RNA–Protein interactions for RNA: ENST00000275820.3

NOM1-201, Transcript of nucleolar protein with MIF4G domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOM1, Length 6,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOM1-201ENST00000275820 KRTAP19-7Q3SYF9 63 aa5.69□□□□□ -1.5
NOM1-201ENST00000275820 MT3P25713 68 aa5.68□□□□□ -1.5
NOM1-201ENST00000275820 LCE2DQ5TA82 110 aaPredicted RBP5.68□□□□□ -1.5
NOM1-201ENST00000275820 PRM1P04553 51 aa5.66□□□□□ -1.5
NOM1-201ENST00000275820 FAT4Q6V0I7 4981 aa5.65□□□□□ -1.5
NOM1-201ENST00000275820 HMCN2Q8NDA2 5059 aa5.64□□□□□ -1.51
NOM1-201ENST00000275820 RNF213Q63HN8 5207 aa5.61□□□□□ -1.51
NOM1-201ENST00000275820 UBR4Q5T4S7 5183 aa5.59□□□□□ -1.51
NOM1-201ENST00000275820 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
NOM1-201ENST00000275820 MT4P47944 62 aa5.54□□□□□ -1.52
NOM1-201ENST00000275820 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
NOM1-201ENST00000275820 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
NOM1-201ENST00000275820 KRTAP2-1Q9BYU5 128 aa5.52□□□□□ -1.53
NOM1-201ENST00000275820 MT1AP04731 61 aa5.47□□□□□ -1.53
NOM1-201ENST00000275820 KRTAP9-2Q9BYQ4 174 aa5.46□□□□□ -1.54
NOM1-201ENST00000275820 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
NOM1-201ENST00000275820 KRTAP4-9Q9BYQ8 210 aa5.42□□□□□ -1.54
NOM1-201ENST00000275820 FSIP2Q5CZC0 6907 aa5.41□□□□□ -1.54
NOM1-201ENST00000275820 LCE1BQ5T7P3 118 aa5.35□□□□□ -1.55
NOM1-201ENST00000275820 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
NOM1-201ENST00000275820 KRTAP9-6A8MVA2 160 aa5.32□□□□□ -1.56
NOM1-201ENST00000275820 MUC2Q02817 5179 aa5.27□□□□□ -1.57
NOM1-201ENST00000275820 KRTAP6-1Q3LI64 71 aa5.18□□□□□ -1.58
NOM1-201ENST00000275820 SYNE2Q8WXH0 6885 aaKnown RBP5.15□□□□□ -1.59
NOM1-201ENST00000275820 LCE5AQ5TCM9 118 aa5.11□□□□□ -1.59
NOM1-201ENST00000275820 LCE1AQ5T7P2 110 aa5.07□□□□□ -1.6
NOM1-201ENST00000275820 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
NOM1-201ENST00000275820 KRTAP9-6A0A140TA67 174 aa5.04□□□□□ -1.6
NOM1-201ENST00000275820 KRTAP9-4Q9BYQ2 154 aa5.04□□□□□ -1.6
NOM1-201ENST00000275820 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
NOM1-201ENST00000275820 KRTAP6-3Q3LI67 103 aa4.93□□□□□ -1.62
NOM1-201ENST00000275820 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
NOM1-201ENST00000275820 KRTAP20-1Q3LI63 56 aa4.85□□□□□ -1.63
NOM1-201ENST00000275820 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
NOM1-201ENST00000275820 USH2AO75445 5202 aa4.79□□□□□ -1.64
NOM1-201ENST00000275820 FCGBPQ9Y6R7 5405 aaPredicted RBP4.77□□□□□ -1.65
NOM1-201ENST00000275820 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.75□□□□□ -1.65
NOM1-201ENST00000275820 KMT2DO14686 5537 aa4.65□□□□□ -1.67
NOM1-201ENST00000275820 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
NOM1-201ENST00000275820 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
NOM1-201ENST00000275820 LCE1CQ5T751 118 aa4.44□□□□□ -1.7
NOM1-201ENST00000275820 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
NOM1-201ENST00000275820 LCE1FQ5T754 118 aa4.44□□□□□ -1.7
NOM1-201ENST00000275820 SSPOA2VEC9 5147 aa4.39□□□□□ -1.71
NOM1-201ENST00000275820 KRTAP5-9P26371 169 aa4.33□□□□□ -1.72
NOM1-201ENST00000275820 MACF1Q9UPN3 7388 aaKnown RBP4.33□□□□□ -1.72
NOM1-201ENST00000275820 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
NOM1-201ENST00000275820 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
NOM1-201ENST00000275820 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
NOM1-201ENST00000275820 KRTAP20-2Q3LI61 65 aa4.12□□□□□ -1.75
NOM1-201ENST00000275820 NEBP20929 6669 aa4.12□□□□□ -1.75
NOM1-201ENST00000275820 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
NOM1-201ENST00000275820 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
NOM1-201ENST00000275820 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
NOM1-201ENST00000275820 MUC19Q7Z5P9 8384 aa3.91□□□□□ -1.78
NOM1-201ENST00000275820 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
NOM1-201ENST00000275820 KRTAP5-4Q6L8H1 288 aa3.79□□□□□ -1.8
NOM1-201ENST00000275820 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
NOM1-201ENST00000275820 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
NOM1-201ENST00000275820 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
NOM1-201ENST00000275820 MUC5ACP98088 5654 aa3.4□□□□□ -1.87
NOM1-201ENST00000275820 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
NOM1-201ENST00000275820 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
NOM1-201ENST00000275820 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.9
NOM1-201ENST00000275820 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
NOM1-201ENST00000275820 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
NOM1-201ENST00000275820 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
NOM1-201ENST00000275820 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
NOM1-201ENST00000275820 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
NOM1-201ENST00000275820 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
NOM1-201ENST00000275820 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
NOM1-201ENST00000275820 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
NOM1-201ENST00000275820 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
NOM1-201ENST00000275820 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
NOM1-201ENST00000275820 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
NOM1-201ENST00000275820 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
NOM1-201ENST00000275820 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 10.9 ms