RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 LCE1AQ5T7P2 110 aa9.45□□□□□ -0.9
SSBP4-201ENST00000270061 KRTAP2-3P0C7H8 128 aa9.41□□□□□ -0.9
SSBP4-201ENST00000270061 KRTAP2-4Q9BYR9 128 aa9.41□□□□□ -0.9
SSBP4-201ENST00000270061 SPRR2DP22532 72 aa9.26□□□□□ -0.93
SSBP4-201ENST00000270061 KRTAP15-1Q3LI76 137 aa9.19□□□□□ -0.94
SSBP4-201ENST00000270061 KRTAP12-3P60328 96 aa9.19□□□□□ -0.94
SSBP4-201ENST00000270061 KRTAP2-2Q9BYT5 123 aa9.12□□□□□ -0.95
SSBP4-201ENST00000270061 KRTAP2-1Q9BYU5 128 aa9.12□□□□□ -0.95
SSBP4-201ENST00000270061 KRTAP19-5Q3LI72 72 aa9.09□□□□□ -0.95
SSBP4-201ENST00000270061 KRTAP19-7Q3SYF9 63 aa9.01□□□□□ -0.97
SSBP4-201ENST00000270061 LCE3BQ5TA77 95 aa9□□□□□ -0.97
SSBP4-201ENST00000270061 MT1EP04732 61 aa8.94□□□□□ -0.98
SSBP4-201ENST00000270061 LCE5AQ5TCM9 118 aa8.86□□□□□ -0.99
SSBP4-201ENST00000270061 KRTAP19-3Q7Z4W3 81 aa8.86□□□□□ -0.99
SSBP4-201ENST00000270061 DSTQ03001 7570 aaKnown RBP8.75□□□□□ -1.01
SSBP4-201ENST00000270061 SPRR5A0A1B0GTR4 108 aa8.75□□□□□ -1.01
SSBP4-201ENST00000270061 NDUFAF8A1L188 74 aa8.72□□□□□ -1.01
SSBP4-201ENST00000270061 KRTAP19-4Q3LI73 84 aa8.69□□□□□ -1.02
SSBP4-201ENST00000270061 MT1GP13640 62 aa8.66□□□□□ -1.02
SSBP4-201ENST00000270061 MT1LQ93083 61 aa8.65□□□□□ -1.02
SSBP4-201ENST00000270061 LCE3CQ5T5A8 94 aa8.6□□□□□ -1.03
SSBP4-201ENST00000270061 LUZP6Q538Z0 58 aa8.58□□□□□ -1.04
SSBP4-201ENST00000270061 H3BS24 57 aa8.55□□□□□ -1.04
SSBP4-201ENST00000270061 MT1MQ8N339 61 aa8.5□□□□□ -1.05
SSBP4-201ENST00000270061 KRTAP4-9Q9BYQ8 210 aa8.34□□□□□ -1.07
SSBP4-201ENST00000270061 KRTAP4-7Q9BYR0 210 aa8.34□□□□□ -1.07
SSBP4-201ENST00000270061 KRTAP4-3Q9BYR4 195 aa8.29□□□□□ -1.08
SSBP4-201ENST00000270061 LCE4AQ5TA78 99 aa8.18□□□□□ -1.1
SSBP4-201ENST00000270061 LCE1DQ5T752 114 aa8.16□□□□□ -1.1
SSBP4-201ENST00000270061 KRTAP9-6A8MVA2 160 aa8.12□□□□□ -1.11
SSBP4-201ENST00000270061 MT4P47944 62 aa8.1□□□□□ -1.11
SSBP4-201ENST00000270061 HMCN1Q96RW7 5635 aa8.07□□□□□ -1.12
SSBP4-201ENST00000270061 KRTAP5-4Q6L8H1 288 aa8.05□□□□□ -1.12
SSBP4-201ENST00000270061 GPR98Q8WXG9 6306 aa7.98□□□□□ -1.13
SSBP4-201ENST00000270061 KRTAP4-6Q9BYQ5 205 aa7.87□□□□□ -1.15
SSBP4-201ENST00000270061 LOC100996750A0A140TA64 210 aa7.83□□□□□ -1.16
SSBP4-201ENST00000270061 A0A0A0MQY5 61 aa7.82□□□□□ -1.16
SSBP4-201ENST00000270061 KRTAP5-5Q701N2 237 aaPredicted RBP7.79□□□□□ -1.16
SSBP4-201ENST00000270061 AHNAK2Q8IVF2 5795 aa7.72□□□□□ -1.17
SSBP4-201ENST00000270061 KRTAP12-4P60329 112 aa7.59□□□□□ -1.19
SSBP4-201ENST00000270061 KRTAP20-2Q3LI61 65 aa7.59□□□□□ -1.19
SSBP4-201ENST00000270061 KRTAP5-10Q6L8G5 202 aa7.52□□□□□ -1.21
SSBP4-201ENST00000270061 SYNE1Q8NF91 8797 aaKnown RBP7.49□□□□□ -1.21
SSBP4-201ENST00000270061 KRTAP5-3Q6L8H2 238 aa7.38□□□□□ -1.23
SSBP4-201ENST00000270061 MT1AP04731 61 aa7.36□□□□□ -1.23
SSBP4-201ENST00000270061 KRTAP6-1Q3LI64 71 aa7.27□□□□□ -1.25
SSBP4-201ENST00000270061 INE1O15225 51 aa7.21□□□□□ -1.25
SSBP4-201ENST00000270061 KRTAP5-7Q6L8G8 165 aa7.21□□□□□ -1.25
SSBP4-201ENST00000270061 KRTAP5-2Q701N4 177 aa7.06□□□□□ -1.28
SSBP4-201ENST00000270061 KRTAP9-4Q9BYQ2 154 aa7.03□□□□□ -1.28
SSBP4-201ENST00000270061 KRTAP4-11Q9BYQ6 195 aa6.92□□□□□ -1.3
SSBP4-201ENST00000270061 KRTAP6-2Q3LI66 62 aa6.9□□□□□ -1.31
SSBP4-201ENST00000270061 OBSCNQ5VST9 7968 aa6.7□□□□□ -1.34
SSBP4-201ENST00000270061 MT3P25713 68 aa6.67□□□□□ -1.34
SSBP4-201ENST00000270061 KRTAP5-8O75690 187 aa6.67□□□□□ -1.34
SSBP4-201ENST00000270061 LCE3DQ9BYE3 92 aa6.47□□□□□ -1.37
SSBP4-201ENST00000270061 MUC5BQ9HC84 5762 aaPredicted RBP6.36□□□□□ -1.39
SSBP4-201ENST00000270061 KRTAP9-9Q9BYP9 154 aa6.33□□□□□ -1.4
SSBP4-201ENST00000270061 KRTAP5-1Q6L8H4 278 aa6.32□□□□□ -1.4
SSBP4-201ENST00000270061 LCE3EQ5T5B0 92 aa6.31□□□□□ -1.4
SSBP4-201ENST00000270061 MUC5ACP98088 5654 aa6.29□□□□□ -1.4
SSBP4-201ENST00000270061 AHNAKQ09666 5890 aaKnown RBP6.28□□□□□ -1.4
SSBP4-201ENST00000270061 LCE1EQ5T753 118 aa6.1□□□□□ -1.43
SSBP4-201ENST00000270061 LCE1BQ5T7P3 118 aa5.74□□□□□ -1.49
SSBP4-201ENST00000270061 KRTAP4-2Q9BYR5 136 aa5.74□□□□□ -1.49
SSBP4-201ENST00000270061 LCE1CQ5T751 118 aa5.66□□□□□ -1.5
SSBP4-201ENST00000270061 PRM1P04553 51 aa5.51□□□□□ -1.53
SSBP4-201ENST00000270061 KRTAP4-12Q9BQ66 201 aa5.17□□□□□ -1.58
SSBP4-201ENST00000270061 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.16□□□□□ -1.58
SSBP4-201ENST00000270061 KRTAP5-11Q6L8G4 156 aa5.11□□□□□ -1.59
SSBP4-201ENST00000270061 LCE1FQ5T754 118 aa4.96□□□□□ -1.62
SSBP4-201ENST00000270061 KRTAP21-2Q3LI59 83 aa4.78□□□□□ -1.64
SSBP4-201ENST00000270061 PHGR1C9JFL3 82 aa4.41□□□□□ -1.7
SSBP4-201ENST00000270061 KRTAP4-4Q9BYR3 166 aa4.35□□□□□ -1.71
SSBP4-201ENST00000270061 MUC19Q7Z5P9 8384 aa4.12□□□□□ -1.75
SSBP4-201ENST00000270061 KRTAP21-1Q3LI58 79 aa3.42□□□□□ -1.86
SSBP4-201ENST00000270061 MUC16Q8WXI7 14507 aa2.89□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 107.4 ms