RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 MT1LQ93083 61 aa6.71□□□□□ -1.34
VBP1-201ENST00000286428 MT1GP13640 62 aa6.55□□□□□ -1.36
VBP1-201ENST00000286428 KRTAP19-3Q7Z4W3 81 aa6.55□□□□□ -1.36
VBP1-201ENST00000286428 SPRR2FQ96RM1 72 aa6.55□□□□□ -1.36
VBP1-201ENST00000286428 MACF1Q9UPN3 7388 aaKnown RBP6.52□□□□□ -1.37
VBP1-201ENST00000286428 KRTAP4-7Q9BYR0 210 aa6.43□□□□□ -1.38
VBP1-201ENST00000286428 KRTAP5-9P26371 169 aa6.42□□□□□ -1.38
VBP1-201ENST00000286428 MT1MQ8N339 61 aa6.39□□□□□ -1.39
VBP1-201ENST00000286428 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.39□□□□□ -1.39
VBP1-201ENST00000286428 LCE5AQ5TCM9 118 aa6.38□□□□□ -1.39
VBP1-201ENST00000286428 KRTAP9-6A8MVA2 160 aa6.3□□□□□ -1.4
VBP1-201ENST00000286428 SYNE2Q8WXH0 6885 aaKnown RBP6.28□□□□□ -1.4
VBP1-201ENST00000286428 KRTAP9-7A8MTY7 169 aa6.27□□□□□ -1.41
VBP1-201ENST00000286428 MUC12Q9UKN1 5478 aa6.27□□□□□ -1.41
VBP1-201ENST00000286428 KRTAP6-3Q3LI67 103 aa6.23□□□□□ -1.41
VBP1-201ENST00000286428 LCE1AQ5T7P2 110 aa6.2□□□□□ -1.42
VBP1-201ENST00000286428 INE1O15225 51 aa6.19□□□□□ -1.42
VBP1-201ENST00000286428 KRTAP4-3Q9BYR4 195 aa6.18□□□□□ -1.42
VBP1-201ENST00000286428 SPRR2EP22531 72 aa6.17□□□□□ -1.42
VBP1-201ENST00000286428 SPRR2BP35325 72 aa6.17□□□□□ -1.42
VBP1-201ENST00000286428 SPRR2AP35326 72 aa6.17□□□□□ -1.42
VBP1-201ENST00000286428 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
VBP1-201ENST00000286428 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
VBP1-201ENST00000286428 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
VBP1-201ENST00000286428 MDN1Q9NU22 5596 aa5.99□□□□□ -1.45
VBP1-201ENST00000286428 SPRR2DP22532 72 aa5.94□□□□□ -1.46
VBP1-201ENST00000286428 DSTQ03001 7570 aaKnown RBP5.87□□□□□ -1.47
VBP1-201ENST00000286428 LCE3BQ5TA77 95 aa5.79□□□□□ -1.48
VBP1-201ENST00000286428 KRTAP5-5Q701N2 237 aaPredicted RBP5.73□□□□□ -1.49
VBP1-201ENST00000286428 MT1AP04731 61 aa5.72□□□□□ -1.49
VBP1-201ENST00000286428 KRTAP4-12Q9BQ66 201 aa5.69□□□□□ -1.5
VBP1-201ENST00000286428 KRTAP9-9Q9BYP9 154 aa5.69□□□□□ -1.5
VBP1-201ENST00000286428 KRTAP9-4Q9BYQ2 154 aa5.69□□□□□ -1.5
VBP1-201ENST00000286428 NEBP20929 6669 aa5.66□□□□□ -1.5
VBP1-201ENST00000286428 KRTAP6-1Q3LI64 71 aa5.61□□□□□ -1.51
VBP1-201ENST00000286428 KRTAP5-3Q6L8H2 238 aa5.55□□□□□ -1.52
VBP1-201ENST00000286428 KRTAP20-1Q3LI63 56 aa5.51□□□□□ -1.53
VBP1-201ENST00000286428 LCE1DQ5T752 114 aa5.4□□□□□ -1.55
VBP1-201ENST00000286428 SYNE1Q8NF91 8797 aaKnown RBP5.4□□□□□ -1.55
VBP1-201ENST00000286428 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
VBP1-201ENST00000286428 KRTAP5-4Q6L8H1 288 aa5.39□□□□□ -1.55
VBP1-201ENST00000286428 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
VBP1-201ENST00000286428 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
VBP1-201ENST00000286428 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
VBP1-201ENST00000286428 KRTAP4-2Q9BYR5 136 aa5.25□□□□□ -1.57
VBP1-201ENST00000286428 MT3P25713 68 aa5.24□□□□□ -1.57
VBP1-201ENST00000286428 LCE3DQ9BYE3 92 aa5.16□□□□□ -1.58
VBP1-201ENST00000286428 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.58
VBP1-201ENST00000286428 MT4P47944 62 aa5.12□□□□□ -1.59
VBP1-201ENST00000286428 LCE3EQ5T5B0 92 aa5.05□□□□□ -1.6
VBP1-201ENST00000286428 KRTAP4-11Q9BYQ6 195 aa5.04□□□□□ -1.6
VBP1-201ENST00000286428 KRTAP20-2Q3LI61 65 aa5.03□□□□□ -1.6
VBP1-201ENST00000286428 KRTAP5-2Q701N4 177 aa4.92□□□□□ -1.62
VBP1-201ENST00000286428 HMCN1Q96RW7 5635 aa4.8□□□□□ -1.64
VBP1-201ENST00000286428 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
VBP1-201ENST00000286428 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
VBP1-201ENST00000286428 PRM1P04553 51 aa4.45□□□□□ -1.7
VBP1-201ENST00000286428 GPR98Q8WXG9 6306 aa4.4□□□□□ -1.7
VBP1-201ENST00000286428 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.71
VBP1-201ENST00000286428 KRTAP5-10Q6L8G5 202 aa4.29□□□□□ -1.72
VBP1-201ENST00000286428 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
VBP1-201ENST00000286428 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
VBP1-201ENST00000286428 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
VBP1-201ENST00000286428 KRTAP5-8O75690 187 aa4.13□□□□□ -1.75
VBP1-201ENST00000286428 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.76
VBP1-201ENST00000286428 MUC5ACP98088 5654 aa4.04□□□□□ -1.76
VBP1-201ENST00000286428 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
VBP1-201ENST00000286428 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
VBP1-201ENST00000286428 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.82
VBP1-201ENST00000286428 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
VBP1-201ENST00000286428 AHNAKQ09666 5890 aaKnown RBP3.47□□□□□ -1.85
VBP1-201ENST00000286428 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
VBP1-201ENST00000286428 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
VBP1-201ENST00000286428 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
VBP1-201ENST00000286428 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
VBP1-201ENST00000286428 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
VBP1-201ENST00000286428 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 140.4 ms