RNA–Protein interactions for RNA: ENST00000255674.11

RTTN-201, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 6,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-201ENST00000255674 MT3P25713 68 aa1.61□□□□□ -2.15
RTTN-201ENST00000255674 INE1O15225 51 aa1.6□□□□□ -2.15
RTTN-201ENST00000255674 LCE2BO14633 110 aa1.58□□□□□ -2.16
RTTN-201ENST00000255674 MACF1Q9UPN3 7388 aaKnown RBP1.57□□□□□ -2.16
RTTN-201ENST00000255674 SYNE2Q8WXH0 6885 aaKnown RBP1.57□□□□□ -2.16
RTTN-201ENST00000255674 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
RTTN-201ENST00000255674 KRTAP19-7Q3SYF9 63 aa1.57□□□□□ -2.16
RTTN-201ENST00000255674 SPRR2DP22532 72 aa1.56□□□□□ -2.16
RTTN-201ENST00000255674 FSIP2Q5CZC0 6907 aa1.56□□□□□ -2.16
RTTN-201ENST00000255674 KRTAP12-3P60328 96 aa1.54□□□□□ -2.16
RTTN-201ENST00000255674 MT2AP02795 61 aa1.53□□□□□ -2.16
RTTN-201ENST00000255674 KRTAP2-3P0C7H8 128 aa1.52□□□□□ -2.17
RTTN-201ENST00000255674 KRTAP5-5Q701N2 237 aaPredicted RBP1.52□□□□□ -2.17
RTTN-201ENST00000255674 KRTAP2-4Q9BYR9 128 aa1.52□□□□□ -2.17
RTTN-201ENST00000255674 KRTAP2-1Q9BYU5 128 aa1.52□□□□□ -2.17
RTTN-201ENST00000255674 KRTAP19-5Q3LI72 72 aa1.52□□□□□ -2.17
RTTN-201ENST00000255674 LCE3AQ5TA76 89 aa1.52□□□□□ -2.17
RTTN-201ENST00000255674 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
RTTN-201ENST00000255674 KRTAP4-1Q9BYQ7 146 aa1.51□□□□□ -2.17
RTTN-201ENST00000255674 MT1FP04733 61 aa1.5□□□□□ -2.17
RTTN-201ENST00000255674 FLGP20930 4061 aaPredicted RBP1.5□□□□□ -2.17
RTTN-201ENST00000255674 KRTAP5-2Q701N4 177 aa1.5□□□□□ -2.17
RTTN-201ENST00000255674 MT4P47944 62 aa1.48□□□□□ -2.17
RTTN-201ENST00000255674 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
RTTN-201ENST00000255674 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.46□□□□□ -2.18
RTTN-201ENST00000255674 MT1XP80297 61 aa1.45□□□□□ -2.18
RTTN-201ENST00000255674 LCE5AQ5TCM9 118 aa1.44□□□□□ -2.18
RTTN-201ENST00000255674 KRTAP12-4P60329 112 aa1.44□□□□□ -2.18
RTTN-201ENST00000255674 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
RTTN-201ENST00000255674 MT1EP04732 61 aa1.43□□□□□ -2.18
RTTN-201ENST00000255674 KRTAP9-9Q9BYP9 154 aa1.42□□□□□ -2.18
RTTN-201ENST00000255674 KRTAP9-4Q9BYQ2 154 aa1.42□□□□□ -2.18
RTTN-201ENST00000255674 MT1HP80294 61 aa1.39□□□□□ -2.19
RTTN-201ENST00000255674 MT1LQ93083 61 aa1.39□□□□□ -2.19
RTTN-201ENST00000255674 LCE1BQ5T7P3 118 aa1.39□□□□□ -2.19
RTTN-201ENST00000255674 KRTAP9-2Q9BYQ4 174 aa1.38□□□□□ -2.19
RTTN-201ENST00000255674 LCE1EQ5T753 118 aa1.37□□□□□ -2.19
RTTN-201ENST00000255674 KRTAP20-1Q3LI63 56 aa1.35□□□□□ -2.19
RTTN-201ENST00000255674 LCE1CQ5T751 118 aa1.35□□□□□ -2.19
RTTN-201ENST00000255674 LCE1FQ5T754 118 aa1.35□□□□□ -2.19
RTTN-201ENST00000255674 KRTAP9-6A0A140TA67 174 aa1.35□□□□□ -2.19
RTTN-201ENST00000255674 LCE1DQ5T752 114 aa1.34□□□□□ -2.19
RTTN-201ENST00000255674 MT1GP13640 62 aa1.34□□□□□ -2.2
RTTN-201ENST00000255674 KRTAP6-3Q3LI67 103 aa1.34□□□□□ -2.2
RTTN-201ENST00000255674 LCE3EQ5T5B0 92 aa1.33□□□□□ -2.2
RTTN-201ENST00000255674 LCE3CQ5T5A8 94 aa1.31□□□□□ -2.2
RTTN-201ENST00000255674 KRTAP5-1Q6L8H4 278 aa1.3□□□□□ -2.2
RTTN-201ENST00000255674 MT1AP04731 61 aa1.29□□□□□ -2.2
RTTN-201ENST00000255674 KRTAP5-3Q6L8H2 238 aa1.29□□□□□ -2.2
RTTN-201ENST00000255674 KRTAP9-6A8MVA2 160 aa1.27□□□□□ -2.21
RTTN-201ENST00000255674 LCE3DQ9BYE3 92 aa1.27□□□□□ -2.21
RTTN-201ENST00000255674 KRTAP4-7Q9BYR0 210 aa1.27□□□□□ -2.21
RTTN-201ENST00000255674 KRTAP9-7A8MTY7 169 aa1.26□□□□□ -2.21
RTTN-201ENST00000255674 MT1MQ8N339 61 aa1.25□□□□□ -2.21
RTTN-201ENST00000255674 KRTAP4-9Q9BYQ8 210 aa1.24□□□□□ -2.21
RTTN-201ENST00000255674 LOC100996750A0A140TA64 210 aa1.21□□□□□ -2.22
RTTN-201ENST00000255674 KRTAP4-6Q9BYQ5 205 aa1.21□□□□□ -2.22
RTTN-201ENST00000255674 LCE4AQ5TA78 99 aa1.2□□□□□ -2.22
RTTN-201ENST00000255674 KRTAP19-3Q7Z4W3 81 aa1.2□□□□□ -2.22
RTTN-201ENST00000255674 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.2□□□□□ -2.22
RTTN-201ENST00000255674 KRTAP4-8Q9BYQ9 185 aa1.2□□□□□ -2.22
RTTN-201ENST00000255674 KRTAP4-8A0A0G2JLE6 195 aa1.18□□□□□ -2.22
RTTN-201ENST00000255674 KRTAP2-2Q9BYT5 123 aa1.17□□□□□ -2.22
RTTN-201ENST00000255674 KRTAP4-2Q9BYR5 136 aa1.15□□□□□ -2.22
RTTN-201ENST00000255674 KRTAP5-11Q6L8G4 156 aa1.14□□□□□ -2.23
RTTN-201ENST00000255674 KRTAP4-12Q9BQ66 201 aa1.13□□□□□ -2.23
RTTN-201ENST00000255674 PRM1P04553 51 aa1.12□□□□□ -2.23
RTTN-201ENST00000255674 KRTAP20-2Q3LI61 65 aa1.08□□□□□ -2.24
RTTN-201ENST00000255674 KRTAP4-11Q9BYQ6 195 aa1.07□□□□□ -2.24
RTTN-201ENST00000255674 KRTAP4-3Q9BYR4 195 aa1.05□□□□□ -2.24
RTTN-201ENST00000255674 KRTAP6-2Q3LI66 62 aa0.98□□□□□ -2.25
RTTN-201ENST00000255674 KRTAP4-4Q9BYR3 166 aa0.94□□□□□ -2.26
RTTN-201ENST00000255674 KRTAP21-2Q3LI59 83 aa0.92□□□□□ -2.26
RTTN-201ENST00000255674 KRTAP6-1Q3LI64 71 aa0.9□□□□□ -2.26
RTTN-201ENST00000255674 PHGR1C9JFL3 82 aa0.84□□□□□ -2.28
RTTN-201ENST00000255674 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
RTTN-201ENST00000255674 MUC16Q8WXI7 14507 aa0.42□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 103.5 ms