RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
VPS26B-201ENST00000281187 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
VPS26B-201ENST00000281187 MT1LQ93083 61 aa4.72□□□□□ -1.65
VPS26B-201ENST00000281187 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
VPS26B-201ENST00000281187 KRTAP2-1Q9BYU5 128 aa4.72□□□□□ -1.65
VPS26B-201ENST00000281187 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
VPS26B-201ENST00000281187 MT1EP04732 61 aa4.65□□□□□ -1.66
VPS26B-201ENST00000281187 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
VPS26B-201ENST00000281187 KRTAP19-4Q3LI73 84 aa4.5□□□□□ -1.69
VPS26B-201ENST00000281187 MUC12Q9UKN1 5478 aa4.5□□□□□ -1.69
VPS26B-201ENST00000281187 KRTAP4-9Q9BYQ8 210 aa4.46□□□□□ -1.7
VPS26B-201ENST00000281187 SPRR2FQ96RM1 72 aa4.46□□□□□ -1.7
VPS26B-201ENST00000281187 MT1MQ8N339 61 aa4.38□□□□□ -1.71
VPS26B-201ENST00000281187 KRTAP19-3Q7Z4W3 81 aa4.37□□□□□ -1.71
VPS26B-201ENST00000281187 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
VPS26B-201ENST00000281187 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
VPS26B-201ENST00000281187 SSPOA2VEC9 5147 aa4.27□□□□□ -1.73
VPS26B-201ENST00000281187 PRM1P04553 51 aa4.25□□□□□ -1.73
VPS26B-201ENST00000281187 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
VPS26B-201ENST00000281187 KRTAP9-7A8MTY7 169 aa4.15□□□□□ -1.74
VPS26B-201ENST00000281187 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.74
VPS26B-201ENST00000281187 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.75
VPS26B-201ENST00000281187 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
VPS26B-201ENST00000281187 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
VPS26B-201ENST00000281187 MT1AP04731 61 aa3.94□□□□□ -1.78
VPS26B-201ENST00000281187 MACF1Q9UPN3 7388 aaKnown RBP3.93□□□□□ -1.78
VPS26B-201ENST00000281187 SPRR2EP22531 72 aa3.92□□□□□ -1.78
VPS26B-201ENST00000281187 SPRR2BP35325 72 aa3.92□□□□□ -1.78
VPS26B-201ENST00000281187 SPRR2AP35326 72 aa3.92□□□□□ -1.78
VPS26B-201ENST00000281187 KRTAP6-2Q3LI66 62 aa3.91□□□□□ -1.78
VPS26B-201ENST00000281187 MDN1Q9NU22 5596 aa3.84□□□□□ -1.79
VPS26B-201ENST00000281187 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
VPS26B-201ENST00000281187 SPRR2DP22532 72 aa3.72□□□□□ -1.81
VPS26B-201ENST00000281187 MT3P25713 68 aa3.72□□□□□ -1.81
VPS26B-201ENST00000281187 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
VPS26B-201ENST00000281187 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
VPS26B-201ENST00000281187 KRTAP9-6A0A140TA67 174 aa3.63□□□□□ -1.83
VPS26B-201ENST00000281187 KRTAP2-2Q9BYT5 123 aa3.6□□□□□ -1.83
VPS26B-201ENST00000281187 KRTAP6-3Q3LI67 103 aa3.53□□□□□ -1.84
VPS26B-201ENST00000281187 MT4P47944 62 aa3.48□□□□□ -1.85
VPS26B-201ENST00000281187 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
VPS26B-201ENST00000281187 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.87
VPS26B-201ENST00000281187 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
VPS26B-201ENST00000281187 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
VPS26B-201ENST00000281187 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
VPS26B-201ENST00000281187 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
VPS26B-201ENST00000281187 KRTAP5-9P26371 169 aa3.28□□□□□ -1.88
VPS26B-201ENST00000281187 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
VPS26B-201ENST00000281187 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
VPS26B-201ENST00000281187 KRTAP4-6Q9BYQ5 205 aa3.2□□□□□ -1.9
VPS26B-201ENST00000281187 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.02□□□□□ -1.93
VPS26B-201ENST00000281187 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
VPS26B-201ENST00000281187 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
VPS26B-201ENST00000281187 NEBP20929 6669 aa2.9□□□□□ -1.95
VPS26B-201ENST00000281187 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
VPS26B-201ENST00000281187 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.96
VPS26B-201ENST00000281187 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.96
VPS26B-201ENST00000281187 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
VPS26B-201ENST00000281187 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
VPS26B-201ENST00000281187 KRTAP20-1Q3LI63 56 aa2.65□□□□□ -1.98
VPS26B-201ENST00000281187 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
VPS26B-201ENST00000281187 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
VPS26B-201ENST00000281187 KRTAP4-2Q9BYR5 136 aa2.51□□□□□ -2.01
VPS26B-201ENST00000281187 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
VPS26B-201ENST00000281187 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
VPS26B-201ENST00000281187 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
VPS26B-201ENST00000281187 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
VPS26B-201ENST00000281187 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.04
VPS26B-201ENST00000281187 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
VPS26B-201ENST00000281187 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
VPS26B-201ENST00000281187 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
VPS26B-201ENST00000281187 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
VPS26B-201ENST00000281187 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
VPS26B-201ENST00000281187 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
VPS26B-201ENST00000281187 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.12
VPS26B-201ENST00000281187 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
VPS26B-201ENST00000281187 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms