RNA–Protein interactions for RNA: ENST00000262659.12

CCM2L-201, Transcript of CCM2 like scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCM2L, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2L-201ENST00000262659 MT1GP13640 62 aa7.47□□□□□ -1.21
CCM2L-201ENST00000262659 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
CCM2L-201ENST00000262659 SSPOA2VEC9 5147 aa7.3□□□□□ -1.24
CCM2L-201ENST00000262659 KRTAP4-9Q9BYQ8 210 aa7.24□□□□□ -1.25
CCM2L-201ENST00000262659 KRTAP9-2Q9BYQ4 174 aa7.2□□□□□ -1.26
CCM2L-201ENST00000262659 LCE3BQ5TA77 95 aa7.15□□□□□ -1.26
CCM2L-201ENST00000262659 KRTAP9-7A8MTY7 169 aa7.13□□□□□ -1.27
CCM2L-201ENST00000262659 PRM1P04553 51 aa7.1□□□□□ -1.27
CCM2L-201ENST00000262659 MT1MQ8N339 61 aa7.1□□□□□ -1.27
CCM2L-201ENST00000262659 FSIP2Q5CZC0 6907 aa7.05□□□□□ -1.28
CCM2L-201ENST00000262659 SYNE1Q8NF91 8797 aaKnown RBP7.05□□□□□ -1.28
CCM2L-201ENST00000262659 FCGBPQ9Y6R7 5405 aaPredicted RBP7.03□□□□□ -1.28
CCM2L-201ENST00000262659 KRTAP5-5Q701N2 237 aaPredicted RBP7.02□□□□□ -1.29
CCM2L-201ENST00000262659 LCE2DQ5TA82 110 aaPredicted RBP7.02□□□□□ -1.29
CCM2L-201ENST00000262659 MUC12Q9UKN1 5478 aa7□□□□□ -1.29
CCM2L-201ENST00000262659 KRTAP19-6Q3LI70 58 aa7□□□□□ -1.29
CCM2L-201ENST00000262659 MT1AP04731 61 aa6.97□□□□□ -1.29
CCM2L-201ENST00000262659 DSTQ03001 7570 aaKnown RBP6.97□□□□□ -1.29
CCM2L-201ENST00000262659 KRTAP19-3Q7Z4W3 81 aa6.94□□□□□ -1.3
CCM2L-201ENST00000262659 LCE3DQ9BYE3 92 aa6.93□□□□□ -1.3
CCM2L-201ENST00000262659 LCE3EQ5T5B0 92 aa6.91□□□□□ -1.3
CCM2L-201ENST00000262659 KRTAP6-3Q3LI67 103 aa6.9□□□□□ -1.31
CCM2L-201ENST00000262659 KRTAP9-6A0A140TA67 174 aa6.87□□□□□ -1.31
CCM2L-201ENST00000262659 KRTAP6-1Q3LI64 71 aa6.7□□□□□ -1.34
CCM2L-201ENST00000262659 LCE1AQ5T7P2 110 aa6.68□□□□□ -1.34
CCM2L-201ENST00000262659 KRTAP2-2Q9BYT5 123 aa6.66□□□□□ -1.34
CCM2L-201ENST00000262659 LCE5AQ5TCM9 118 aa6.6□□□□□ -1.35
CCM2L-201ENST00000262659 KRTAP6-2Q3LI66 62 aa6.59□□□□□ -1.35
CCM2L-201ENST00000262659 SPRR2FQ96RM1 72 aa6.51□□□□□ -1.37
CCM2L-201ENST00000262659 MACF1Q9UPN3 7388 aaKnown RBP6.32□□□□□ -1.4
CCM2L-201ENST00000262659 OBSCNQ5VST9 7968 aa6.28□□□□□ -1.4
CCM2L-201ENST00000262659 SYNE2Q8WXH0 6885 aaKnown RBP6.26□□□□□ -1.41
CCM2L-201ENST00000262659 MDN1Q9NU22 5596 aa6.19□□□□□ -1.42
CCM2L-201ENST00000262659 LCE1EQ5T753 118 aa6.19□□□□□ -1.42
CCM2L-201ENST00000262659 KRTAP9-4Q9BYQ2 154 aa6.03□□□□□ -1.44
CCM2L-201ENST00000262659 LCE1DQ5T752 114 aa5.96□□□□□ -1.45
CCM2L-201ENST00000262659 KRTAP5-9P26371 169 aa5.85□□□□□ -1.47
CCM2L-201ENST00000262659 SPRR2AP35326 72 aa5.82□□□□□ -1.48
CCM2L-201ENST00000262659 SPRR2EP22531 72 aa5.81□□□□□ -1.48
