RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 LOC100996750A0A140TA64 210 aa7.75□□□□□ -1.17
CCDC7-201ENST00000277657 KRTAP4-6Q9BYQ5 205 aa7.75□□□□□ -1.17
CCDC7-201ENST00000277657 LUZP6Q538Z0 58 aa7.75□□□□□ -1.17
CCDC7-201ENST00000277657 NDUFAF8A1L188 74 aa7.71□□□□□ -1.18
CCDC7-201ENST00000277657 MUC12Q9UKN1 5478 aa7.71□□□□□ -1.18
CCDC7-201ENST00000277657 SPRR2FQ96RM1 72 aa7.68□□□□□ -1.18
CCDC7-201ENST00000277657 NEBP20929 6669 aa7.68□□□□□ -1.18
CCDC7-201ENST00000277657 KRTAP19-3Q7Z4W3 81 aa7.63□□□□□ -1.19
CCDC7-201ENST00000277657 KRTAP4-7Q9BYR0 210 aa7.62□□□□□ -1.19
CCDC7-201ENST00000277657 KRTAP5-9P26371 169 aa7.59□□□□□ -1.19
CCDC7-201ENST00000277657 MT1GP13640 62 aa7.57□□□□□ -1.2
CCDC7-201ENST00000277657 LCE5AQ5TCM9 118 aa7.49□□□□□ -1.21
CCDC7-201ENST00000277657 MT1MQ8N339 61 aa7.49□□□□□ -1.21
CCDC7-201ENST00000277657 KRTAP20-1Q3LI63 56 aa7.47□□□□□ -1.21
CCDC7-201ENST00000277657 KRTAP9-6A8MVA2 160 aa7.45□□□□□ -1.22
CCDC7-201ENST00000277657 MDN1Q9NU22 5596 aa7.39□□□□□ -1.23
CCDC7-201ENST00000277657 KRTAP4-3Q9BYR4 195 aa7.37□□□□□ -1.23
CCDC7-201ENST00000277657 LCE1AQ5T7P2 110 aa7.36□□□□□ -1.23
CCDC7-201ENST00000277657 SPRR2EP22531 72 aa7.25□□□□□ -1.25
CCDC7-201ENST00000277657 SPRR2BP35325 72 aa7.25□□□□□ -1.25
CCDC7-201ENST00000277657 SPRR2AP35326 72 aa7.25□□□□□ -1.25
CCDC7-201ENST00000277657 KRTAP2-3P0C7H8 128 aa7.24□□□□□ -1.25
CCDC7-201ENST00000277657 KRTAP2-4Q9BYR9 128 aa7.24□□□□□ -1.25
CCDC7-201ENST00000277657 DSTQ03001 7570 aaKnown RBP7.07□□□□□ -1.28
CCDC7-201ENST00000277657 KRTAP2-2Q9BYT5 123 aa6.99□□□□□ -1.29
CCDC7-201ENST00000277657 KRTAP2-1Q9BYU5 128 aa6.99□□□□□ -1.29
CCDC7-201ENST00000277657 H3BS24 57 aa6.98□□□□□ -1.29
CCDC7-201ENST00000277657 SPRR2DP22532 72 aa6.97□□□□□ -1.29
CCDC7-201ENST00000277657 KRTAP5-5Q701N2 237 aaPredicted RBP6.77□□□□□ -1.33
CCDC7-201ENST00000277657 A0A0A0MQY5 61 aa6.77□□□□□ -1.33
CCDC7-201ENST00000277657 LCE3BQ5TA77 95 aa6.77□□□□□ -1.33
CCDC7-201ENST00000277657 MT1AP04731 61 aa6.65□□□□□ -1.34
CCDC7-201ENST00000277657 KRTAP6-1Q3LI64 71 aa6.6□□□□□ -1.35
CCDC7-201ENST00000277657 SYNE1Q8NF91 8797 aaKnown RBP6.41□□□□□ -1.38
CCDC7-201ENST00000277657 KRTAP5-4Q6L8H1 288 aa6.39□□□□□ -1.39
CCDC7-201ENST00000277657 GPR98Q8WXG9 6306 aa6.35□□□□□ -1.39
CCDC7-201ENST00000277657 INE1O15225 51 aa6.35□□□□□ -1.39
CCDC7-201ENST00000277657 KRTAP9-4Q9BYQ2 154 aa6.31□□□□□ -1.4
CCDC7-201ENST00000277657 KRTAP9-9Q9BYP9 154 aa6.3□□□□□ -1.4
CCDC7-201ENST00000277657 KRTAP4-9Q9BYQ8 210 aa6.3□□□□□ -1.4
