RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 EPPK1P58107 5090 aaKnown RBP2□□□□□ -2.09
TCN1-201ENST00000257264 TNP1P09430 55 aa1.96□□□□□ -2.1
TCN1-201ENST00000257264 KRTAP4-1Q9BYQ7 146 aa1.96□□□□□ -2.1
TCN1-201ENST00000257264 FLGP20930 4061 aaPredicted RBP1.95□□□□□ -2.1
TCN1-201ENST00000257264 KRTAP12-3P60328 96 aa1.95□□□□□ -2.1
TCN1-201ENST00000257264 HERC1Q15751 4861 aa1.95□□□□□ -2.1
TCN1-201ENST00000257264 BIRC6Q9NR09 4857 aa1.94□□□□□ -2.1
TCN1-201ENST00000257264 KRTAP19-2Q3LHN2 52 aa1.93□□□□□ -2.1
TCN1-201ENST00000257264 HERC2O95714 4834 aa1.93□□□□□ -2.1
TCN1-201ENST00000257264 KRTAP12-4P60329 112 aa1.9□□□□□ -2.1
TCN1-201ENST00000257264 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
TCN1-201ENST00000257264 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
TCN1-201ENST00000257264 KRTAP5-5Q701N2 237 aaPredicted RBP1.88□□□□□ -2.11
TCN1-201ENST00000257264 M0R2T5 61 aa1.87□□□□□ -2.11
TCN1-201ENST00000257264 SPRR2GQ9BYE4 73 aa1.86□□□□□ -2.11
TCN1-201ENST00000257264 HMCN2Q8NDA2 5059 aa1.84□□□□□ -2.11
TCN1-201ENST00000257264 MUC2Q02817 5179 aa1.81□□□□□ -2.12
TCN1-201ENST00000257264 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
TCN1-201ENST00000257264 PCLOQ9Y6V0 5065 aa1.8□□□□□ -2.12
TCN1-201ENST00000257264 MT1HP80294 61 aa1.79□□□□□ -2.12
TCN1-201ENST00000257264 MT2AP02795 61 aa1.77□□□□□ -2.13
TCN1-201ENST00000257264 KRTAP19-8Q3LI54 63 aa1.77□□□□□ -2.13
TCN1-201ENST00000257264 RNF213Q63HN8 5207 aa1.76□□□□□ -2.13
TCN1-201ENST00000257264 MT1FP04733 61 aa1.76□□□□□ -2.13
TCN1-201ENST00000257264 KRTAP8-1Q8IUC2 63 aa1.76□□□□□ -2.13
TCN1-201ENST00000257264 FAT4Q6V0I7 4981 aa1.73□□□□□ -2.13
TCN1-201ENST00000257264 UBR4Q5T4S7 5183 aa1.72□□□□□ -2.13
TCN1-201ENST00000257264 MT1BP07438 61 aa1.71□□□□□ -2.14
TCN1-201ENST00000257264 MT1XP80297 61 aa1.71□□□□□ -2.14
TCN1-201ENST00000257264 KRTAP19-5Q3LI72 72 aa1.61□□□□□ -2.15
TCN1-201ENST00000257264 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
TCN1-201ENST00000257264 KRTAP19-7Q3SYF9 63 aa1.51□□□□□ -2.17
TCN1-201ENST00000257264 USH2AO75445 5202 aa1.51□□□□□ -2.17
TCN1-201ENST00000257264 KRTAP2-3P0C7H8 128 aa1.51□□□□□ -2.17
TCN1-201ENST00000257264 KRTAP2-4Q9BYR9 128 aa1.51□□□□□ -2.17
TCN1-201ENST00000257264 KRTAP2-1Q9BYU5 128 aa1.51□□□□□ -2.17
TCN1-201ENST00000257264 MT1EP04732 61 aa1.49□□□□□ -2.17
TCN1-201ENST00000257264 MT1LQ93083 61 aa1.49□□□□□ -2.17
TCN1-201ENST00000257264 SSPOA2VEC9 5147 aa1.48□□□□□ -2.17
