RNA–Protein interactions for RNA: ENST00000269141.7

CDH2-201, Transcript of cadherin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH2, Length 4,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH2-201ENST00000269141 SPRR2EP22531 72 aa3.81□□□□□ -1.8
CDH2-201ENST00000269141 SPRR2BP35325 72 aa3.81□□□□□ -1.8
CDH2-201ENST00000269141 SPRR2AP35326 72 aa3.81□□□□□ -1.8
CDH2-201ENST00000269141 MT1GP13640 62 aa3.8□□□□□ -1.8
CDH2-201ENST00000269141 SYNE2Q8WXH0 6885 aaKnown RBP3.8□□□□□ -1.8
CDH2-201ENST00000269141 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
CDH2-201ENST00000269141 LCE2DQ5TA82 110 aaPredicted RBP3.78□□□□□ -1.8
CDH2-201ENST00000269141 MT1EP04732 61 aa3.77□□□□□ -1.81
CDH2-201ENST00000269141 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
CDH2-201ENST00000269141 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
CDH2-201ENST00000269141 MT1LQ93083 61 aa3.75□□□□□ -1.81
CDH2-201ENST00000269141 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
CDH2-201ENST00000269141 KRTAP19-3Q7Z4W3 81 aa3.7□□□□□ -1.82
CDH2-201ENST00000269141 KRTAP9-6A0A140TA67 174 aa3.69□□□□□ -1.82
CDH2-201ENST00000269141 LOC100996750A0A140TA64 210 aa3.66□□□□□ -1.82
CDH2-201ENST00000269141 SPRR2DP22532 72 aa3.65□□□□□ -1.83
CDH2-201ENST00000269141 KRTAP19-4Q3LI73 84 aa3.63□□□□□ -1.83
CDH2-201ENST00000269141 MT1MQ8N339 61 aa3.61□□□□□ -1.83
CDH2-201ENST00000269141 LCE3BQ5TA77 95 aa3.6□□□□□ -1.83
CDH2-201ENST00000269141 PRM1P04553 51 aa3.6□□□□□ -1.83
CDH2-201ENST00000269141 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
CDH2-201ENST00000269141 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
CDH2-201ENST00000269141 KRTAP2-1Q9BYU5 128 aa3.51□□□□□ -1.85
CDH2-201ENST00000269141 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
CDH2-201ENST00000269141 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
CDH2-201ENST00000269141 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.46□□□□□ -1.85
CDH2-201ENST00000269141 MDN1Q9NU22 5596 aa3.46□□□□□ -1.86
CDH2-201ENST00000269141 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
CDH2-201ENST00000269141 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
CDH2-201ENST00000269141 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
CDH2-201ENST00000269141 KRTAP9-7A8MTY7 169 aa3.42□□□□□ -1.86
CDH2-201ENST00000269141 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
CDH2-201ENST00000269141 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
CDH2-201ENST00000269141 MT4P47944 62 aa3.36□□□□□ -1.87
CDH2-201ENST00000269141 KRTAP6-3Q3LI67 103 aa3.32□□□□□ -1.88
CDH2-201ENST00000269141 KRTAP4-9Q9BYQ8 210 aa3.3□□□□□ -1.88
CDH2-201ENST00000269141 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
CDH2-201ENST00000269141 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
CDH2-201ENST00000269141 MT1AP04731 61 aa3.19□□□□□ -1.9
CDH2-201ENST00000269141 LCE1DQ5T752 114 aa3.19□□□□□ -1.9
CDH2-201ENST00000269141 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
CDH2-201ENST00000269141 MT3P25713 68 aa3.11□□□□□ -1.91
CDH2-201ENST00000269141 KRTAP20-1Q3LI63 56 aa3.09□□□□□ -1.91
CDH2-201ENST00000269141 NEBP20929 6669 aa3.08□□□□□ -1.92
CDH2-201ENST00000269141 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
CDH2-201ENST00000269141 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
CDH2-201ENST00000269141 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
CDH2-201ENST00000269141 KRTAP4-6Q9BYQ5 205 aa2.95□□□□□ -1.94
CDH2-201ENST00000269141 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
CDH2-201ENST00000269141 LCE4AQ5TA78 99 aa2.88□□□□□ -1.95
CDH2-201ENST00000269141 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
CDH2-201ENST00000269141 KRTAP20-2Q3LI61 65 aa2.75□□□□□ -1.97
CDH2-201ENST00000269141 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
CDH2-201ENST00000269141 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
CDH2-201ENST00000269141 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
CDH2-201ENST00000269141 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
CDH2-201ENST00000269141 KRTAP5-4Q6L8H1 288 aa2.62□□□□□ -1.99
CDH2-201ENST00000269141 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
CDH2-201ENST00000269141 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
CDH2-201ENST00000269141 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
CDH2-201ENST00000269141 KRTAP9-9Q9BYP9 154 aa2.34□□□□□ -2.04
CDH2-201ENST00000269141 KRTAP4-12Q9BQ66 201 aa2.31□□□□□ -2.04
CDH2-201ENST00000269141 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
CDH2-201ENST00000269141 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
CDH2-201ENST00000269141 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.05
CDH2-201ENST00000269141 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
CDH2-201ENST00000269141 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
CDH2-201ENST00000269141 KRTAP5-10Q6L8G5 202 aa2.18□□□□□ -2.06
CDH2-201ENST00000269141 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
CDH2-201ENST00000269141 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.08
CDH2-201ENST00000269141 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
CDH2-201ENST00000269141 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
CDH2-201ENST00000269141 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
CDH2-201ENST00000269141 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.12
CDH2-201ENST00000269141 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
CDH2-201ENST00000269141 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
CDH2-201ENST00000269141 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 81.6 ms