RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 MT1EP04732 61 aa1.29□□□□□ -2.2
SCN3A-201ENST00000283254 USH2AO75445 5202 aa1.29□□□□□ -2.2
SCN3A-201ENST00000283254 LRP2P98164 4655 aa1.28□□□□□ -2.2
SCN3A-201ENST00000283254 MT1MQ8N339 61 aa1.28□□□□□ -2.2
SCN3A-201ENST00000283254 KRTAP19-6Q3LI70 58 aa1.28□□□□□ -2.2
SCN3A-201ENST00000283254 KRTAP4-8A0A0G2JLE6 195 aa1.27□□□□□ -2.21
SCN3A-201ENST00000283254 KRTAP4-8Q9BYQ9 185 aa1.27□□□□□ -2.21
SCN3A-201ENST00000283254 MT4P47944 62 aa1.26□□□□□ -2.21
SCN3A-201ENST00000283254 MUC12Q9UKN1 5478 aa1.25□□□□□ -2.21
SCN3A-201ENST00000283254 KRTAP19-2Q3LHN2 52 aa1.25□□□□□ -2.21
SCN3A-201ENST00000283254 KRTAP9-2Q9BYQ4 174 aa1.25□□□□□ -2.21
SCN3A-201ENST00000283254 LCE1DQ5T752 114 aa1.24□□□□□ -2.21
SCN3A-201ENST00000283254 MT1AP04731 61 aa1.23□□□□□ -2.21
SCN3A-201ENST00000283254 SSPOA2VEC9 5147 aa1.23□□□□□ -2.21
SCN3A-201ENST00000283254 KRTAP20-1Q3LI63 56 aa1.23□□□□□ -2.21
SCN3A-201ENST00000283254 LCE1BQ5T7P3 118 aa1.23□□□□□ -2.21
SCN3A-201ENST00000283254 KRTAP9-6A0A140TA67 174 aa1.23□□□□□ -2.21
SCN3A-201ENST00000283254 HMCN1Q96RW7 5635 aa1.22□□□□□ -2.21
SCN3A-201ENST00000283254 LCE1AQ5T7P2 110 aa1.22□□□□□ -2.21
SCN3A-201ENST00000283254 LCE2AQ5TA79 106 aaPredicted RBP1.2□□□□□ -2.22
SCN3A-201ENST00000283254 SYNE2Q8WXH0 6885 aaKnown RBP1.2□□□□□ -2.22
SCN3A-201ENST00000283254 PRM1P04553 51 aa1.19□□□□□ -2.22
SCN3A-201ENST00000283254 FSIP2Q5CZC0 6907 aa1.18□□□□□ -2.22
SCN3A-201ENST00000283254 KRTAP6-3Q3LI67 103 aa1.18□□□□□ -2.22
SCN3A-201ENST00000283254 KRTAP2-3P0C7H8 128 aa1.17□□□□□ -2.22
SCN3A-201ENST00000283254 KRTAP2-4Q9BYR9 128 aa1.17□□□□□ -2.22
SCN3A-201ENST00000283254 KRTAP4-7Q9BYR0 210 aa1.17□□□□□ -2.22
SCN3A-201ENST00000283254 KRTAP9-7A8MTY7 169 aa1.16□□□□□ -2.22
SCN3A-201ENST00000283254 KRTAP2-1Q9BYU5 128 aa1.16□□□□□ -2.22
SCN3A-201ENST00000283254 LCE4AQ5TA78 99 aa1.16□□□□□ -2.22
SCN3A-201ENST00000283254 MDN1Q9NU22 5596 aa1.16□□□□□ -2.22
SCN3A-201ENST00000283254 LCE5AQ5TCM9 118 aa1.16□□□□□ -2.22
SCN3A-201ENST00000283254 AHNAK2Q8IVF2 5795 aa1.14□□□□□ -2.23
SCN3A-201ENST00000283254 KRTAP19-7Q3SYF9 63 aa1.14□□□□□ -2.23
SCN3A-201ENST00000283254 MUC5BQ9HC84 5762 aaPredicted RBP1.13□□□□□ -2.23
SCN3A-201ENST00000283254 FCGBPQ9Y6R7 5405 aaPredicted RBP1.13□□□□□ -2.23
SCN3A-201ENST00000283254 KRTAP2-2Q9BYT5 123 aa1.12□□□□□ -2.23
SCN3A-201ENST00000283254 KMT2DO14686 5537 aa1.11□□□□□ -2.23
SCN3A-201ENST00000283254 LOC100996750A0A140TA64 210 aa1.1□□□□□ -2.23