CCM2L-201ENST00000262659 SPRR2BP35325 72 aa5.81□□□□□ -1.48
CCM2L-201ENST00000262659 MT3P25713 68 aa5.75□□□□□ -1.49
CCM2L-201ENST00000262659 SPRR2DP22532 72 aa5.53□□□□□ -1.52
CCM2L-201ENST00000262659 KRTAP4-11Q9BYQ6 195 aa5.31□□□□□ -1.56
CCM2L-201ENST00000262659 KRTAP5-4Q6L8H1 288 aa5.16□□□□□ -1.58
CCM2L-201ENST00000262659 MUC5ACP98088 5654 aa5.13□□□□□ -1.59
CCM2L-201ENST00000262659 KRTAP4-6Q9BYQ5 205 aa5.06□□□□□ -1.6
CCM2L-201ENST00000262659 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.03□□□□□ -1.6
CCM2L-201ENST00000262659 LCE1FQ5T754 118 aa4.97□□□□□ -1.61
CCM2L-201ENST00000262659 MT4P47944 62 aa4.96□□□□□ -1.62
CCM2L-201ENST00000262659 KRTAP5-10Q6L8G5 202 aa4.96□□□□□ -1.62
CCM2L-201ENST00000262659 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
CCM2L-201ENST00000262659 KRTAP20-2Q3LI61 65 aa4.88□□□□□ -1.63
CCM2L-201ENST00000262659 NEBP20929 6669 aa4.81□□□□□ -1.64
CCM2L-201ENST00000262659 HMCN1Q96RW7 5635 aa4.71□□□□□ -1.66
CCM2L-201ENST00000262659 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
CCM2L-201ENST00000262659 KRTAP5-1Q6L8H4 278 aa4.7□□□□□ -1.66
CCM2L-201ENST00000262659 LCE1BQ5T7P3 118 aa4.65□□□□□ -1.67
CCM2L-201ENST00000262659 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
CCM2L-201ENST00000262659 MUC19Q7Z5P9 8384 aa4.55□□□□□ -1.68
CCM2L-201ENST00000262659 KRTAP21-1Q3LI58 79 aa4.52□□□□□ -1.69
CCM2L-201ENST00000262659 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
CCM2L-201ENST00000262659 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
CCM2L-201ENST00000262659 KRTAP21-2Q3LI59 83 aa4.26□□□□□ -1.73
CCM2L-201ENST00000262659 LCE1CQ5T751 118 aa4.23□□□□□ -1.73
CCM2L-201ENST00000262659 KRTAP4-4Q9BYR3 166 aa4.05□□□□□ -1.76
CCM2L-201ENST00000262659 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
CCM2L-201ENST00000262659 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.8
CCM2L-201ENST00000262659 GPR98Q8WXG9 6306 aa3.8□□□□□ -1.8
CCM2L-201ENST00000262659 KRTAP5-8O75690 187 aa3.76□□□□□ -1.81
CCM2L-201ENST00000262659 KRTAP5-7Q6L8G8 165 aa3.7□□□□□ -1.82
CCM2L-201ENST00000262659 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
CCM2L-201ENST00000262659 AHNAK2Q8IVF2 5795 aa3.59□□□□□ -1.84
CCM2L-201ENST00000262659 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.84
CCM2L-201ENST00000262659 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
CCM2L-201ENST00000262659 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
CCM2L-201ENST00000262659 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
CCM2L-201ENST00000262659 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 59.5 ms