RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 LCE2CQ5TA81 110 aa1.56□□□□□ -2.16
HMCN1-201ENST00000271588 LCE3BQ5TA77 95 aa1.56□□□□□ -2.16
HMCN1-201ENST00000271588 SPRR2DP22532 72 aa1.56□□□□□ -2.16
HMCN1-201ENST00000271588 MT1MQ8N339 61 aa1.55□□□□□ -2.16
HMCN1-201ENST00000271588 PRM1P04553 51 aa1.53□□□□□ -2.16
HMCN1-201ENST00000271588 KIAA1109Q2LD37 5005 aa1.52□□□□□ -2.17
HMCN1-201ENST00000271588 KRTAP19-6Q3LI70 58 aa1.51□□□□□ -2.17
HMCN1-201ENST00000271588 USH2AO75445 5202 aa1.5□□□□□ -2.17
HMCN1-201ENST00000271588 FSIP2Q5CZC0 6907 aa1.5□□□□□ -2.17
HMCN1-201ENST00000271588 MUC2Q02817 5179 aa1.5□□□□□ -2.17
HMCN1-201ENST00000271588 LCE1AQ5T7P2 110 aa1.5□□□□□ -2.17
HMCN1-201ENST00000271588 KRTAP19-2Q3LHN2 52 aa1.49□□□□□ -2.17
HMCN1-201ENST00000271588 AHNAK2Q8IVF2 5795 aa1.48□□□□□ -2.17
HMCN1-201ENST00000271588 FCGBPQ9Y6R7 5405 aaPredicted RBP1.45□□□□□ -2.18
HMCN1-201ENST00000271588 LCE2DQ5TA82 110 aaPredicted RBP1.44□□□□□ -2.18
HMCN1-201ENST00000271588 KRTAP4-8A0A0G2JLE6 195 aa1.42□□□□□ -2.18
HMCN1-201ENST00000271588 KRTAP4-8Q9BYQ9 185 aa1.42□□□□□ -2.18
HMCN1-201ENST00000271588 LCE2AQ5TA79 106 aaPredicted RBP1.42□□□□□ -2.18
HMCN1-201ENST00000271588 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
HMCN1-201ENST00000271588 KRTAP19-7Q3SYF9 63 aa1.41□□□□□ -2.18
HMCN1-201ENST00000271588 LCE1EQ5T753 118 aa1.38□□□□□ -2.19
HMCN1-201ENST00000271588 KRTAP4-7Q9BYR0 210 aa1.38□□□□□ -2.19
HMCN1-201ENST00000271588 FAT4Q6V0I7 4981 aa1.37□□□□□ -2.19
HMCN1-201ENST00000271588 LCE4AQ5TA78 99 aa1.36□□□□□ -2.19
HMCN1-201ENST00000271588 KRTAP4-9Q9BYQ8 210 aa1.35□□□□□ -2.19
HMCN1-201ENST00000271588 NEBP20929 6669 aa1.35□□□□□ -2.19
HMCN1-201ENST00000271588 SYNE1Q8NF91 8797 aaKnown RBP1.34□□□□□ -2.19
HMCN1-201ENST00000271588 KRTAP17-1Q9BYP8 105 aa1.33□□□□□ -2.2
HMCN1-201ENST00000271588 KRTAP2-2Q9BYT5 123 aa1.33□□□□□ -2.2
HMCN1-201ENST00000271588 KRTAP9-7A8MTY7 169 aa1.33□□□□□ -2.2
HMCN1-201ENST00000271588 LCE5AQ5TCM9 118 aa1.33□□□□□ -2.2
HMCN1-201ENST00000271588 LOC100996750A0A140TA64 210 aa1.32□□□□□ -2.2
HMCN1-201ENST00000271588 KRTAP9-4Q9BYQ2 154 aa1.32□□□□□ -2.2
HMCN1-201ENST00000271588 KRTAP6-3Q3LI67 103 aa1.31□□□□□ -2.2
HMCN1-201ENST00000271588 LCE1FQ5T754 118 aa1.3□□□□□ -2.2
HMCN1-201ENST00000271588 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
HMCN1-201ENST00000271588 LCE1DQ5T752 114 aa1.29□□□□□ -2.2
HMCN1-201ENST00000271588 MACF1Q9UPN3 7388 aaKnown RBP1.29□□□□□ -2.2
HMCN1-201ENST00000271588 KRTAP6-2Q3LI66 62 aa1.28□□□□□ -2.2