SCN3A-201ENST00000283254 MACF1Q9UPN3 7388 aaKnown RBP1.1□□□□□ -2.23
SCN3A-201ENST00000283254 LCE1CQ5T751 118 aa1.09□□□□□ -2.23
SCN3A-201ENST00000283254 LCE1EQ5T753 118 aa1.09□□□□□ -2.23
SCN3A-201ENST00000283254 LCE1FQ5T754 118 aa1.09□□□□□ -2.23
SCN3A-201ENST00000283254 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.09□□□□□ -2.23
SCN3A-201ENST00000283254 NEBP20929 6669 aa1.08□□□□□ -2.24
SCN3A-201ENST00000283254 KRTAP4-3Q9BYR4 195 aa1.08□□□□□ -2.24
SCN3A-201ENST00000283254 KRTAP6-2Q3LI66 62 aa1.08□□□□□ -2.24
SCN3A-201ENST00000283254 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.08□□□□□ -2.24
SCN3A-201ENST00000283254 KRTAP9-4Q9BYQ2 154 aa1.06□□□□□ -2.24
SCN3A-201ENST00000283254 KRTAP9-9Q9BYP9 154 aa1.06□□□□□ -2.24
SCN3A-201ENST00000283254 KRTAP6-1Q3LI64 71 aa1.05□□□□□ -2.24
SCN3A-201ENST00000283254 OBSCNQ5VST9 7968 aa1.04□□□□□ -2.24
SCN3A-201ENST00000283254 KRTAP4-6Q9BYQ5 205 aa1.04□□□□□ -2.24
SCN3A-201ENST00000283254 KRTAP4-9Q9BYQ8 210 aa1.02□□□□□ -2.25
SCN3A-201ENST00000283254 AHNAKQ09666 5890 aaKnown RBP1.01□□□□□ -2.25
SCN3A-201ENST00000283254 MUC19Q7Z5P9 8384 aa1.01□□□□□ -2.25
SCN3A-201ENST00000283254 KRTAP5-9P26371 169 aa1.01□□□□□ -2.25
SCN3A-201ENST00000283254 KRTAP9-6A8MVA2 160 aa1.01□□□□□ -2.25
SCN3A-201ENST00000283254 DSTQ03001 7570 aaKnown RBP0.99□□□□□ -2.25
SCN3A-201ENST00000283254 KRTAP5-5Q701N2 237 aaPredicted RBP0.98□□□□□ -2.25
SCN3A-201ENST00000283254 KRTAP5-3Q6L8H2 238 aa0.95□□□□□ -2.26
SCN3A-201ENST00000283254 KRTAP20-2Q3LI61 65 aa0.9□□□□□ -2.27
SCN3A-201ENST00000283254 KRTAP5-4Q6L8H1 288 aa0.86□□□□□ -2.27
SCN3A-201ENST00000283254 KRTAP4-11Q9BYQ6 195 aa0.86□□□□□ -2.27
SCN3A-201ENST00000283254 MUC5ACP98088 5654 aa0.84□□□□□ -2.28
SCN3A-201ENST00000283254 KRTAP4-2Q9BYR5 136 aa0.82□□□□□ -2.28
SCN3A-201ENST00000283254 KRTAP4-12Q9BQ66 201 aa0.81□□□□□ -2.28
SCN3A-201ENST00000283254 KRTAP4-4Q9BYR3 166 aa0.78□□□□□ -2.28
SCN3A-201ENST00000283254 KRTAP5-8O75690 187 aa0.73□□□□□ -2.29
SCN3A-201ENST00000283254 KRTAP5-7Q6L8G8 165 aa0.71□□□□□ -2.3
SCN3A-201ENST00000283254 PHGR1C9JFL3 82 aa0.67□□□□□ -2.3
SCN3A-201ENST00000283254 KRTAP5-10Q6L8G5 202 aa0.66□□□□□ -2.3
SCN3A-201ENST00000283254 KRTAP5-11Q6L8G4 156 aa0.62□□□□□ -2.31
SCN3A-201ENST00000283254 KRTAP5-1Q6L8H4 278 aa0.62□□□□□ -2.31
SCN3A-201ENST00000283254 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
SCN3A-201ENST00000283254 KRTAP21-2Q3LI59 83 aa0.52□□□□□ -2.33
SCN3A-201ENST00000283254 MUC16Q8WXI7 14507 aa0.37□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 179.1 ms