TCN1-201ENST00000257264 KMT2DO14686 5537 aa1.48□□□□□ -2.17
TCN1-201ENST00000257264 KRTAP5-7Q6L8G8 165 aa1.47□□□□□ -2.17
TCN1-201ENST00000257264 KRTAP19-6Q3LI70 58 aa1.45□□□□□ -2.18
TCN1-201ENST00000257264 MT1GP13640 62 aa1.42□□□□□ -2.18
TCN1-201ENST00000257264 KRTAP19-3Q7Z4W3 81 aa1.4□□□□□ -2.19
TCN1-201ENST00000257264 MT1MQ8N339 61 aa1.39□□□□□ -2.19
TCN1-201ENST00000257264 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
TCN1-201ENST00000257264 CRCT1Q9UGL9 99 aa1.35□□□□□ -2.19
TCN1-201ENST00000257264 SPRR2FQ96RM1 72 aa1.34□□□□□ -2.2
TCN1-201ENST00000257264 MT1AP04731 61 aa1.32□□□□□ -2.2
TCN1-201ENST00000257264 MUC12Q9UKN1 5478 aa1.32□□□□□ -2.2
TCN1-201ENST00000257264 FCGBPQ9Y6R7 5405 aaPredicted RBP1.31□□□□□ -2.2
TCN1-201ENST00000257264 FSIP2Q5CZC0 6907 aa1.3□□□□□ -2.2
TCN1-201ENST00000257264 MACF1Q9UPN3 7388 aaKnown RBP1.25□□□□□ -2.21
TCN1-201ENST00000257264 KRTAP6-1Q3LI64 71 aa1.25□□□□□ -2.21
TCN1-201ENST00000257264 DSTQ03001 7570 aaKnown RBP1.24□□□□□ -2.21
TCN1-201ENST00000257264 SPRR2EP22531 72 aa1.21□□□□□ -2.22
TCN1-201ENST00000257264 SPRR2BP35325 72 aa1.21□□□□□ -2.22
TCN1-201ENST00000257264 SPRR2AP35326 72 aa1.21□□□□□ -2.22
TCN1-201ENST00000257264 SYNE1Q8NF91 8797 aaKnown RBP1.2□□□□□ -2.22
TCN1-201ENST00000257264 MDN1Q9NU22 5596 aa1.2□□□□□ -2.22
TCN1-201ENST00000257264 SYNE2Q8WXH0 6885 aaKnown RBP1.19□□□□□ -2.22
TCN1-201ENST00000257264 PRM1P04553 51 aa1.18□□□□□ -2.22
TCN1-201ENST00000257264 SPRR2DP22532 72 aa1.17□□□□□ -2.22
TCN1-201ENST00000257264 KRTAP6-2Q3LI66 62 aa1.13□□□□□ -2.23
TCN1-201ENST00000257264 GPR98Q8WXG9 6306 aa1.05□□□□□ -2.24
TCN1-201ENST00000257264 NEBP20929 6669 aa1.01□□□□□ -2.25
TCN1-201ENST00000257264 MT4P47944 62 aa1□□□□□ -2.25
TCN1-201ENST00000257264 KRTAP20-2Q3LI61 65 aa1□□□□□ -2.25
TCN1-201ENST00000257264 KRTAP20-1Q3LI63 56 aa0.96□□□□□ -2.26
TCN1-201ENST00000257264 MUC5ACP98088 5654 aa0.95□□□□□ -2.26
TCN1-201ENST00000257264 KRTAP5-10Q6L8G5 202 aa0.89□□□□□ -2.27
TCN1-201ENST00000257264 MUC5BQ9HC84 5762 aaPredicted RBP0.83□□□□□ -2.28
TCN1-201ENST00000257264 AHNAK2Q8IVF2 5795 aa0.79□□□□□ -2.28
TCN1-201ENST00000257264 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
TCN1-201ENST00000257264 AHNAKQ09666 5890 aaKnown RBP0.76□□□□□ -2.29
TCN1-201ENST00000257264 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
TCN1-201ENST00000257264 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 340.8 ms