RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 SPRR2DP22532 72 aa7.34□□□□□ -1.23
TIMP4-201ENST00000287814 ROMO1P60602 79 aa7.33□□□□□ -1.24
TIMP4-201ENST00000287814 KRTAP2-3P0C7H8 128 aa7.32□□□□□ -1.24
TIMP4-201ENST00000287814 KRTAP2-4Q9BYR9 128 aa7.32□□□□□ -1.24
TIMP4-201ENST00000287814 KRTAP19-3Q7Z4W3 81 aa7.23□□□□□ -1.25
TIMP4-201ENST00000287814 LCE5AQ5TCM9 118 aa7.22□□□□□ -1.25
TIMP4-201ENST00000287814 KRTAP25-1Q3LHN0 102 aa7.17□□□□□ -1.26
TIMP4-201ENST00000287814 LCE3BQ5TA77 95 aa7.12□□□□□ -1.27
TIMP4-201ENST00000287814 KRTAP2-2Q9BYT5 123 aa7.12□□□□□ -1.27
TIMP4-201ENST00000287814 KRTAP2-1Q9BYU5 128 aa7.12□□□□□ -1.27
TIMP4-201ENST00000287814 MT1LQ93083 61 aa7.1□□□□□ -1.27
TIMP4-201ENST00000287814 MT1GP13640 62 aa7.09□□□□□ -1.27
TIMP4-201ENST00000287814 KRTAP12-3P60328 96 aa7.04□□□□□ -1.28
TIMP4-201ENST00000287814 DSTQ03001 7570 aaKnown RBP7.02□□□□□ -1.29
TIMP4-201ENST00000287814 MT1MQ8N339 61 aa7□□□□□ -1.29
TIMP4-201ENST00000287814 PP632Q6XCG6 107 aa6.98□□□□□ -1.29
TIMP4-201ENST00000287814 KRTAP23-1A1A580 65 aa6.91□□□□□ -1.3
TIMP4-201ENST00000287814 KRTAP4-3Q9BYR4 195 aa6.87□□□□□ -1.31
TIMP4-201ENST00000287814 KRTAP4-7Q9BYR0 210 aa6.83□□□□□ -1.32
TIMP4-201ENST00000287814 KRTAP15-1Q3LI76 137 aa6.69□□□□□ -1.34
TIMP4-201ENST00000287814 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
TIMP4-201ENST00000287814 KRTAP4-9Q9BYQ8 210 aa6.58□□□□□ -1.36
TIMP4-201ENST00000287814 LCE3CQ5T5A8 94 aa6.52□□□□□ -1.37
TIMP4-201ENST00000287814 LCE4AQ5TA78 99 aa6.49□□□□□ -1.37
TIMP4-201ENST00000287814 KRTAP5-4Q6L8H1 288 aa6.48□□□□□ -1.37
TIMP4-201ENST00000287814 LCE1DQ5T752 114 aa6.45□□□□□ -1.38
TIMP4-201ENST00000287814 LOC100996750A0A140TA64 210 aa6.45□□□□□ -1.38
TIMP4-201ENST00000287814 MT4P47944 62 aa6.42□□□□□ -1.38
TIMP4-201ENST00000287814 KRTAP5-5Q701N2 237 aaPredicted RBP6.39□□□□□ -1.39
TIMP4-201ENST00000287814 HMCN1Q96RW7 5635 aa6.34□□□□□ -1.39
TIMP4-201ENST00000287814 KRTAP4-6Q9BYQ5 205 aa6.31□□□□□ -1.4
TIMP4-201ENST00000287814 KRTAP9-6A8MVA2 160 aa6.21□□□□□ -1.42
TIMP4-201ENST00000287814 SYNE1Q8NF91 8797 aaKnown RBP6.12□□□□□ -1.43
TIMP4-201ENST00000287814 NDUFAF8A1L188 74 aa6.1□□□□□ -1.43
TIMP4-201ENST00000287814 KRTAP12-4P60329 112 aa6.09□□□□□ -1.43
TIMP4-201ENST00000287814 KRTAP20-2Q3LI61 65 aa6.09□□□□□ -1.43
TIMP4-201ENST00000287814 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
TIMP4-201ENST00000287814 GPR98Q8WXG9 6306 aa6.06□□□□□ -1.44
TIMP4-201ENST00000287814 MT1AP04731 61 aa6.03□□□□□ -1.44
