RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 EPPK1P58107 5090 aaKnown RBP5.44□□□□□ -1.54
ITGA6-201ENST00000264107 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
ITGA6-201ENST00000264107 MT1MQ8N339 61 aa5.31□□□□□ -1.56
ITGA6-201ENST00000264107 KRTAP4-3Q9BYR4 195 aa5.27□□□□□ -1.57
ITGA6-201ENST00000264107 KRTAP4-9Q9BYQ8 210 aa5.27□□□□□ -1.57
ITGA6-201ENST00000264107 MT3P25713 68 aa5.27□□□□□ -1.57
ITGA6-201ENST00000264107 FAT4Q6V0I7 4981 aa5.26□□□□□ -1.57
ITGA6-201ENST00000264107 KRTAP19-6Q3LI70 58 aa5.24□□□□□ -1.57
ITGA6-201ENST00000264107 UBR4Q5T4S7 5183 aa5.23□□□□□ -1.57
ITGA6-201ENST00000264107 RNF213Q63HN8 5207 aa5.2□□□□□ -1.58
ITGA6-201ENST00000264107 FSIP2Q5CZC0 6907 aa5.15□□□□□ -1.59
ITGA6-201ENST00000264107 LCE2AQ5TA79 106 aaPredicted RBP5.15□□□□□ -1.59
ITGA6-201ENST00000264107 HMCN2Q8NDA2 5059 aa5.15□□□□□ -1.59
ITGA6-201ENST00000264107 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
ITGA6-201ENST00000264107 KRTAP19-7Q3SYF9 63 aa5.11□□□□□ -1.59
ITGA6-201ENST00000264107 KRTAP6-2Q3LI66 62 aa5.05□□□□□ -1.6
ITGA6-201ENST00000264107 KRTAP9-2Q9BYQ4 174 aa5.04□□□□□ -1.6
ITGA6-201ENST00000264107 LCE2DQ5TA82 110 aaPredicted RBP5.02□□□□□ -1.61
ITGA6-201ENST00000264107 MT1AP04731 61 aa5.02□□□□□ -1.61
ITGA6-201ENST00000264107 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
ITGA6-201ENST00000264107 LCE1BQ5T7P3 118 aa4.99□□□□□ -1.61
ITGA6-201ENST00000264107 LCE1DQ5T752 114 aa4.94□□□□□ -1.62
ITGA6-201ENST00000264107 MUC2Q02817 5179 aa4.93□□□□□ -1.62
ITGA6-201ENST00000264107 MT4P47944 62 aa4.89□□□□□ -1.63
ITGA6-201ENST00000264107 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
ITGA6-201ENST00000264107 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
ITGA6-201ENST00000264107 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
ITGA6-201ENST00000264107 KRTAP9-6A0A140TA67 174 aa4.68□□□□□ -1.66
ITGA6-201ENST00000264107 SYNE2Q8WXH0 6885 aaKnown RBP4.65□□□□□ -1.67
ITGA6-201ENST00000264107 LCE1AQ5T7P2 110 aa4.59□□□□□ -1.67
ITGA6-201ENST00000264107 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
ITGA6-201ENST00000264107 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
ITGA6-201ENST00000264107 KRTAP6-3Q3LI67 103 aa4.51□□□□□ -1.69
ITGA6-201ENST00000264107 FCGBPQ9Y6R7 5405 aaPredicted RBP4.44□□□□□ -1.7
ITGA6-201ENST00000264107 USH2AO75445 5202 aa4.43□□□□□ -1.7
ITGA6-201ENST00000264107 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.71
ITGA6-201ENST00000264107 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.39□□□□□ -1.71
ITGA6-201ENST00000264107 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
ITGA6-201ENST00000264107 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
ITGA6-201ENST00000264107 KMT2DO14686 5537 aa4.29□□□□□ -1.72
ITGA6-201ENST00000264107 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
ITGA6-201ENST00000264107 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
ITGA6-201ENST00000264107 MACF1Q9UPN3 7388 aaKnown RBP4.09□□□□□ -1.75
ITGA6-201ENST00000264107 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
ITGA6-201ENST00000264107 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
ITGA6-201ENST00000264107 SSPOA2VEC9 5147 aa4.05□□□□□ -1.76
ITGA6-201ENST00000264107 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
ITGA6-201ENST00000264107 MUC12Q9UKN1 5478 aa4.01□□□□□ -1.77
ITGA6-201ENST00000264107 MUC19Q7Z5P9 8384 aa4.01□□□□□ -1.77
ITGA6-201ENST00000264107 KRTAP5-9P26371 169 aa4□□□□□ -1.77
ITGA6-201ENST00000264107 NEBP20929 6669 aa3.84□□□□□ -1.79
ITGA6-201ENST00000264107 KRTAP4-6Q9BYQ5 205 aa3.79□□□□□ -1.8
ITGA6-201ENST00000264107 MDN1Q9NU22 5596 aa3.78□□□□□ -1.8
ITGA6-201ENST00000264107 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
ITGA6-201ENST00000264107 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
ITGA6-201ENST00000264107 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
ITGA6-201ENST00000264107 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
ITGA6-201ENST00000264107 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
ITGA6-201ENST00000264107 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
ITGA6-201ENST00000264107 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
ITGA6-201ENST00000264107 MUC5ACP98088 5654 aa3.17□□□□□ -1.9
ITGA6-201ENST00000264107 HMCN1Q96RW7 5635 aa3.03□□□□□ -1.92
ITGA6-201ENST00000264107 KRTAP5-3Q6L8H2 238 aa3□□□□□ -1.93
ITGA6-201ENST00000264107 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
ITGA6-201ENST00000264107 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
ITGA6-201ENST00000264107 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
ITGA6-201ENST00000264107 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
ITGA6-201ENST00000264107 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
ITGA6-201ENST00000264107 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
ITGA6-201ENST00000264107 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
ITGA6-201ENST00000264107 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
ITGA6-201ENST00000264107 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
ITGA6-201ENST00000264107 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
ITGA6-201ENST00000264107 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
ITGA6-201ENST00000264107 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
ITGA6-201ENST00000264107 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
ITGA6-201ENST00000264107 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 80.5 ms