RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SYNE2Q8WXH0 6885 aaKnown RBP7.9□□□□□ -1.14
SIX3-201ENST00000260653 SPRR2FQ96RM1 72 aa7.85□□□□□ -1.15
SIX3-201ENST00000260653 KRTAP9-6A0A140TA67 174 aa7.82□□□□□ -1.16
SIX3-201ENST00000260653 KRTAP4-7Q9BYR0 210 aa7.8□□□□□ -1.16
SIX3-201ENST00000260653 KRTAP19-4Q3LI73 84 aa7.73□□□□□ -1.17
SIX3-201ENST00000260653 KRTAP19-3Q7Z4W3 81 aa7.73□□□□□ -1.17
SIX3-201ENST00000260653 KRTAP5-9P26371 169 aa7.67□□□□□ -1.18
SIX3-201ENST00000260653 MT1GP13640 62 aa7.63□□□□□ -1.19
SIX3-201ENST00000260653 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.62□□□□□ -1.19
SIX3-201ENST00000260653 MT1MQ8N339 61 aa7.6□□□□□ -1.19
SIX3-201ENST00000260653 LCE5AQ5TCM9 118 aa7.58□□□□□ -1.2
SIX3-201ENST00000260653 MDN1Q9NU22 5596 aa7.58□□□□□ -1.2
SIX3-201ENST00000260653 KRTAP9-6A8MVA2 160 aa7.56□□□□□ -1.2
SIX3-201ENST00000260653 KRTAP4-3Q9BYR4 195 aa7.55□□□□□ -1.2
SIX3-201ENST00000260653 LCE1AQ5T7P2 110 aa7.47□□□□□ -1.21
SIX3-201ENST00000260653 KRTAP6-3Q3LI67 103 aa7.44□□□□□ -1.22
SIX3-201ENST00000260653 SPRR2EP22531 72 aa7.39□□□□□ -1.23
SIX3-201ENST00000260653 SPRR2BP35325 72 aa7.39□□□□□ -1.23
SIX3-201ENST00000260653 SPRR2AP35326 72 aa7.39□□□□□ -1.23
SIX3-201ENST00000260653 DSTQ03001 7570 aaKnown RBP7.37□□□□□ -1.23
SIX3-201ENST00000260653 LOC100996750A0A140TA64 210 aa7.32□□□□□ -1.24
SIX3-201ENST00000260653 KRTAP9-7A8MTY7 169 aa7.15□□□□□ -1.27
SIX3-201ENST00000260653 SPRR2DP22532 72 aa7.11□□□□□ -1.27
SIX3-201ENST00000260653 NEBP20929 6669 aa7.01□□□□□ -1.29
SIX3-201ENST00000260653 KRTAP2-3P0C7H8 128 aa6.96□□□□□ -1.29
SIX3-201ENST00000260653 KRTAP2-4Q9BYR9 128 aa6.96□□□□□ -1.29
SIX3-201ENST00000260653 KRTAP2-1Q9BYU5 128 aa6.96□□□□□ -1.29
SIX3-201ENST00000260653 KRTAP5-5Q701N2 237 aaPredicted RBP6.83□□□□□ -1.32
SIX3-201ENST00000260653 LCE3BQ5TA77 95 aa6.81□□□□□ -1.32
SIX3-201ENST00000260653 KRTAP6-1Q3LI64 71 aa6.72□□□□□ -1.33
SIX3-201ENST00000260653 MT1AP04731 61 aa6.71□□□□□ -1.34
SIX3-201ENST00000260653 KRTAP2-2Q9BYT5 123 aa6.61□□□□□ -1.35
SIX3-201ENST00000260653 SYNE1Q8NF91 8797 aaKnown RBP6.56□□□□□ -1.36
SIX3-201ENST00000260653 KRTAP5-4Q6L8H1 288 aa6.43□□□□□ -1.38
SIX3-201ENST00000260653 KRTAP9-4Q9BYQ2 154 aa6.37□□□□□ -1.39
SIX3-201ENST00000260653 KRTAP20-1Q3LI63 56 aa6.32□□□□□ -1.4
SIX3-201ENST00000260653 KRTAP12-4P60329 112 aa6.27□□□□□ -1.41
SIX3-201ENST00000260653 KRTAP4-9Q9BYQ8 210 aa6.27□□□□□ -1.41
SIX3-201ENST00000260653 LCE4AQ5TA78 99 aa6.24□□□□□ -1.41