CCDC7-201ENST00000277657 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
CCDC7-201ENST00000277657 LCE4AQ5TA78 99 aa6.19□□□□□ -1.42
CCDC7-201ENST00000277657 LCE1DQ5T752 114 aa6.17□□□□□ -1.42
CCDC7-201ENST00000277657 KRTAP4-12Q9BQ66 201 aa6.11□□□□□ -1.43
CCDC7-201ENST00000277657 MT4P47944 62 aa6.05□□□□□ -1.44
CCDC7-201ENST00000277657 KRTAP6-2Q3LI66 62 aa6.05□□□□□ -1.44
CCDC7-201ENST00000277657 HMCN1Q96RW7 5635 aa6.03□□□□□ -1.44
CCDC7-201ENST00000277657 MT3P25713 68 aa6.01□□□□□ -1.45
CCDC7-201ENST00000277657 KRTAP5-3Q6L8H2 238 aa5.98□□□□□ -1.45
CCDC7-201ENST00000277657 KRTAP4-2Q9BYR5 136 aa5.98□□□□□ -1.45
CCDC7-201ENST00000277657 KRTAP20-2Q3LI61 65 aa5.95□□□□□ -1.46
CCDC7-201ENST00000277657 LCE3DQ9BYE3 92 aa5.9□□□□□ -1.47
CCDC7-201ENST00000277657 AHNAK2Q8IVF2 5795 aa5.89□□□□□ -1.47
CCDC7-201ENST00000277657 KRTAP5-10Q6L8G5 202 aa5.85□□□□□ -1.47
CCDC7-201ENST00000277657 KRTAP5-2Q701N4 177 aa5.83□□□□□ -1.48
CCDC7-201ENST00000277657 LCE3EQ5T5B0 92 aa5.74□□□□□ -1.49
CCDC7-201ENST00000277657 KRTAP5-7Q6L8G8 165 aa5.68□□□□□ -1.5
CCDC7-201ENST00000277657 KRTAP4-11Q9BYQ6 195 aa5.55□□□□□ -1.52
CCDC7-201ENST00000277657 OBSCNQ5VST9 7968 aa5.51□□□□□ -1.53
CCDC7-201ENST00000277657 LCE1EQ5T753 118 aa5.2□□□□□ -1.58
CCDC7-201ENST00000277657 PRM1P04553 51 aa5.08□□□□□ -1.6
CCDC7-201ENST00000277657 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
CCDC7-201ENST00000277657 KRTAP5-1Q6L8H4 278 aa5.02□□□□□ -1.61
CCDC7-201ENST00000277657 MUC5ACP98088 5654 aa4.92□□□□□ -1.62
CCDC7-201ENST00000277657 AHNAKQ09666 5890 aaKnown RBP4.9□□□□□ -1.63
CCDC7-201ENST00000277657 MUC5BQ9HC84 5762 aaPredicted RBP4.86□□□□□ -1.63
CCDC7-201ENST00000277657 LCE1CQ5T751 118 aa4.86□□□□□ -1.63
CCDC7-201ENST00000277657 LCE1BQ5T7P3 118 aa4.86□□□□□ -1.63
CCDC7-201ENST00000277657 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.56□□□□□ -1.68
CCDC7-201ENST00000277657 KRTAP21-2Q3LI59 83 aa4.34□□□□□ -1.71
CCDC7-201ENST00000277657 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
CCDC7-201ENST00000277657 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
CCDC7-201ENST00000277657 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
CCDC7-201ENST00000277657 PHGR1C9JFL3 82 aa3.67□□□□□ -1.82
CCDC7-201ENST00000277657 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
CCDC7-201ENST00000277657 KRTAP21-1Q3LI58 79 aa3.15□□□□□ -1.91
CCDC7-201ENST00000277657 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms