aa6.57□□□□□ -1.36
RAB28-201ENST00000288723 AHNAK2Q8IVF2 5795 aa6.47□□□□□ -1.37
RAB28-201ENST00000288723 KRTAP20-2Q3LI61 65 aa6.43□□□□□ -1.38
RAB28-201ENST00000288723 KRTAP12-4P60329 112 aa6.4□□□□□ -1.38
RAB28-201ENST00000288723 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
RAB28-201ENST00000288723 SYNE1Q8NF91 8797 aaKnown RBP6.35□□□□□ -1.39
RAB28-201ENST00000288723 KRTAP5-10Q6L8G5 202 aa6.34□□□□□ -1.4
RAB28-201ENST00000288723 KRTAP9-6A8MVA2 160 aa6.25□□□□□ -1.41
RAB28-201ENST00000288723 KRTAP5-3Q6L8H2 238 aa6.24□□□□□ -1.41
RAB28-201ENST00000288723 MT1AP04731 61 aa6.19□□□□□ -1.42
RAB28-201ENST00000288723 KRTAP6-1Q3LI64 71 aa6.19□□□□□ -1.42
RAB28-201ENST00000288723 KRTAP5-7Q6L8G8 165 aa6.06□□□□□ -1.44
RAB28-201ENST00000288723 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
RAB28-201ENST00000288723 KRTAP5-2Q701N4 177 aa5.98□□□□□ -1.45
RAB28-201ENST00000288723 KRTAP6-2Q3LI66 62 aa5.89□□□□□ -1.47
RAB28-201ENST00000288723 KRTAP4-11Q9BYQ6 195 aa5.85□□□□□ -1.47
RAB28-201ENST00000288723 INE1O15225 51 aa5.84□□□□□ -1.47
RAB28-201ENST00000288723 OBSCNQ5VST9 7968 aa5.71□□□□□ -1.5
RAB28-201ENST00000288723 MT3P25713 68 aa5.66□□□□□ -1.5
RAB28-201ENST00000288723 KRTAP5-8O75690 187 aa5.65□□□□□ -1.5
RAB28-201ENST00000288723 KRTAP5-1Q6L8H4 278 aa5.37□□□□□ -1.55
RAB28-201ENST00000288723 MUC5BQ9HC84 5762 aaPredicted RBP5.32□□□□□ -1.56
RAB28-201ENST00000288723 KRTAP9-9Q9BYP9 154 aa5.32□□□□□ -1.56
RAB28-201ENST00000288723 MUC5ACP98088 5654 aa5.28□□□□□ -1.56
RAB28-201ENST00000288723 AHNAKQ09666 5890 aaKnown RBP5.25□□□□□ -1.57
RAB28-201ENST00000288723 LCE1EQ5T753 118 aa5.13□□□□□ -1.59
RAB28-201ENST00000288723 KRTAP4-12Q9BQ66 201 aa4.94□□□□□ -1.62
RAB28-201ENST00000288723 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.62
RAB28-201ENST00000288723 KRTAP4-2Q9BYR5 136 aa4.89□□□□□ -1.63
RAB28-201ENST00000288723 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
RAB28-201ENST00000288723 LCE3DQ9BYE3 92 aa4.76□□□□□ -1.65
RAB28-201ENST00000288723 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
RAB28-201ENST00000288723 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.35□□□□□ -1.71
RAB28-201ENST00000288723 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
RAB28-201ENST00000288723 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
RAB28-201ENST00000288723 KRTAP21-2Q3LI59 83 aa4.06□□□□□ -1.76
RAB28-201ENST00000288723 PRM1P04553 51 aa3.91□□□□□ -1.78
RAB28-201ENST00000288723 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
RAB28-201ENST00000288723 PHGR1C9JFL3 82 aa3.74□□□□□ -1.81
RAB28-201ENST00000288723 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
RAB28-201ENST00000288723 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
RAB28-201ENST00000288723 MUC16Q8WXI7 14507 aa2.41□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 7 ms