RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 KRTAP9-6A0A140TA67 174 aa6.65□□□□□ -1.34
TRIM47-201ENST00000254816 LCE3CQ5T5A8 94 aa6.65□□□□□ -1.34
TRIM47-201ENST00000254816 KRTAP4-7Q9BYR0 210 aa6.61□□□□□ -1.35
TRIM47-201ENST00000254816 KRTAP19-3Q7Z4W3 81 aa6.53□□□□□ -1.36
TRIM47-201ENST00000254816 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.51□□□□□ -1.37
TRIM47-201ENST00000254816 KRTAP5-9P26371 169 aa6.49□□□□□ -1.37
TRIM47-201ENST00000254816 KRTAP19-4Q3LI73 84 aa6.46□□□□□ -1.38
TRIM47-201ENST00000254816 MT1GP13640 62 aa6.45□□□□□ -1.38
TRIM47-201ENST00000254816 MT1MQ8N339 61 aa6.43□□□□□ -1.38
TRIM47-201ENST00000254816 KRTAP9-6A8MVA2 160 aa6.42□□□□□ -1.38
TRIM47-201ENST00000254816 MDN1Q9NU22 5596 aa6.42□□□□□ -1.38
TRIM47-201ENST00000254816 KRTAP4-3Q9BYR4 195 aa6.41□□□□□ -1.38
TRIM47-201ENST00000254816 LCE5AQ5TCM9 118 aa6.4□□□□□ -1.38
TRIM47-201ENST00000254816 LCE1AQ5T7P2 110 aa6.34□□□□□ -1.39
TRIM47-201ENST00000254816 KRTAP6-3Q3LI67 103 aa6.33□□□□□ -1.4
TRIM47-201ENST00000254816 SPRR2EP22531 72 aa6.29□□□□□ -1.4
TRIM47-201ENST00000254816 SPRR2BP35325 72 aa6.29□□□□□ -1.4
TRIM47-201ENST00000254816 SPRR2AP35326 72 aa6.29□□□□□ -1.4
TRIM47-201ENST00000254816 DSTQ03001 7570 aaKnown RBP6.23□□□□□ -1.41
TRIM47-201ENST00000254816 LOC100996750A0A140TA64 210 aa6.21□□□□□ -1.42
TRIM47-201ENST00000254816 INE1O15225 51 aa6.19□□□□□ -1.42
TRIM47-201ENST00000254816 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
TRIM47-201ENST00000254816 KRTAP2-3P0C7H8 128 aa6.06□□□□□ -1.44
TRIM47-201ENST00000254816 KRTAP2-4Q9BYR9 128 aa6.06□□□□□ -1.44
TRIM47-201ENST00000254816 KRTAP2-1Q9BYU5 128 aa6.06□□□□□ -1.44
TRIM47-201ENST00000254816 SPRR2DP22532 72 aa6.05□□□□□ -1.44
TRIM47-201ENST00000254816 NEBP20929 6669 aa5.94□□□□□ -1.46
TRIM47-201ENST00000254816 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
TRIM47-201ENST00000254816 KRTAP5-5Q701N2 237 aaPredicted RBP5.76□□□□□ -1.49
TRIM47-201ENST00000254816 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
TRIM47-201ENST00000254816 MT1AP04731 61 aa5.66□□□□□ -1.5
TRIM47-201ENST00000254816 SYNE1Q8NF91 8797 aaKnown RBP5.57□□□□□ -1.52
TRIM47-201ENST00000254816 KRTAP5-4Q6L8H1 288 aa5.44□□□□□ -1.54
TRIM47-201ENST00000254816 KRTAP20-1Q3LI63 56 aa5.41□□□□□ -1.54
TRIM47-201ENST00000254816 KRTAP2-2Q9BYT5 123 aa5.41□□□□□ -1.54
TRIM47-201ENST00000254816 KRTAP9-4Q9BYQ2 154 aa5.39□□□□□ -1.55
TRIM47-201ENST00000254816 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
TRIM47-201ENST00000254816 KRTAP12-4P60329 112 aa5.34□□□□□ -1.56
TRIM47-201ENST00000254816 MT4P47944 62 aa5.31□□□□□ -1.56
TRIM47-201ENST00000254816 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
TRIM47-201ENST00000254816 KRTAP4-6Q9BYQ5 205 aa5.28□□□□□ -1.56
TRIM47-201ENST00000254816 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
TRIM47-201ENST00000254816 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
TRIM47-201ENST00000254816 KRTAP20-2Q3LI61 65 aa5.12□□□□□ -1.59
TRIM47-201ENST00000254816 MT3P25713 68 aa5.12□□□□□ -1.59
TRIM47-201ENST00000254816 HMCN1Q96RW7 5635 aa5.11□□□□□ -1.59
TRIM47-201ENST00000254816 LCE3DQ9BYE3 92 aa5.08□□□□□ -1.6
TRIM47-201ENST00000254816 LCE3EQ5T5B0 92 aa4.98□□□□□ -1.61
TRIM47-201ENST00000254816 KRTAP5-2Q701N4 177 aa4.94□□□□□ -1.62
TRIM47-201ENST00000254816 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
TRIM47-201ENST00000254816 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
TRIM47-201ENST00000254816 PRM1P04553 51 aa4.71□□□□□ -1.65
TRIM47-201ENST00000254816 AHNAK2Q8IVF2 5795 aa4.46□□□□□ -1.69
TRIM47-201ENST00000254816 KRTAP4-11Q9BYQ6 195 aa4.41□□□□□ -1.7
TRIM47-201ENST00000254816 LCE1EQ5T753 118 aa4.37□□□□□ -1.71
TRIM47-201ENST00000254816 KRTAP5-1Q6L8H4 278 aa4.3□□□□□ -1.72
TRIM47-201ENST00000254816 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
TRIM47-201ENST00000254816 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
TRIM47-201ENST00000254816 MUC5ACP98088 5654 aa4.22□□□□□ -1.73
TRIM47-201ENST00000254816 GPR98Q8WXG9 6306 aa4.2□□□□□ -1.74
TRIM47-201ENST00000254816 KRTAP5-10Q6L8G5 202 aa4.2□□□□□ -1.74
TRIM47-201ENST00000254816 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.74
TRIM47-201ENST00000254816 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
TRIM47-201ENST00000254816 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
TRIM47-201ENST00000254816 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
TRIM47-201ENST00000254816 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
TRIM47-201ENST00000254816 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.82
TRIM47-201ENST00000254816 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
TRIM47-201ENST00000254816 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
TRIM47-201ENST00000254816 KRTAP4-12Q9BQ66 201 aa3.52□□□□□ -1.85
TRIM47-201ENST00000254816 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
TRIM47-201ENST00000254816 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
TRIM47-201ENST00000254816 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
TRIM47-201ENST00000254816 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
TRIM47-201ENST00000254816 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
TRIM47-201ENST00000254816 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
TRIM47-201ENST00000254816 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 13.2 ms