RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 KRTAP4-3Q9BYR4 195 aa4.78□□□□□ -1.64
SHTN1-201ENST00000260777 KRTAP2-3P0C7H8 128 aa4.76□□□□□ -1.65
SHTN1-201ENST00000260777 KRTAP2-4Q9BYR9 128 aa4.76□□□□□ -1.65
SHTN1-201ENST00000260777 KRTAP2-1Q9BYU5 128 aa4.76□□□□□ -1.65
SHTN1-201ENST00000260777 PRM1P04553 51 aa4.75□□□□□ -1.65
SHTN1-201ENST00000260777 EPPK1P58107 5090 aaKnown RBP4.73□□□□□ -1.65
SHTN1-201ENST00000260777 LCE2DQ5TA82 110 aaPredicted RBP4.7□□□□□ -1.66
SHTN1-201ENST00000260777 LCE2AQ5TA79 106 aaPredicted RBP4.7□□□□□ -1.66
SHTN1-201ENST00000260777 HMCN2Q8NDA2 5059 aa4.7□□□□□ -1.66
SHTN1-201ENST00000260777 FAT4Q6V0I7 4981 aa4.69□□□□□ -1.66
SHTN1-201ENST00000260777 RNF213Q63HN8 5207 aa4.67□□□□□ -1.66
SHTN1-201ENST00000260777 MT1AP04731 61 aa4.65□□□□□ -1.67
SHTN1-201ENST00000260777 UBR4Q5T4S7 5183 aa4.57□□□□□ -1.68
SHTN1-201ENST00000260777 MT4P47944 62 aa4.53□□□□□ -1.68
SHTN1-201ENST00000260777 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
SHTN1-201ENST00000260777 KRTAP9-2Q9BYQ4 174 aa4.49□□□□□ -1.69
SHTN1-201ENST00000260777 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
SHTN1-201ENST00000260777 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
SHTN1-201ENST00000260777 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
SHTN1-201ENST00000260777 LCE1BQ5T7P3 118 aa4.4□□□□□ -1.71
SHTN1-201ENST00000260777 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
SHTN1-201ENST00000260777 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
SHTN1-201ENST00000260777 LCE5AQ5TCM9 118 aa4.33□□□□□ -1.72
SHTN1-201ENST00000260777 FSIP2Q5CZC0 6907 aa4.3□□□□□ -1.72
SHTN1-201ENST00000260777 KRTAP9-4Q9BYQ2 154 aa4.28□□□□□ -1.72
SHTN1-201ENST00000260777 MUC2Q02817 5179 aa4.26□□□□□ -1.73
SHTN1-201ENST00000260777 KRTAP6-2Q3LI66 62 aa4.25□□□□□ -1.73
SHTN1-201ENST00000260777 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
SHTN1-201ENST00000260777 KRTAP9-6A0A140TA67 174 aa4.15□□□□□ -1.75
SHTN1-201ENST00000260777 SYNE2Q8WXH0 6885 aaKnown RBP4.14□□□□□ -1.75
SHTN1-201ENST00000260777 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
SHTN1-201ENST00000260777 KRTAP9-7A8MTY7 169 aa4.09□□□□□ -1.75
SHTN1-201ENST00000260777 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
SHTN1-201ENST00000260777 KRTAP20-1Q3LI63 56 aa4.01□□□□□ -1.77
SHTN1-201ENST00000260777 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.93□□□□□ -1.78
SHTN1-201ENST00000260777 USH2AO75445 5202 aa3.91□□□□□ -1.78
SHTN1-201ENST00000260777 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
SHTN1-201ENST00000260777 FCGBPQ9Y6R7 5405 aaPredicted RBP3.83□□□□□ -1.8
SHTN1-201ENST00000260777 KMT2DO14686 5537 aa3.76□□□□□ -1.81
SHTN1-201ENST00000260777 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
SHTN1-201ENST00000260777 SSPOA2VEC9 5147 aa3.63□□□□□ -1.83
SHTN1-201ENST00000260777 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
SHTN1-201ENST00000260777 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
SHTN1-201ENST00000260777 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
SHTN1-201ENST00000260777 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
SHTN1-201ENST00000260777 MACF1Q9UPN3 7388 aaKnown RBP3.53□□□□□ -1.84
SHTN1-201ENST00000260777 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
SHTN1-201ENST00000260777 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
SHTN1-201ENST00000260777 KRTAP4-6Q9BYQ5 205 aa3.47□□□□□ -1.85
SHTN1-201ENST00000260777 MUC12Q9UKN1 5478 aa3.45□□□□□ -1.86
SHTN1-201ENST00000260777 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
SHTN1-201ENST00000260777 NEBP20929 6669 aa3.39□□□□□ -1.87
SHTN1-201ENST00000260777 KRTAP9-9Q9BYP9 154 aa3.39□□□□□ -1.87
SHTN1-201ENST00000260777 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
SHTN1-201ENST00000260777 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
SHTN1-201ENST00000260777 MDN1Q9NU22 5596 aa3.18□□□□□ -1.9
SHTN1-201ENST00000260777 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.91
SHTN1-201ENST00000260777 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
SHTN1-201ENST00000260777 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
SHTN1-201ENST00000260777 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
SHTN1-201ENST00000260777 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
SHTN1-201ENST00000260777 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
SHTN1-201ENST00000260777 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
SHTN1-201ENST00000260777 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
SHTN1-201ENST00000260777 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
SHTN1-201ENST00000260777 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
SHTN1-201ENST00000260777 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
SHTN1-201ENST00000260777 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
SHTN1-201ENST00000260777 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
SHTN1-201ENST00000260777 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
SHTN1-201ENST00000260777 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
SHTN1-201ENST00000260777 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
SHTN1-201ENST00000260777 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
SHTN1-201ENST00000260777 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
SHTN1-201ENST00000260777 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
SHTN1-201ENST00000260777 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
SHTN1-201ENST00000260777 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 110.5 ms