RNA–Protein interactions for RNA: ENST00000264638.8

CNTNAP1-201, Transcript of contactin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP1, Length 5,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-201ENST00000264638 MT1MQ8N339 61 aa4.21□□□□□ -1.74
CNTNAP1-201ENST00000264638 PRM1P04553 51 aa4.15□□□□□ -1.75
CNTNAP1-201ENST00000264638 RNF213Q63HN8 5207 aa4.14□□□□□ -1.75
CNTNAP1-201ENST00000264638 UBR4Q5T4S7 5183 aa4.13□□□□□ -1.75
CNTNAP1-201ENST00000264638 MT3P25713 68 aa4.12□□□□□ -1.75
CNTNAP1-201ENST00000264638 FAT4Q6V0I7 4981 aa4.12□□□□□ -1.75
CNTNAP1-201ENST00000264638 KRTAP9-6A0A140TA67 174 aa4.08□□□□□ -1.76
CNTNAP1-201ENST00000264638 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
CNTNAP1-201ENST00000264638 KRTAP2-3P0C7H8 128 aa4.04□□□□□ -1.76
CNTNAP1-201ENST00000264638 KRTAP2-4Q9BYR9 128 aa4.04□□□□□ -1.76
CNTNAP1-201ENST00000264638 KRTAP2-1Q9BYU5 128 aa4.04□□□□□ -1.76
CNTNAP1-201ENST00000264638 MT4P47944 62 aa4.03□□□□□ -1.76
CNTNAP1-201ENST00000264638 KRTAP19-7Q3SYF9 63 aa4.02□□□□□ -1.77
CNTNAP1-201ENST00000264638 HMCN2Q8NDA2 5059 aa3.97□□□□□ -1.77
CNTNAP1-201ENST00000264638 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
CNTNAP1-201ENST00000264638 LOC100996750A0A140TA64 210 aa3.96□□□□□ -1.78
CNTNAP1-201ENST00000264638 MT1AP04731 61 aa3.93□□□□□ -1.78
CNTNAP1-201ENST00000264638 FSIP2Q5CZC0 6907 aa3.92□□□□□ -1.78
CNTNAP1-201ENST00000264638 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
CNTNAP1-201ENST00000264638 MUC2Q02817 5179 aa3.9□□□□□ -1.78
CNTNAP1-201ENST00000264638 KRTAP6-3Q3LI67 103 aa3.88□□□□□ -1.79
CNTNAP1-201ENST00000264638 KRTAP9-7A8MTY7 169 aa3.85□□□□□ -1.79
CNTNAP1-201ENST00000264638 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
CNTNAP1-201ENST00000264638 LCE1DQ5T752 114 aa3.81□□□□□ -1.8
CNTNAP1-201ENST00000264638 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
CNTNAP1-201ENST00000264638 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
CNTNAP1-201ENST00000264638 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.73□□□□□ -1.81
CNTNAP1-201ENST00000264638 SYNE2Q8WXH0 6885 aaKnown RBP3.73□□□□□ -1.81
CNTNAP1-201ENST00000264638 LCE5AQ5TCM9 118 aa3.72□□□□□ -1.81
CNTNAP1-201ENST00000264638 LCE4AQ5TA78 99 aa3.68□□□□□ -1.82
CNTNAP1-201ENST00000264638 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.83
CNTNAP1-201ENST00000264638 KRTAP4-9Q9BYQ8 210 aa3.65□□□□□ -1.83
CNTNAP1-201ENST00000264638 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
CNTNAP1-201ENST00000264638 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
CNTNAP1-201ENST00000264638 KRTAP9-4Q9BYQ2 154 aa3.61□□□□□ -1.83
CNTNAP1-201ENST00000264638 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
CNTNAP1-201ENST00000264638 USH2AO75445 5202 aa3.44□□□□□ -1.86
CNTNAP1-201ENST00000264638 KRTAP5-9P26371 169 aa3.33□□□□□ -1.88
CNTNAP1-201ENST00000264638 FCGBPQ9Y6R7 5405 aaPredicted RBP3.33□□□□□ -1.88
CNTNAP1-201ENST00000264638 KMT2DO14686 5537 aa3.27□□□□□ -1.89
CNTNAP1-201ENST00000264638 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
CNTNAP1-201ENST00000264638 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
CNTNAP1-201ENST00000264638 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
CNTNAP1-201ENST00000264638 DSTQ03001 7570 aaKnown RBP3.24□□□□□ -1.89
CNTNAP1-201ENST00000264638 NEBP20929 6669 aa3.22□□□□□ -1.89
CNTNAP1-201ENST00000264638 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
CNTNAP1-201ENST00000264638 MACF1Q9UPN3 7388 aaKnown RBP3.18□□□□□ -1.9
CNTNAP1-201ENST00000264638 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
CNTNAP1-201ENST00000264638 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
CNTNAP1-201ENST00000264638 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
CNTNAP1-201ENST00000264638 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
CNTNAP1-201ENST00000264638 MDN1Q9NU22 5596 aa3.03□□□□□ -1.92
CNTNAP1-201ENST00000264638 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
CNTNAP1-201ENST00000264638 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
CNTNAP1-201ENST00000264638 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
CNTNAP1-201ENST00000264638 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
CNTNAP1-201ENST00000264638 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
CNTNAP1-201ENST00000264638 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
CNTNAP1-201ENST00000264638 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
CNTNAP1-201ENST00000264638 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
CNTNAP1-201ENST00000264638 KRTAP5-3Q6L8H2 238 aa2.54□□□□□ -2
CNTNAP1-201ENST00000264638 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
CNTNAP1-201ENST00000264638 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
CNTNAP1-201ENST00000264638 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.02
CNTNAP1-201ENST00000264638 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
CNTNAP1-201ENST00000264638 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
CNTNAP1-201ENST00000264638 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
CNTNAP1-201ENST00000264638 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.07
CNTNAP1-201ENST00000264638 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
CNTNAP1-201ENST00000264638 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
CNTNAP1-201ENST00000264638 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
CNTNAP1-201ENST00000264638 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
CNTNAP1-201ENST00000264638 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
CNTNAP1-201ENST00000264638 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
CNTNAP1-201ENST00000264638 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.11
CNTNAP1-201ENST00000264638 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
CNTNAP1-201ENST00000264638 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 95.1 ms