RNA–Protein interactions for RNA: ENST00000279804.2

CTF1-201, Transcript of cardiotrophin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTF1, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-201ENST00000279804 LCE1AQ5T7P2 110 aa8.86□□□□□ -0.99
CTF1-201ENST00000279804 KRTAP19-5Q3LI72 72 aa8.8□□□□□ -1
CTF1-201ENST00000279804 MT1EP04732 61 aa8.75□□□□□ -1.01
CTF1-201ENST00000279804 KRTAP12-3P60328 96 aa8.61□□□□□ -1.03
CTF1-201ENST00000279804 SPRR2DP22532 72 aa8.59□□□□□ -1.03
CTF1-201ENST00000279804 KRTAP19-3Q7Z4W3 81 aa8.56□□□□□ -1.04
CTF1-201ENST00000279804 KRTAP20-1Q3LI63 56 aa8.55□□□□□ -1.04
CTF1-201ENST00000279804 LCE5AQ5TCM9 118 aa8.51□□□□□ -1.05
CTF1-201ENST00000279804 MT1LQ93083 61 aa8.46□□□□□ -1.06
CTF1-201ENST00000279804 KRTAP2-3P0C7H8 128 aa8.45□□□□□ -1.06
CTF1-201ENST00000279804 KRTAP2-4Q9BYR9 128 aa8.45□□□□□ -1.06
CTF1-201ENST00000279804 MT1GP13640 62 aa8.4□□□□□ -1.07
CTF1-201ENST00000279804 LCE3BQ5TA77 95 aa8.32□□□□□ -1.08
CTF1-201ENST00000279804 KRTAP15-1Q3LI76 137 aa8.31□□□□□ -1.08
CTF1-201ENST00000279804 MT1MQ8N339 61 aa8.3□□□□□ -1.08
CTF1-201ENST00000279804 KRTAP2-2Q9BYT5 123 aa8.21□□□□□ -1.09
CTF1-201ENST00000279804 KRTAP2-1Q9BYU5 128 aa8.21□□□□□ -1.09
CTF1-201ENST00000279804 DSTQ03001 7570 aaKnown RBP8.19□□□□□ -1.1
CTF1-201ENST00000279804 KRTAP4-3Q9BYR4 195 aa8.16□□□□□ -1.1
CTF1-201ENST00000279804 KRTAP4-7Q9BYR0 210 aa8.15□□□□□ -1.1
CTF1-201ENST00000279804 KRTAP19-4Q3LI73 84 aa8.01□□□□□ -1.13
CTF1-201ENST00000279804 LCE3CQ5T5A8 94 aa8.01□□□□□ -1.13
CTF1-201ENST00000279804 SPRR5A0A1B0GTR4 108 aa7.99□□□□□ -1.13
CTF1-201ENST00000279804 LUZP6Q538Z0 58 aa7.84□□□□□ -1.15
CTF1-201ENST00000279804 LOC100996750A0A140TA64 210 aa7.7□□□□□ -1.18
CTF1-201ENST00000279804 KRTAP4-9Q9BYQ8 210 aa7.65□□□□□ -1.18
CTF1-201ENST00000279804 NDUFAF8A1L188 74 aa7.64□□□□□ -1.19
CTF1-201ENST00000279804 KRTAP9-6A8MVA2 160 aa7.63□□□□□ -1.19
CTF1-201ENST00000279804 LCE4AQ5TA78 99 aa7.58□□□□□ -1.2
CTF1-201ENST00000279804 KRTAP5-4Q6L8H1 288 aa7.57□□□□□ -1.2
CTF1-201ENST00000279804 KRTAP5-5Q701N2 237 aaPredicted RBP7.55□□□□□ -1.2
CTF1-201ENST00000279804 H3BS24 57 aa7.54□□□□□ -1.2
CTF1-201ENST00000279804 MT4P47944 62 aa7.51□□□□□ -1.21
CTF1-201ENST00000279804 LCE1DQ5T752 114 aa7.51□□□□□ -1.21
CTF1-201ENST00000279804 KRTAP4-6Q9BYQ5 205 aa7.37□□□□□ -1.23
CTF1-201ENST00000279804 HMCN1Q96RW7 5635 aa7.34□□□□□ -1.23
CTF1-201ENST00000279804 MT1AP04731 61 aa7.19□□□□□ -1.26
CTF1-201ENST00000279804 SYNE1Q8NF91 8797 aaKnown RBP7.18□□□□□ -1.26
