RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 KRTAP2-4Q9BYR9 128 aa5.87□□□□□ -1.47
SPG7-201ENST00000268704 KRTAP2-1Q9BYU5 128 aa5.87□□□□□ -1.47
SPG7-201ENST00000268704 MT1LQ93083 61 aa5.84□□□□□ -1.47
SPG7-201ENST00000268704 DSTQ03001 7570 aaKnown RBP5.81□□□□□ -1.48
SPG7-201ENST00000268704 MT1EP04732 61 aa5.81□□□□□ -1.48
SPG7-201ENST00000268704 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
SPG7-201ENST00000268704 MUC12Q9UKN1 5478 aa5.67□□□□□ -1.5
SPG7-201ENST00000268704 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
SPG7-201ENST00000268704 MACF1Q9UPN3 7388 aaKnown RBP5.65□□□□□ -1.5
SPG7-201ENST00000268704 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.61□□□□□ -1.51
SPG7-201ENST00000268704 SYNE1Q8NF91 8797 aaKnown RBP5.57□□□□□ -1.52
SPG7-201ENST00000268704 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
SPG7-201ENST00000268704 MT1GP13640 62 aa5.56□□□□□ -1.52
SPG7-201ENST00000268704 SYNE2Q8WXH0 6885 aaKnown RBP5.54□□□□□ -1.52
SPG7-201ENST00000268704 OBSCNQ5VST9 7968 aa5.51□□□□□ -1.53
SPG7-201ENST00000268704 KRTAP9-7A8MTY7 169 aa5.42□□□□□ -1.54
SPG7-201ENST00000268704 MT1MQ8N339 61 aa5.42□□□□□ -1.54
SPG7-201ENST00000268704 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
SPG7-201ENST00000268704 KRTAP19-3Q7Z4W3 81 aa5.37□□□□□ -1.55
SPG7-201ENST00000268704 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
SPG7-201ENST00000268704 KRTAP5-9P26371 169 aa5.26□□□□□ -1.57
SPG7-201ENST00000268704 SPRR2FQ96RM1 72 aa5.26□□□□□ -1.57
SPG7-201ENST00000268704 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
SPG7-201ENST00000268704 LCE3BQ5TA77 95 aa5.2□□□□□ -1.58
SPG7-201ENST00000268704 MDN1Q9NU22 5596 aa5.18□□□□□ -1.58
SPG7-201ENST00000268704 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
SPG7-201ENST00000268704 SPRR2EP22531 72 aa5.07□□□□□ -1.6
SPG7-201ENST00000268704 SPRR2BP35325 72 aa5.07□□□□□ -1.6
SPG7-201ENST00000268704 SPRR2AP35326 72 aa5.07□□□□□ -1.6
SPG7-201ENST00000268704 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
SPG7-201ENST00000268704 NEBP20929 6669 aa5.04□□□□□ -1.6
SPG7-201ENST00000268704 KRTAP6-1Q3LI64 71 aa5.01□□□□□ -1.61
SPG7-201ENST00000268704 SPRR2DP22532 72 aa4.88□□□□□ -1.63
SPG7-201ENST00000268704 MT1AP04731 61 aa4.88□□□□□ -1.63
SPG7-201ENST00000268704 PRM1P04553 51 aa4.86□□□□□ -1.63
SPG7-201ENST00000268704 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
SPG7-201ENST00000268704 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
SPG7-201ENST00000268704 KRTAP5-5Q701N2 237 aaPredicted RBP4.78□□□□□ -1.64
SPG7-201ENST00000268704 KRTAP20-1Q3LI63 56 aa4.77□□□□□ -1.65
SPG7-201ENST00000268704 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
SPG7-201ENST00000268704 KRTAP9-4Q9BYQ2 154 aa4.55□□□□□ -1.68
SPG7-201ENST00000268704 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
SPG7-201ENST00000268704 MT3P25713 68 aa4.33□□□□□ -1.72
SPG7-201ENST00000268704 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
SPG7-201ENST00000268704 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
SPG7-201ENST00000268704 MT4P47944 62 aa4.29□□□□□ -1.72
SPG7-201ENST00000268704 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
SPG7-201ENST00000268704 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
SPG7-201ENST00000268704 KRTAP4-6Q9BYQ5 205 aa4.21□□□□□ -1.74
SPG7-201ENST00000268704 HMCN1Q96RW7 5635 aa4.19□□□□□ -1.74
SPG7-201ENST00000268704 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
SPG7-201ENST00000268704 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
SPG7-201ENST00000268704 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
SPG7-201ENST00000268704 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
SPG7-201ENST00000268704 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
SPG7-201ENST00000268704 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
SPG7-201ENST00000268704 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
SPG7-201ENST00000268704 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
SPG7-201ENST00000268704 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
SPG7-201ENST00000268704 KRTAP5-10Q6L8G5 202 aa3.72□□□□□ -1.81
SPG7-201ENST00000268704 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
SPG7-201ENST00000268704 KRTAP5-8O75690 187 aa3.49□□□□□ -1.85
SPG7-201ENST00000268704 KRTAP5-7Q6L8G8 165 aa3.48□□□□□ -1.85
SPG7-201ENST00000268704 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
SPG7-201ENST00000268704 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
SPG7-201ENST00000268704 LCE1CQ5T751 118 aa3.28□□□□□ -1.89
SPG7-201ENST00000268704 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
SPG7-201ENST00000268704 KRTAP21-2Q3LI59 83 aa3.19□□□□□ -1.9
SPG7-201ENST00000268704 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
SPG7-201ENST00000268704 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
SPG7-201ENST00000268704 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
SPG7-201ENST00000268704 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
SPG7-201ENST00000268704 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
SPG7-201ENST00000268704 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
SPG7-201ENST00000268704 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
SPG7-201ENST00000268704 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
SPG7-201ENST00000268704 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms