RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 KRTAP19-6Q3LI70 58 aa4.46□□□□□ -1.69
SCAF4-201ENST00000286835 LOC100996750A0A140TA64 210 aa4.46□□□□□ -1.7
SCAF4-201ENST00000286835 MT1EP04732 61 aa4.45□□□□□ -1.7
SCAF4-201ENST00000286835 KRTAP4-3Q9BYR4 195 aa4.45□□□□□ -1.7
SCAF4-201ENST00000286835 FCGBPQ9Y6R7 5405 aaPredicted RBP4.44□□□□□ -1.7
SCAF4-201ENST00000286835 SPRR2EP22531 72 aa4.42□□□□□ -1.7
SCAF4-201ENST00000286835 SPRR2BP35325 72 aa4.42□□□□□ -1.7
SCAF4-201ENST00000286835 SPRR2AP35326 72 aa4.42□□□□□ -1.7
SCAF4-201ENST00000286835 KRTAP2-3P0C7H8 128 aa4.42□□□□□ -1.7
SCAF4-201ENST00000286835 KRTAP2-4Q9BYR9 128 aa4.42□□□□□ -1.7
SCAF4-201ENST00000286835 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
SCAF4-201ENST00000286835 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
SCAF4-201ENST00000286835 LCE2DQ5TA82 110 aaPredicted RBP4.35□□□□□ -1.71
SCAF4-201ENST00000286835 MUC12Q9UKN1 5478 aa4.31□□□□□ -1.72
SCAF4-201ENST00000286835 SSPOA2VEC9 5147 aa4.31□□□□□ -1.72
SCAF4-201ENST00000286835 LCE3BQ5TA77 95 aa4.31□□□□□ -1.72
SCAF4-201ENST00000286835 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
SCAF4-201ENST00000286835 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.73
SCAF4-201ENST00000286835 SYNE2Q8WXH0 6885 aaKnown RBP4.24□□□□□ -1.73
SCAF4-201ENST00000286835 SPRR2DP22532 72 aa4.24□□□□□ -1.73
SCAF4-201ENST00000286835 MACF1Q9UPN3 7388 aaKnown RBP4.21□□□□□ -1.74
SCAF4-201ENST00000286835 MT1MQ8N339 61 aa4.19□□□□□ -1.74
SCAF4-201ENST00000286835 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
SCAF4-201ENST00000286835 KRTAP9-6A0A140TA67 174 aa4.15□□□□□ -1.75
SCAF4-201ENST00000286835 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
SCAF4-201ENST00000286835 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.96□□□□□ -1.78
SCAF4-201ENST00000286835 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
SCAF4-201ENST00000286835 KRTAP9-7A8MTY7 169 aa3.92□□□□□ -1.78
SCAF4-201ENST00000286835 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.79
SCAF4-201ENST00000286835 PRM1P04553 51 aa3.89□□□□□ -1.79
SCAF4-201ENST00000286835 LCE5AQ5TCM9 118 aa3.89□□□□□ -1.79
SCAF4-201ENST00000286835 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
SCAF4-201ENST00000286835 MT4P47944 62 aa3.86□□□□□ -1.79
SCAF4-201ENST00000286835 MDN1Q9NU22 5596 aa3.85□□□□□ -1.79
SCAF4-201ENST00000286835 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.79
SCAF4-201ENST00000286835 MT1AP04731 61 aa3.75□□□□□ -1.81
SCAF4-201ENST00000286835 MT3P25713 68 aa3.66□□□□□ -1.82
SCAF4-201ENST00000286835 KRTAP5-9P26371 169 aa3.65□□□□□ -1.83
SCAF4-201ENST00000286835 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
SCAF4-201ENST00000286835 KRTAP20-1Q3LI63 56 aa3.59□□□□□ -1.84
SCAF4-201ENST00000286835 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
SCAF4-201ENST00000286835 NEBP20929 6669 aa3.52□□□□□ -1.85
SCAF4-201ENST00000286835 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
SCAF4-201ENST00000286835 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
SCAF4-201ENST00000286835 LCE1DQ5T752 114 aa3.47□□□□□ -1.85
SCAF4-201ENST00000286835 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
SCAF4-201ENST00000286835 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
SCAF4-201ENST00000286835 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
SCAF4-201ENST00000286835 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.87
SCAF4-201ENST00000286835 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
SCAF4-201ENST00000286835 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
SCAF4-201ENST00000286835 HMCN1Q96RW7 5635 aa3.02□□□□□ -1.93
SCAF4-201ENST00000286835 MUC5ACP98088 5654 aa3□□□□□ -1.93
SCAF4-201ENST00000286835 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
SCAF4-201ENST00000286835 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
SCAF4-201ENST00000286835 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
SCAF4-201ENST00000286835 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
SCAF4-201ENST00000286835 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
SCAF4-201ENST00000286835 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
SCAF4-201ENST00000286835 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
SCAF4-201ENST00000286835 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
SCAF4-201ENST00000286835 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
SCAF4-201ENST00000286835 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
SCAF4-201ENST00000286835 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
SCAF4-201ENST00000286835 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
SCAF4-201ENST00000286835 KRTAP4-2Q9BYR5 136 aa2.63□□□□□ -1.99
SCAF4-201ENST00000286835 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
SCAF4-201ENST00000286835 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
SCAF4-201ENST00000286835 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
SCAF4-201ENST00000286835 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
SCAF4-201ENST00000286835 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
SCAF4-201ENST00000286835 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
SCAF4-201ENST00000286835 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
SCAF4-201ENST00000286835 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
SCAF4-201ENST00000286835 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
SCAF4-201ENST00000286835 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
SCAF4-201ENST00000286835 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms