RNA–Protein interactions for RNA: ENST00000261947.4

RNF130-201, Transcript of ring finger protein 130, humanhuman

TSL 1 (best) BASIC

Gene RNF130, Length 1,766 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF130-201ENST00000261947 MDN1Q9NU22 5596 aa9.74□□□□□ -0.85
RNF130-201ENST00000261947 LCE1AQ5T7P2 110 aa9.73□□□□□ -0.85
RNF130-201ENST00000261947 KRTAP19-3Q7Z4W3 81 aa9.71□□□□□ -0.85
RNF130-201ENST00000261947 SPRR2EP22531 72 aa9.7□□□□□ -0.86
RNF130-201ENST00000261947 SPRR2BP35325 72 aa9.7□□□□□ -0.86
RNF130-201ENST00000261947 SPRR2AP35326 72 aa9.7□□□□□ -0.86
RNF130-201ENST00000261947 MT1GP13640 62 aa9.6□□□□□ -0.87
RNF130-201ENST00000261947 LCE5AQ5TCM9 118 aa9.6□□□□□ -0.87
RNF130-201ENST00000261947 KRTAP19-4Q3LI73 84 aa9.5□□□□□ -0.89
RNF130-201ENST00000261947 NEBP20929 6669 aa9.49□□□□□ -0.89
RNF130-201ENST00000261947 MT1MQ8N339 61 aa9.46□□□□□ -0.9
RNF130-201ENST00000261947 LCE3CQ5T5A8 94 aa9.41□□□□□ -0.9
RNF130-201ENST00000261947 KRTAP4-7Q9BYR0 210 aa9.4□□□□□ -0.9
RNF130-201ENST00000261947 SPRR2DP22532 72 aa9.36□□□□□ -0.91
RNF130-201ENST00000261947 KRTAP4-3Q9BYR4 195 aa9.26□□□□□ -0.93
RNF130-201ENST00000261947 DSTQ03001 7570 aaKnown RBP9.16□□□□□ -0.94
RNF130-201ENST00000261947 LCE3BQ5TA77 95 aa9.02□□□□□ -0.97
RNF130-201ENST00000261947 SPRR5A0A1B0GTR4 108 aa8.98□□□□□ -0.97
RNF130-201ENST00000261947 KRTAP2-3P0C7H8 128 aa8.95□□□□□ -0.98
RNF130-201ENST00000261947 KRTAP2-4Q9BYR9 128 aa8.95□□□□□ -0.98
RNF130-201ENST00000261947 KRTAP9-6A8MVA2 160 aa8.89□□□□□ -0.99
RNF130-201ENST00000261947 KRTAP20-1Q3LI63 56 aa8.89□□□□□ -0.99
RNF130-201ENST00000261947 LOC100996750A0A140TA64 210 aa8.85□□□□□ -0.99
RNF130-201ENST00000261947 LUZP6Q538Z0 58 aa8.76□□□□□ -1.01
RNF130-201ENST00000261947 KRTAP2-2Q9BYT5 123 aa8.73□□□□□ -1.01
RNF130-201ENST00000261947 KRTAP2-1Q9BYU5 128 aa8.73□□□□□ -1.01
RNF130-201ENST00000261947 NDUFAF8A1L188 74 aa8.63□□□□□ -1.03
RNF130-201ENST00000261947 KRTAP5-5Q701N2 237 aaPredicted RBP8.58□□□□□ -1.04
RNF130-201ENST00000261947 KRTAP5-4Q6L8H1 288 aa8.38□□□□□ -1.07
RNF130-201ENST00000261947 LCE4AQ5TA78 99 aa8.3□□□□□ -1.08
RNF130-201ENST00000261947 MT1AP04731 61 aa8.3□□□□□ -1.08
RNF130-201ENST00000261947 KRTAP6-1Q3LI64 71 aa8.22□□□□□ -1.09
RNF130-201ENST00000261947 KRTAP4-9Q9BYQ8 210 aa8.16□□□□□ -1.1
RNF130-201ENST00000261947 MT4P47944 62 aa8.14□□□□□ -1.11
RNF130-201ENST00000261947 SYNE1Q8NF91 8797 aaKnown RBP8.13□□□□□ -1.11
RNF130-201ENST00000261947 KRTAP12-4P60329 112 aa8.07□□□□□ -1.12
RNF130-201ENST00000261947 LCE1DQ5T752 114 aa8.07□□□□□ -1.12