SIX3-201ENST00000260653 MT4P47944 62 aa6.22□□□□□ -1.41
SIX3-201ENST00000260653 KRTAP4-6Q9BYQ5 205 aa6.19□□□□□ -1.42
SIX3-201ENST00000260653 KRTAP6-2Q3LI66 62 aa6.16□□□□□ -1.42
SIX3-201ENST00000260653 HMCN1Q96RW7 5635 aa6.06□□□□□ -1.44
SIX3-201ENST00000260653 MT3P25713 68 aa6.06□□□□□ -1.44
SIX3-201ENST00000260653 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
SIX3-201ENST00000260653 KRTAP20-2Q3LI61 65 aa6.04□□□□□ -1.44
SIX3-201ENST00000260653 LCE1EQ5T753 118 aa6.04□□□□□ -1.44
SIX3-201ENST00000260653 LCE3DQ9BYE3 92 aa5.95□□□□□ -1.46
SIX3-201ENST00000260653 OBSCNQ5VST9 7968 aa5.86□□□□□ -1.47
SIX3-201ENST00000260653 KRTAP5-2Q701N4 177 aa5.86□□□□□ -1.47
SIX3-201ENST00000260653 KRTAP5-3Q6L8H2 238 aa5.8□□□□□ -1.48
SIX3-201ENST00000260653 LCE3EQ5T5B0 92 aa5.79□□□□□ -1.48
SIX3-201ENST00000260653 LCE1FQ5T754 118 aa5.66□□□□□ -1.5
SIX3-201ENST00000260653 PRM1P04553 51 aa5.56□□□□□ -1.52
SIX3-201ENST00000260653 AHNAK2Q8IVF2 5795 aa5.25□□□□□ -1.57
SIX3-201ENST00000260653 KRTAP4-11Q9BYQ6 195 aa5.2□□□□□ -1.58
SIX3-201ENST00000260653 KRTAP5-1Q6L8H4 278 aa5.07□□□□□ -1.6
SIX3-201ENST00000260653 GPR98Q8WXG9 6306 aa5.05□□□□□ -1.6
SIX3-201ENST00000260653 KRTAP5-8O75690 187 aa5□□□□□ -1.61
SIX3-201ENST00000260653 MUC5ACP98088 5654 aa4.99□□□□□ -1.61
SIX3-201ENST00000260653 LCE1BQ5T7P3 118 aa4.98□□□□□ -1.61
SIX3-201ENST00000260653 KRTAP5-10Q6L8G5 202 aa4.95□□□□□ -1.62
SIX3-201ENST00000260653 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
SIX3-201ENST00000260653 LCE1CQ5T751 118 aa4.87□□□□□ -1.63
SIX3-201ENST00000260653 KRTAP5-7Q6L8G8 165 aa4.82□□□□□ -1.64
SIX3-201ENST00000260653 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
SIX3-201ENST00000260653 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
SIX3-201ENST00000260653 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.55□□□□□ -1.68
SIX3-201ENST00000260653 KRTAP21-2Q3LI59 83 aa4.38□□□□□ -1.71
SIX3-201ENST00000260653 MUC5BQ9HC84 5762 aaPredicted RBP4.38□□□□□ -1.71
SIX3-201ENST00000260653 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
SIX3-201ENST00000260653 MUC19Q7Z5P9 8384 aa4.15□□□□□ -1.74
SIX3-201ENST00000260653 KRTAP4-4Q9BYR3 166 aa3.96□□□□□ -1.78
SIX3-201ENST00000260653 AHNAKQ09666 5890 aaKnown RBP3.95□□□□□ -1.78
SIX3-201ENST00000260653 PHGR1C9JFL3 82 aa3.7□□□□□ -1.82
SIX3-201ENST00000260653 KRTAP21-1Q3LI58 79 aa3.67□□□□□ -1.82
SIX3-201ENST00000260653 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 7.1 ms