RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 LOC100996750A0A140TA64 210 aa3.9□□□□□ -1.78
ERBB2-201ENST00000269571 FCGBPQ9Y6R7 5405 aaPredicted RBP3.88□□□□□ -1.79
ERBB2-201ENST00000269571 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
ERBB2-201ENST00000269571 MT1EP04732 61 aa3.86□□□□□ -1.79
ERBB2-201ENST00000269571 KRTAP19-6Q3LI70 58 aa3.86□□□□□ -1.79
ERBB2-201ENST00000269571 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
ERBB2-201ENST00000269571 USH2AO75445 5202 aa3.85□□□□□ -1.79
ERBB2-201ENST00000269571 KRTAP9-2Q9BYQ4 174 aa3.85□□□□□ -1.79
ERBB2-201ENST00000269571 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
ERBB2-201ENST00000269571 KRTAP2-3P0C7H8 128 aa3.85□□□□□ -1.79
ERBB2-201ENST00000269571 KRTAP2-4Q9BYR9 128 aa3.85□□□□□ -1.79
ERBB2-201ENST00000269571 KRTAP2-1Q9BYU5 128 aa3.85□□□□□ -1.79
ERBB2-201ENST00000269571 SPRR2DP22532 72 aa3.83□□□□□ -1.8
ERBB2-201ENST00000269571 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
ERBB2-201ENST00000269571 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
ERBB2-201ENST00000269571 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
ERBB2-201ENST00000269571 PRM1P04553 51 aa3.78□□□□□ -1.8
ERBB2-201ENST00000269571 KRTAP19-7Q3SYF9 63 aa3.78□□□□□ -1.8
ERBB2-201ENST00000269571 KMT2DO14686 5537 aa3.75□□□□□ -1.81
ERBB2-201ENST00000269571 KRTAP4-9Q9BYQ8 210 aa3.72□□□□□ -1.81
ERBB2-201ENST00000269571 MT1MQ8N339 61 aa3.71□□□□□ -1.81
ERBB2-201ENST00000269571 LCE2DQ5TA82 110 aaPredicted RBP3.7□□□□□ -1.82
ERBB2-201ENST00000269571 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
ERBB2-201ENST00000269571 KRTAP9-6A0A140TA67 174 aa3.54□□□□□ -1.84
ERBB2-201ENST00000269571 MT3P25713 68 aa3.5□□□□□ -1.85
ERBB2-201ENST00000269571 MT4P47944 62 aa3.5□□□□□ -1.85
ERBB2-201ENST00000269571 MUC12Q9UKN1 5478 aa3.49□□□□□ -1.85
ERBB2-201ENST00000269571 MACF1Q9UPN3 7388 aaKnown RBP3.49□□□□□ -1.85
ERBB2-201ENST00000269571 SSPOA2VEC9 5147 aa3.48□□□□□ -1.85
ERBB2-201ENST00000269571 KRTAP9-7A8MTY7 169 aa3.4□□□□□ -1.86
ERBB2-201ENST00000269571 MT1AP04731 61 aa3.4□□□□□ -1.87
ERBB2-201ENST00000269571 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
ERBB2-201ENST00000269571 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
ERBB2-201ENST00000269571 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
ERBB2-201ENST00000269571 LCE1DQ5T752 114 aa3.37□□□□□ -1.87
ERBB2-201ENST00000269571 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.36□□□□□ -1.87
ERBB2-201ENST00000269571 LCE1AQ5T7P2 110 aa3.36□□□□□ -1.87
ERBB2-201ENST00000269571 KRTAP6-3Q3LI67 103 aa3.31□□□□□ -1.88
ERBB2-201ENST00000269571 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
ERBB2-201ENST00000269571 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
ERBB2-201ENST00000269571 MDN1Q9NU22 5596 aa3.18□□□□□ -1.9
ERBB2-201ENST00000269571 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
ERBB2-201ENST00000269571 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
ERBB2-201ENST00000269571 KRTAP9-4Q9BYQ2 154 aa3.11□□□□□ -1.91
ERBB2-201ENST00000269571 LCE1EQ5T753 118 aa3.09□□□□□ -1.92
ERBB2-201ENST00000269571 KRTAP5-9P26371 169 aa3.06□□□□□ -1.92
ERBB2-201ENST00000269571 LCE4AQ5TA78 99 aa3□□□□□ -1.93
ERBB2-201ENST00000269571 NEBP20929 6669 aa3□□□□□ -1.93
ERBB2-201ENST00000269571 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
ERBB2-201ENST00000269571 KRTAP4-6Q9BYQ5 205 aa2.88□□□□□ -1.95
ERBB2-201ENST00000269571 KRTAP4-11Q9BYQ6 195 aa2.81□□□□□ -1.96
ERBB2-201ENST00000269571 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
ERBB2-201ENST00000269571 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
ERBB2-201ENST00000269571 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
ERBB2-201ENST00000269571 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
ERBB2-201ENST00000269571 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
ERBB2-201ENST00000269571 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
ERBB2-201ENST00000269571 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
ERBB2-201ENST00000269571 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
ERBB2-201ENST00000269571 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
ERBB2-201ENST00000269571 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.03
ERBB2-201ENST00000269571 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
ERBB2-201ENST00000269571 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
ERBB2-201ENST00000269571 KRTAP5-3Q6L8H2 238 aa2.3□□□□□ -2.04
ERBB2-201ENST00000269571 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
ERBB2-201ENST00000269571 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
ERBB2-201ENST00000269571 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
ERBB2-201ENST00000269571 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
ERBB2-201ENST00000269571 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
ERBB2-201ENST00000269571 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
ERBB2-201ENST00000269571 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
ERBB2-201ENST00000269571 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
ERBB2-201ENST00000269571 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
ERBB2-201ENST00000269571 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
ERBB2-201ENST00000269571 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
ERBB2-201ENST00000269571 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
ERBB2-201ENST00000269571 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms