RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
COPS3-201ENST00000268717 KRTAP19-5Q3LI72 72 aa5.72□□□□□ -1.49
COPS3-201ENST00000268717 SPRR2EP22531 72 aa5.67□□□□□ -1.5
COPS3-201ENST00000268717 SPRR2BP35325 72 aa5.67□□□□□ -1.5
COPS3-201ENST00000268717 SPRR2AP35326 72 aa5.67□□□□□ -1.5
COPS3-201ENST00000268717 KRTAP20-1Q3LI63 56 aa5.67□□□□□ -1.5
COPS3-201ENST00000268717 KRTAP19-7Q3SYF9 63 aa5.65□□□□□ -1.51
COPS3-201ENST00000268717 LCE1AQ5T7P2 110 aa5.62□□□□□ -1.51
COPS3-201ENST00000268717 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.52
COPS3-201ENST00000268717 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
COPS3-201ENST00000268717 MT1EP04732 61 aa5.56□□□□□ -1.52
COPS3-201ENST00000268717 KRTAP2-3P0C7H8 128 aa5.56□□□□□ -1.52
COPS3-201ENST00000268717 KRTAP2-4Q9BYR9 128 aa5.56□□□□□ -1.52
COPS3-201ENST00000268717 SPRR2DP22532 72 aa5.48□□□□□ -1.53
COPS3-201ENST00000268717 MT1LQ93083 61 aa5.46□□□□□ -1.54
COPS3-201ENST00000268717 LCE3CQ5T5A8 94 aa5.44□□□□□ -1.54
COPS3-201ENST00000268717 LUZP6Q538Z0 58 aa5.41□□□□□ -1.54
COPS3-201ENST00000268717 KRTAP2-2Q9BYT5 123 aa5.39□□□□□ -1.55
COPS3-201ENST00000268717 KRTAP2-1Q9BYU5 128 aa5.39□□□□□ -1.55
COPS3-201ENST00000268717 LCE3BQ5TA77 95 aa5.33□□□□□ -1.56
COPS3-201ENST00000268717 KRTAP19-3Q7Z4W3 81 aa5.33□□□□□ -1.56
COPS3-201ENST00000268717 MT1GP13640 62 aa5.3□□□□□ -1.56
COPS3-201ENST00000268717 NDUFAF8A1L188 74 aa5.29□□□□□ -1.56
COPS3-201ENST00000268717 LCE5AQ5TCM9 118 aa5.29□□□□□ -1.56
COPS3-201ENST00000268717 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
COPS3-201ENST00000268717 MT1MQ8N339 61 aa5.22□□□□□ -1.57
COPS3-201ENST00000268717 DSTQ03001 7570 aaKnown RBP5.2□□□□□ -1.58
COPS3-201ENST00000268717 A0A0A0MQY5 61 aa5.13□□□□□ -1.59
COPS3-201ENST00000268717 KRTAP4-12Q9BQ66 201 aa5.12□□□□□ -1.59
COPS3-201ENST00000268717 KRTAP4-3Q9BYR4 195 aa5.12□□□□□ -1.59
COPS3-201ENST00000268717 KRTAP9-6A8MVA2 160 aa5.11□□□□□ -1.59
COPS3-201ENST00000268717 KRTAP9-9Q9BYP9 154 aa5.01□□□□□ -1.61
COPS3-201ENST00000268717 KRTAP9-4Q9BYQ2 154 aa5.01□□□□□ -1.61
COPS3-201ENST00000268717 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
COPS3-201ENST00000268717 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
COPS3-201ENST00000268717 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
COPS3-201ENST00000268717 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
COPS3-201ENST00000268717 HMCN1Q96RW7 5635 aa4.8□□□□□ -1.64
COPS3-201ENST00000268717 MT4P47944 62 aa4.79□□□□□ -1.64
COPS3-201ENST00000268717 KRTAP5-5Q701N2 237 aaPredicted RBP4.72□□□□□ -1.65
COPS3-201ENST00000268717 GPR98Q8WXG9 6306 aa4.71□□□□□ -1.66
COPS3-201ENST00000268717 MT1AP04731 61 aa4.65□□□□□ -1.66
COPS3-201ENST00000268717 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
COPS3-201ENST00000268717 AHNAK2Q8IVF2 5795 aa4.61□□□□□ -1.67
COPS3-201ENST00000268717 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
COPS3-201ENST00000268717 KRTAP20-2Q3LI61 65 aa4.52□□□□□ -1.69
COPS3-201ENST00000268717 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
COPS3-201ENST00000268717 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
COPS3-201ENST00000268717 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
COPS3-201ENST00000268717 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
COPS3-201ENST00000268717 INE1O15225 51 aa4.45□□□□□ -1.7
COPS3-201ENST00000268717 KRTAP5-10Q6L8G5 202 aa4.45□□□□□ -1.7
COPS3-201ENST00000268717 KRTAP5-7Q6L8G8 165 aa4.26□□□□□ -1.73
COPS3-201ENST00000268717 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
COPS3-201ENST00000268717 MT3P25713 68 aa4.21□□□□□ -1.73
COPS3-201ENST00000268717 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
COPS3-201ENST00000268717 LCE3DQ9BYE3 92 aa4.1□□□□□ -1.75
COPS3-201ENST00000268717 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
COPS3-201ENST00000268717 KRTAP5-8O75690 187 aa3.96□□□□□ -1.78
COPS3-201ENST00000268717 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
COPS3-201ENST00000268717 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
COPS3-201ENST00000268717 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
COPS3-201ENST00000268717 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
COPS3-201ENST00000268717 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
COPS3-201ENST00000268717 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
COPS3-201ENST00000268717 PRM1P04553 51 aa3.49□□□□□ -1.85
COPS3-201ENST00000268717 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
COPS3-201ENST00000268717 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
COPS3-201ENST00000268717 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
COPS3-201ENST00000268717 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
COPS3-201ENST00000268717 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
COPS3-201ENST00000268717 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
COPS3-201ENST00000268717 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
COPS3-201ENST00000268717 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
COPS3-201ENST00000268717 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
COPS3-201ENST00000268717 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
COPS3-201ENST00000268717 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 112.6 ms