RNA–Protein interactions for RNA: ENST00000267811.9

TCF12-201, Transcript of transcription factor 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TCF12, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-201ENST00000267811 UBR4Q5T4S7 5183 aa4.38□□□□□ -1.71
TCF12-201ENST00000267811 SYNE2Q8WXH0 6885 aaKnown RBP4.34□□□□□ -1.72
TCF12-201ENST00000267811 LCE2AQ5TA79 106 aaPredicted RBP4.33□□□□□ -1.72
TCF12-201ENST00000267811 MT1MQ8N339 61 aa4.32□□□□□ -1.72
TCF12-201ENST00000267811 LCE1BQ5T7P3 118 aa4.31□□□□□ -1.72
TCF12-201ENST00000267811 LCE3EQ5T5B0 92 aa4.3□□□□□ -1.72
TCF12-201ENST00000267811 LCE1DQ5T752 114 aa4.28□□□□□ -1.72
TCF12-201ENST00000267811 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
TCF12-201ENST00000267811 MT3P25713 68 aa4.26□□□□□ -1.73
TCF12-201ENST00000267811 TNXBP22105 4242 aa4.25□□□□□ -1.73
TCF12-201ENST00000267811 LOC100996750A0A140TA64 210 aa4.24□□□□□ -1.73
TCF12-201ENST00000267811 FAT4Q6V0I7 4981 aa4.24□□□□□ -1.73
TCF12-201ENST00000267811 RNF213Q63HN8 5207 aa4.21□□□□□ -1.74
TCF12-201ENST00000267811 FLGP20930 4061 aaPredicted RBP4.2□□□□□ -1.74
TCF12-201ENST00000267811 MUC2Q02817 5179 aa4.19□□□□□ -1.74
TCF12-201ENST00000267811 MUC17Q685J3 4493 aa4.17□□□□□ -1.74
TCF12-201ENST00000267811 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.16□□□□□ -1.74
TCF12-201ENST00000267811 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.75
TCF12-201ENST00000267811 KRTAP6-3Q3LI67 103 aa4.13□□□□□ -1.75
TCF12-201ENST00000267811 KRTAP2-3P0C7H8 128 aa4.13□□□□□ -1.75
TCF12-201ENST00000267811 KRTAP2-4Q9BYR9 128 aa4.13□□□□□ -1.75
TCF12-201ENST00000267811 KRTAP4-9Q9BYQ8 210 aa4.1□□□□□ -1.75
TCF12-201ENST00000267811 LCE5AQ5TCM9 118 aa4.09□□□□□ -1.75
TCF12-201ENST00000267811 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
TCF12-201ENST00000267811 KRTAP2-1Q9BYU5 128 aa3.97□□□□□ -1.77
TCF12-201ENST00000267811 HMCN2Q8NDA2 5059 aa3.97□□□□□ -1.77
TCF12-201ENST00000267811 KRTAP19-7Q3SYF9 63 aa3.96□□□□□ -1.78
TCF12-201ENST00000267811 MT1AP04731 61 aa3.94□□□□□ -1.78
TCF12-201ENST00000267811 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
TCF12-201ENST00000267811 PRM1P04553 51 aa3.89□□□□□ -1.79
TCF12-201ENST00000267811 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
TCF12-201ENST00000267811 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
TCF12-201ENST00000267811 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
TCF12-201ENST00000267811 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
TCF12-201ENST00000267811 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
TCF12-201ENST00000267811 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
TCF12-201ENST00000267811 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
TCF12-201ENST00000267811 KRTAP9-4Q9BYQ2 154 aa3.67□□□□□ -1.82
TCF12-201ENST00000267811 MACF1Q9UPN3 7388 aaKnown RBP3.62□□□□□ -1.83
TCF12-201ENST00000267811 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
TCF12-201ENST00000267811 NEBP20929 6669 aa3.59□□□□□ -1.83
TCF12-201ENST00000267811 USH2AO75445 5202 aa3.57□□□□□ -1.84
TCF12-201ENST00000267811 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
TCF12-201ENST00000267811 KMT2DO14686 5537 aa3.5□□□□□ -1.85
TCF12-201ENST00000267811 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
TCF12-201ENST00000267811 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
TCF12-201ENST00000267811 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.87
TCF12-201ENST00000267811 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
TCF12-201ENST00000267811 SSPOA2VEC9 5147 aa3.31□□□□□ -1.88
TCF12-201ENST00000267811 KRTAP5-9P26371 169 aa3.31□□□□□ -1.88
TCF12-201ENST00000267811 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
TCF12-201ENST00000267811 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
TCF12-201ENST00000267811 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.91
TCF12-201ENST00000267811 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.92
TCF12-201ENST00000267811 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.92
TCF12-201ENST00000267811 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
TCF12-201ENST00000267811 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
TCF12-201ENST00000267811 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
TCF12-201ENST00000267811 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
TCF12-201ENST00000267811 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
TCF12-201ENST00000267811 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
TCF12-201ENST00000267811 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
TCF12-201ENST00000267811 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -1.99
TCF12-201ENST00000267811 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
TCF12-201ENST00000267811 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
TCF12-201ENST00000267811 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
TCF12-201ENST00000267811 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
TCF12-201ENST00000267811 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
TCF12-201ENST00000267811 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
TCF12-201ENST00000267811 KRTAP5-10Q6L8G5 202 aa2.01□□□□□ -2.09
TCF12-201ENST00000267811 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
TCF12-201ENST00000267811 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
TCF12-201ENST00000267811 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
TCF12-201ENST00000267811 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
TCF12-201ENST00000267811 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
TCF12-201ENST00000267811 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
TCF12-201ENST00000267811 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms