RNA–Protein interactions for RNA: ENST00000286628.13

KCNMA1-202, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 6,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-202ENST00000286628 KRTAP9-2Q9BYQ4 174 aa4.6□□□□□ -1.67
KCNMA1-202ENST00000286628 MT3P25713 68 aa4.59□□□□□ -1.67
KCNMA1-202ENST00000286628 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
KCNMA1-202ENST00000286628 TNXBP22105 4242 aa4.53□□□□□ -1.68
KCNMA1-202ENST00000286628 LCE2AQ5TA79 106 aaPredicted RBP4.53□□□□□ -1.68
KCNMA1-202ENST00000286628 MT4P47944 62 aa4.51□□□□□ -1.69
KCNMA1-202ENST00000286628 RNF213Q63HN8 5207 aa4.5□□□□□ -1.69
KCNMA1-202ENST00000286628 FAT4Q6V0I7 4981 aa4.49□□□□□ -1.69
KCNMA1-202ENST00000286628 LOC100996750A0A140TA64 210 aa4.48□□□□□ -1.69
KCNMA1-202ENST00000286628 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
KCNMA1-202ENST00000286628 KRTAP19-7Q3SYF9 63 aa4.45□□□□□ -1.7
KCNMA1-202ENST00000286628 HMCN2Q8NDA2 5059 aa4.4□□□□□ -1.71
KCNMA1-202ENST00000286628 MUC2Q02817 5179 aa4.38□□□□□ -1.71
KCNMA1-202ENST00000286628 PRM1P04553 51 aa4.34□□□□□ -1.71
KCNMA1-202ENST00000286628 MT1AP04731 61 aa4.34□□□□□ -1.71
KCNMA1-202ENST00000286628 KRTAP9-6A0A140TA67 174 aa4.33□□□□□ -1.72
KCNMA1-202ENST00000286628 LCE1BQ5T7P3 118 aa4.33□□□□□ -1.72
KCNMA1-202ENST00000286628 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
KCNMA1-202ENST00000286628 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
KCNMA1-202ENST00000286628 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
KCNMA1-202ENST00000286628 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
KCNMA1-202ENST00000286628 KRTAP2-1Q9BYU5 128 aa4.23□□□□□ -1.73
KCNMA1-202ENST00000286628 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
KCNMA1-202ENST00000286628 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
KCNMA1-202ENST00000286628 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
KCNMA1-202ENST00000286628 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
KCNMA1-202ENST00000286628 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
KCNMA1-202ENST00000286628 KRTAP6-3Q3LI67 103 aa4.13□□□□□ -1.75
KCNMA1-202ENST00000286628 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
KCNMA1-202ENST00000286628 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
KCNMA1-202ENST00000286628 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
KCNMA1-202ENST00000286628 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
KCNMA1-202ENST00000286628 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.99□□□□□ -1.77
KCNMA1-202ENST00000286628 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
KCNMA1-202ENST00000286628 LCE4AQ5TA78 99 aa3.96□□□□□ -1.77
KCNMA1-202ENST00000286628 FCGBPQ9Y6R7 5405 aaPredicted RBP3.92□□□□□ -1.78
KCNMA1-202ENST00000286628 USH2AO75445 5202 aa3.91□□□□□ -1.78
KCNMA1-202ENST00000286628 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
KCNMA1-202ENST00000286628 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
KCNMA1-202ENST00000286628 MACF1Q9UPN3 7388 aaKnown RBP3.78□□□□□ -1.8
KCNMA1-202ENST00000286628 KMT2DO14686 5537 aa3.67□□□□□ -1.82
KCNMA1-202ENST00000286628 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
KCNMA1-202ENST00000286628 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
KCNMA1-202ENST00000286628 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
KCNMA1-202ENST00000286628 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
KCNMA1-202ENST00000286628 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
KCNMA1-202ENST00000286628 NEBP20929 6669 aa3.48□□□□□ -1.85
KCNMA1-202ENST00000286628 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
KCNMA1-202ENST00000286628 KRTAP9-9Q9BYP9 154 aa3.44□□□□□ -1.86
KCNMA1-202ENST00000286628 SSPOA2VEC9 5147 aa3.43□□□□□ -1.86
KCNMA1-202ENST00000286628 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
KCNMA1-202ENST00000286628 KRTAP4-6Q9BYQ5 205 aa3.37□□□□□ -1.87
KCNMA1-202ENST00000286628 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
KCNMA1-202ENST00000286628 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
KCNMA1-202ENST00000286628 KRTAP4-11Q9BYQ6 195 aa3.21□□□□□ -1.9
KCNMA1-202ENST00000286628 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
KCNMA1-202ENST00000286628 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
KCNMA1-202ENST00000286628 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
KCNMA1-202ENST00000286628 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
KCNMA1-202ENST00000286628 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
KCNMA1-202ENST00000286628 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
KCNMA1-202ENST00000286628 HMCN1Q96RW7 5635 aa2.78□□□□□ -1.97
KCNMA1-202ENST00000286628 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
KCNMA1-202ENST00000286628 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
KCNMA1-202ENST00000286628 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
KCNMA1-202ENST00000286628 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
KCNMA1-202ENST00000286628 KRTAP5-10Q6L8G5 202 aa2.41□□□□□ -2.02
KCNMA1-202ENST00000286628 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
KCNMA1-202ENST00000286628 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
KCNMA1-202ENST00000286628 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
KCNMA1-202ENST00000286628 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
KCNMA1-202ENST00000286628 KRTAP5-1Q6L8H4 278 aa2.13□□□□□ -2.07
KCNMA1-202ENST00000286628 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
KCNMA1-202ENST00000286628 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
KCNMA1-202ENST00000286628 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
KCNMA1-202ENST00000286628 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
KCNMA1-202ENST00000286628 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 58.3 ms