CTF1-201ENST00000279804 KRTAP12-4P60329 112 aa7.18□□□□□ -1.26
CTF1-201ENST00000279804 KRTAP6-1Q3LI64 71 aa7.16□□□□□ -1.26
CTF1-201ENST00000279804 KRTAP20-2Q3LI61 65 aa7.13□□□□□ -1.27
CTF1-201ENST00000279804 KRTAP5-3Q6L8H2 238 aa6.9□□□□□ -1.31
CTF1-201ENST00000279804 KRTAP9-4Q9BYQ2 154 aa6.89□□□□□ -1.31
CTF1-201ENST00000279804 AHNAK2Q8IVF2 5795 aa6.85□□□□□ -1.31
CTF1-201ENST00000279804 A0A0A0MQY5 61 aa6.84□□□□□ -1.32
CTF1-201ENST00000279804 GPR98Q8WXG9 6306 aa6.73□□□□□ -1.33
CTF1-201ENST00000279804 KRTAP6-2Q3LI66 62 aa6.73□□□□□ -1.33
CTF1-201ENST00000279804 KRTAP5-2Q701N4 177 aa6.73□□□□□ -1.33
CTF1-201ENST00000279804 KRTAP5-10Q6L8G5 202 aa6.68□□□□□ -1.34
CTF1-201ENST00000279804 MT3P25713 68 aa6.53□□□□□ -1.36
CTF1-201ENST00000279804 INE1O15225 51 aa6.4□□□□□ -1.38
CTF1-201ENST00000279804 KRTAP4-11Q9BYQ6 195 aa6.36□□□□□ -1.39
CTF1-201ENST00000279804 KRTAP5-7Q6L8G8 165 aa6.3□□□□□ -1.4
CTF1-201ENST00000279804 OBSCNQ5VST9 7968 aa6.26□□□□□ -1.41
CTF1-201ENST00000279804 KRTAP5-8O75690 187 aa6.16□□□□□ -1.42
CTF1-201ENST00000279804 KRTAP5-1Q6L8H4 278 aa5.95□□□□□ -1.46
CTF1-201ENST00000279804 LCE3DQ9BYE3 92 aa5.94□□□□□ -1.46
CTF1-201ENST00000279804 LCE1EQ5T753 118 aa5.84□□□□□ -1.47
CTF1-201ENST00000279804 LCE3EQ5T5B0 92 aa5.79□□□□□ -1.48
CTF1-201ENST00000279804 MUC5ACP98088 5654 aa5.75□□□□□ -1.49
CTF1-201ENST00000279804 KRTAP9-9Q9BYP9 154 aa5.7□□□□□ -1.5
CTF1-201ENST00000279804 MUC5BQ9HC84 5762 aaPredicted RBP5.55□□□□□ -1.52
CTF1-201ENST00000279804 LCE1BQ5T7P3 118 aa5.53□□□□□ -1.52
CTF1-201ENST00000279804 KRTAP4-2Q9BYR5 136 aa5.53□□□□□ -1.52
CTF1-201ENST00000279804 LCE1CQ5T751 118 aa5.44□□□□□ -1.54
CTF1-201ENST00000279804 AHNAKQ09666 5890 aaKnown RBP5.41□□□□□ -1.54
CTF1-201ENST00000279804 PRM1P04553 51 aa5.05□□□□□ -1.6
CTF1-201ENST00000279804 KRTAP5-6Q6L8G9 129 aaPredicted RBP5□□□□□ -1.61
CTF1-201ENST00000279804 KRTAP5-11Q6L8G4 156 aa4.88□□□□□ -1.63
CTF1-201ENST00000279804 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
CTF1-201ENST00000279804 KRTAP21-2Q3LI59 83 aa4.7□□□□□ -1.66
CTF1-201ENST00000279804 LCE1FQ5T754 118 aa4.57□□□□□ -1.68
CTF1-201ENST00000279804 KRTAP4-4Q9BYR3 166 aa4.28□□□□□ -1.72
CTF1-201ENST00000279804 PHGR1C9JFL3 82 aa4.21□□□□□ -1.74
CTF1-201ENST00000279804 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
CTF1-201ENST00000279804 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
CTF1-201ENST00000279804 MUC16Q8WXI7 14507 aa2.7□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 247.3 ms