TIMP4-201ENST00000287814 LUZP6Q538Z0 58 aa6.03□□□□□ -1.44
TIMP4-201ENST00000287814 KRTAP6-1Q3LI64 71 aa6.01□□□□□ -1.45
TIMP4-201ENST00000287814 H3BS24 57 aa5.98□□□□□ -1.45
TIMP4-201ENST00000287814 AHNAK2Q8IVF2 5795 aa5.96□□□□□ -1.45
TIMP4-201ENST00000287814 KRTAP5-3Q6L8H2 238 aa5.91□□□□□ -1.46
TIMP4-201ENST00000287814 KRTAP5-10Q6L8G5 202 aa5.82□□□□□ -1.48
TIMP4-201ENST00000287814 KRTAP9-4Q9BYQ2 154 aa5.81□□□□□ -1.48
TIMP4-201ENST00000287814 KRTAP5-2Q701N4 177 aa5.73□□□□□ -1.49
TIMP4-201ENST00000287814 KRTAP6-2Q3LI66 62 aa5.67□□□□□ -1.5
TIMP4-201ENST00000287814 KRTAP5-7Q6L8G8 165 aa5.53□□□□□ -1.52
TIMP4-201ENST00000287814 A0A0A0MQY5 61 aa5.51□□□□□ -1.53
TIMP4-201ENST00000287814 MT3P25713 68 aa5.48□□□□□ -1.53
TIMP4-201ENST00000287814 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
TIMP4-201ENST00000287814 OBSCNQ5VST9 7968 aa5.41□□□□□ -1.54
TIMP4-201ENST00000287814 KRTAP5-8O75690 187 aa5.3□□□□□ -1.56
TIMP4-201ENST00000287814 KRTAP5-1Q6L8H4 278 aa5.1□□□□□ -1.59
TIMP4-201ENST00000287814 INE1O15225 51 aa5.08□□□□□ -1.6
TIMP4-201ENST00000287814 LCE1EQ5T753 118 aa4.96□□□□□ -1.62
TIMP4-201ENST00000287814 MUC5ACP98088 5654 aa4.94□□□□□ -1.62
TIMP4-201ENST00000287814 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
TIMP4-201ENST00000287814 MUC5BQ9HC84 5762 aaPredicted RBP4.86□□□□□ -1.63
TIMP4-201ENST00000287814 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
TIMP4-201ENST00000287814 LCE3DQ9BYE3 92 aa4.76□□□□□ -1.65
TIMP4-201ENST00000287814 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
TIMP4-201ENST00000287814 LCE1BQ5T7P3 118 aa4.67□□□□□ -1.66
TIMP4-201ENST00000287814 LCE1CQ5T751 118 aa4.61□□□□□ -1.67
TIMP4-201ENST00000287814 LCE3EQ5T5B0 92 aa4.52□□□□□ -1.69
TIMP4-201ENST00000287814 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
TIMP4-201ENST00000287814 KRTAP4-12Q9BQ66 201 aa4.16□□□□□ -1.74
TIMP4-201ENST00000287814 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
TIMP4-201ENST00000287814 KRTAP21-2Q3LI59 83 aa3.96□□□□□ -1.78
TIMP4-201ENST00000287814 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
TIMP4-201ENST00000287814 PRM1P04553 51 aa3.84□□□□□ -1.8
TIMP4-201ENST00000287814 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
TIMP4-201ENST00000287814 PHGR1C9JFL3 82 aa3.58□□□□□ -1.84
TIMP4-201ENST00000287814 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
TIMP4-201ENST00000287814 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
TIMP4-201ENST00000287814 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 78.5 ms