HMCN1-201ENST00000271588 MUC5ACP98088 5654 aa1.27□□□□□ -2.21
HMCN1-201ENST00000271588 KRTAP9-6A0A140TA67 174 aa1.27□□□□□ -2.21
HMCN1-201ENST00000271588 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
HMCN1-201ENST00000271588 LCE1BQ5T7P3 118 aa1.26□□□□□ -2.21
HMCN1-201ENST00000271588 MT4P47944 62 aa1.23□□□□□ -2.21
HMCN1-201ENST00000271588 KRTAP6-1Q3LI64 71 aa1.23□□□□□ -2.21
HMCN1-201ENST00000271588 KRTAP4-3Q9BYR4 195 aa1.23□□□□□ -2.21
HMCN1-201ENST00000271588 KRTAP9-6A8MVA2 160 aa1.23□□□□□ -2.21
HMCN1-201ENST00000271588 KRTAP9-2Q9BYQ4 174 aa1.22□□□□□ -2.21
HMCN1-201ENST00000271588 KRTAP20-1Q3LI63 56 aa1.21□□□□□ -2.22
HMCN1-201ENST00000271588 SSPOA2VEC9 5147 aa1.2□□□□□ -2.22
HMCN1-201ENST00000271588 DSTQ03001 7570 aaKnown RBP1.18□□□□□ -2.22
HMCN1-201ENST00000271588 KRTAP5-9P26371 169 aa1.16□□□□□ -2.22
HMCN1-201ENST00000271588 OBSCNQ5VST9 7968 aa1.14□□□□□ -2.23
HMCN1-201ENST00000271588 KRTAP4-11Q9BYQ6 195 aa1.1□□□□□ -2.23
HMCN1-201ENST00000271588 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.1□□□□□ -2.23
HMCN1-201ENST00000271588 KRTAP5-5Q701N2 237 aaPredicted RBP1.09□□□□□ -2.23
HMCN1-201ENST00000271588 KRTAP9-9Q9BYP9 154 aa1.09□□□□□ -2.24
HMCN1-201ENST00000271588 LCE1CQ5T751 118 aa1.07□□□□□ -2.24
HMCN1-201ENST00000271588 KRTAP5-4Q6L8H1 288 aa1.04□□□□□ -2.24
HMCN1-201ENST00000271588 KRTAP20-2Q3LI61 65 aa1.02□□□□□ -2.25
HMCN1-201ENST00000271588 MUC19Q7Z5P9 8384 aa0.94□□□□□ -2.26
HMCN1-201ENST00000271588 KRTAP4-4Q9BYR3 166 aa0.93□□□□□ -2.26
HMCN1-201ENST00000271588 KRTAP5-3Q6L8H2 238 aa0.91□□□□□ -2.26
HMCN1-201ENST00000271588 KRTAP4-6Q9BYQ5 205 aa0.89□□□□□ -2.27
HMCN1-201ENST00000271588 KRTAP5-2Q701N4 177 aa0.85□□□□□ -2.27
HMCN1-201ENST00000271588 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
HMCN1-201ENST00000271588 KRTAP4-12Q9BQ66 201 aa0.84□□□□□ -2.28
HMCN1-201ENST00000271588 KRTAP4-2Q9BYR5 136 aa0.84□□□□□ -2.28
HMCN1-201ENST00000271588 KRTAP5-11Q6L8G4 156 aa0.82□□□□□ -2.28
HMCN1-201ENST00000271588 KRTAP5-8O75690 187 aa0.81□□□□□ -2.28
HMCN1-201ENST00000271588 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.81□□□□□ -2.28
HMCN1-201ENST00000271588 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
HMCN1-201ENST00000271588 KRTAP5-1Q6L8H4 278 aa0.73□□□□□ -2.29
HMCN1-201ENST00000271588 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
HMCN1-201ENST00000271588 KRTAP21-2Q3LI59 83 aa0.67□□□□□ -2.3
HMCN1-201ENST00000271588 KRTAP5-7Q6L8G8 165 aa0.67□□□□□ -2.3
HMCN1-201ENST00000271588 PHGR1C9JFL3 82 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 84 ms