RNF130-201ENST00000261947 KRTAP4-6Q9BYQ5 205 aa8.04□□□□□ -1.12
RNF130-201ENST00000261947 KRTAP9-4Q9BYQ2 154 aa7.92□□□□□ -1.14
RNF130-201ENST00000261947 HMCN1Q96RW7 5635 aa7.91□□□□□ -1.14
RNF130-201ENST00000261947 KRTAP20-2Q3LI61 65 aa7.85□□□□□ -1.15
RNF130-201ENST00000261947 H3BS24 57 aa7.72□□□□□ -1.17
RNF130-201ENST00000261947 KRTAP6-2Q3LI66 62 aa7.65□□□□□ -1.18
RNF130-201ENST00000261947 A0A0A0MQY5 61 aa7.6□□□□□ -1.19
RNF130-201ENST00000261947 KRTAP5-3Q6L8H2 238 aa7.59□□□□□ -1.2
RNF130-201ENST00000261947 MT3P25713 68 aa7.54□□□□□ -1.2
RNF130-201ENST00000261947 KRTAP5-2Q701N4 177 aa7.53□□□□□ -1.2
RNF130-201ENST00000261947 AHNAK2Q8IVF2 5795 aa7.16□□□□□ -1.26
RNF130-201ENST00000261947 INE1O15225 51 aa7.1□□□□□ -1.27
RNF130-201ENST00000261947 OBSCNQ5VST9 7968 aa7.1□□□□□ -1.27
RNF130-201ENST00000261947 LCE3DQ9BYE3 92 aa7□□□□□ -1.29
RNF130-201ENST00000261947 KRTAP5-10Q6L8G5 202 aa6.92□□□□□ -1.3
RNF130-201ENST00000261947 KRTAP4-11Q9BYQ6 195 aa6.9□□□□□ -1.3
RNF130-201ENST00000261947 LCE3EQ5T5B0 92 aa6.76□□□□□ -1.33
RNF130-201ENST00000261947 GPR98Q8WXG9 6306 aa6.75□□□□□ -1.33
RNF130-201ENST00000261947 KRTAP5-8O75690 187 aa6.65□□□□□ -1.34
RNF130-201ENST00000261947 LCE1EQ5T753 118 aa6.65□□□□□ -1.34
RNF130-201ENST00000261947 KRTAP5-1Q6L8H4 278 aa6.58□□□□□ -1.36
RNF130-201ENST00000261947 KRTAP5-7Q6L8G8 165 aa6.47□□□□□ -1.37
RNF130-201ENST00000261947 MUC5ACP98088 5654 aa6.31□□□□□ -1.4
RNF130-201ENST00000261947 LCE1BQ5T7P3 118 aa6.23□□□□□ -1.41
RNF130-201ENST00000261947 KRTAP4-2Q9BYR5 136 aa6.21□□□□□ -1.41
RNF130-201ENST00000261947 LCE1CQ5T751 118 aa6.18□□□□□ -1.42
RNF130-201ENST00000261947 KRTAP9-9Q9BYP9 154 aa6.08□□□□□ -1.44
RNF130-201ENST00000261947 MUC5BQ9HC84 5762 aaPredicted RBP5.76□□□□□ -1.49
RNF130-201ENST00000261947 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.75□□□□□ -1.49
RNF130-201ENST00000261947 PRM1P04553 51 aa5.72□□□□□ -1.49
RNF130-201ENST00000261947 KRTAP4-12Q9BQ66 201 aa5.7□□□□□ -1.5
RNF130-201ENST00000261947 AHNAKQ09666 5890 aaKnown RBP5.51□□□□□ -1.53
RNF130-201ENST00000261947 KRTAP5-11Q6L8G4 156 aa5.5□□□□□ -1.53
RNF130-201ENST00000261947 KRTAP21-2Q3LI59 83 aa5.4□□□□□ -1.54
RNF130-201ENST00000261947 LCE1FQ5T754 118 aa5.06□□□□□ -1.6
RNF130-201ENST00000261947 KRTAP4-4Q9BYR3 166 aa4.83□□□□□ -1.64
RNF130-201ENST00000261947 PHGR1C9JFL3 82 aa4.73□□□□□ -1.65
RNF130-201ENST00000261947 MUC19Q7Z5P9 8384 aa4.28□□□□□ -1.72
RNF130-201ENST00000261947 KRTAP21-1Q3LI58 79 aa3.51□□□□□ -1.85
RNF130-201ENST00000261947 MUC16Q8WXI7 14507 aa3.01□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 9.1 ms