RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 KRTAP5-9P26371 169 aa6.63□□□□□ -1.35
SSB-201ENST00000260956 NEBP20929 6669 aa6.59□□□□□ -1.35
SSB-201ENST00000260956 KRTAP19-5Q3LI72 72 aa6.59□□□□□ -1.36
SSB-201ENST00000260956 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
SSB-201ENST00000260956 LUZP6Q538Z0 58 aa6.58□□□□□ -1.36
SSB-201ENST00000260956 KRTAP4-12Q9BQ66 201 aa6.55□□□□□ -1.36
SSB-201ENST00000260956 SPRR2FQ96RM1 72 aa6.49□□□□□ -1.37
SSB-201ENST00000260956 KRTAP19-7Q3SYF9 63 aa6.46□□□□□ -1.38
SSB-201ENST00000260956 LCE3BQ5TA77 95 aa6.4□□□□□ -1.38
SSB-201ENST00000260956 LCE3CQ5T5A8 94 aa6.33□□□□□ -1.4
SSB-201ENST00000260956 LCE1AQ5T7P2 110 aa6.33□□□□□ -1.4
SSB-201ENST00000260956 SPRR2EP22531 72 aa6.31□□□□□ -1.4
SSB-201ENST00000260956 SPRR2BP35325 72 aa6.31□□□□□ -1.4
SSB-201ENST00000260956 SPRR2AP35326 72 aa6.31□□□□□ -1.4
SSB-201ENST00000260956 MT1EP04732 61 aa6.29□□□□□ -1.4
SSB-201ENST00000260956 MT1LQ93083 61 aa6.23□□□□□ -1.41
SSB-201ENST00000260956 LCE4AQ5TA78 99 aa6.22□□□□□ -1.41
SSB-201ENST00000260956 KRTAP9-9Q9BYP9 154 aa6.2□□□□□ -1.42
SSB-201ENST00000260956 KRTAP9-4Q9BYQ2 154 aa6.2□□□□□ -1.42
SSB-201ENST00000260956 KRTAP9-6A8MVA2 160 aa6.15□□□□□ -1.42
SSB-201ENST00000260956 KRTAP20-1Q3LI63 56 aa6.13□□□□□ -1.43
SSB-201ENST00000260956 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
SSB-201ENST00000260956 SPRR2DP22532 72 aa6.08□□□□□ -1.44
SSB-201ENST00000260956 KRTAP2-3P0C7H8 128 aa6.05□□□□□ -1.44
SSB-201ENST00000260956 KRTAP2-4Q9BYR9 128 aa6.05□□□□□ -1.44
SSB-201ENST00000260956 LCE5AQ5TCM9 118 aa6.02□□□□□ -1.45
SSB-201ENST00000260956 A0A0A0MQY5 61 aa6.02□□□□□ -1.45
SSB-201ENST00000260956 KRTAP19-3Q7Z4W3 81 aa6.02□□□□□ -1.45
SSB-201ENST00000260956 DSTQ03001 7570 aaKnown RBP6□□□□□ -1.45
SSB-201ENST00000260956 LCE1DQ5T752 114 aa5.97□□□□□ -1.45
SSB-201ENST00000260956 MT1GP13640 62 aa5.88□□□□□ -1.47
SSB-201ENST00000260956 MT1MQ8N339 61 aa5.88□□□□□ -1.47
SSB-201ENST00000260956 KRTAP2-2Q9BYT5 123 aa5.88□□□□□ -1.47
SSB-201ENST00000260956 KRTAP2-1Q9BYU5 128 aa5.88□□□□□ -1.47
SSB-201ENST00000260956 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.47
SSB-201ENST00000260956 KRTAP4-9Q9BYQ8 210 aa5.75□□□□□ -1.49
SSB-201ENST00000260956 INE1O15225 51 aa5.63□□□□□ -1.51
SSB-201ENST00000260956 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
SSB-201ENST00000260956 KRTAP4-2Q9BYR5 136 aa5.52□□□□□ -1.53
SSB-201ENST00000260956 KRTAP5-4Q6L8H1 288 aa5.4□□□□□ -1.54
SSB-201ENST00000260956 HMCN1Q96RW7 5635 aa5.39□□□□□ -1.55
SSB-201ENST00000260956 KRTAP5-5Q701N2 237 aaPredicted RBP5.35□□□□□ -1.55
SSB-201ENST00000260956 MT4P47944 62 aa5.34□□□□□ -1.55
SSB-201ENST00000260956 MT1AP04731 61 aa5.26□□□□□ -1.57
SSB-201ENST00000260956 KRTAP6-1Q3LI64 71 aa5.25□□□□□ -1.57
SSB-201ENST00000260956 SYNE1Q8NF91 8797 aaKnown RBP5.16□□□□□ -1.58
SSB-201ENST00000260956 GPR98Q8WXG9 6306 aa5.12□□□□□ -1.59
SSB-201ENST00000260956 KRTAP20-2Q3LI61 65 aa5.07□□□□□ -1.6
SSB-201ENST00000260956 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
SSB-201ENST00000260956 AHNAK2Q8IVF2 5795 aa5.02□□□□□ -1.61
SSB-201ENST00000260956 KRTAP5-3Q6L8H2 238 aa4.94□□□□□ -1.62
SSB-201ENST00000260956 KRTAP5-10Q6L8G5 202 aa4.84□□□□□ -1.63
SSB-201ENST00000260956 KRTAP5-2Q701N4 177 aa4.78□□□□□ -1.64
SSB-201ENST00000260956 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
SSB-201ENST00000260956 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
SSB-201ENST00000260956 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
SSB-201ENST00000260956 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
SSB-201ENST00000260956 MT3P25713 68 aa4.67□□□□□ -1.66
SSB-201ENST00000260956 KRTAP5-7Q6L8G8 165 aa4.58□□□□□ -1.68
SSB-201ENST00000260956 KRTAP5-8O75690 187 aa4.42□□□□□ -1.7
SSB-201ENST00000260956 PRM1P04553 51 aa4.32□□□□□ -1.72
SSB-201ENST00000260956 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
SSB-201ENST00000260956 MUC5ACP98088 5654 aa4.18□□□□□ -1.74
SSB-201ENST00000260956 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
SSB-201ENST00000260956 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
SSB-201ENST00000260956 AHNAKQ09666 5890 aaKnown RBP4.02□□□□□ -1.77
SSB-201ENST00000260956 LCE1FQ5T754 118 aa4□□□□□ -1.77
SSB-201ENST00000260956 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
SSB-201ENST00000260956 LCE1CQ5T751 118 aa3.84□□□□□ -1.8
SSB-201ENST00000260956 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
SSB-201ENST00000260956 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.83
SSB-201ENST00000260956 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
SSB-201ENST00000260956 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
SSB-201ENST00000260956 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
SSB-201ENST00000260956 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
SSB-201ENST00000260956 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
SSB-201ENST00000260956 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 103.8 ms