RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 KRTAP19-6Q3LI70 58 aa6.15□□□□□ -1.42
PPFIA1-201ENST00000253925 LCE3DQ9BYE3 92 aa6.11□□□□□ -1.43
PPFIA1-201ENST00000253925 MT1MQ8N339 61 aa6.1□□□□□ -1.43
PPFIA1-201ENST00000253925 LCE3EQ5T5B0 92 aa6.05□□□□□ -1.44
PPFIA1-201ENST00000253925 SPRR2DP22532 72 aa6□□□□□ -1.45
PPFIA1-201ENST00000253925 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.46
PPFIA1-201ENST00000253925 KRTAP2-3P0C7H8 128 aa5.96□□□□□ -1.46
PPFIA1-201ENST00000253925 KRTAP2-4Q9BYR9 128 aa5.96□□□□□ -1.46
PPFIA1-201ENST00000253925 KRTAP2-1Q9BYU5 128 aa5.96□□□□□ -1.46
PPFIA1-201ENST00000253925 KRTAP4-3Q9BYR4 195 aa5.94□□□□□ -1.46
PPFIA1-201ENST00000253925 FSIP2Q5CZC0 6907 aa5.86□□□□□ -1.47
PPFIA1-201ENST00000253925 PRM1P04553 51 aa5.85□□□□□ -1.47
PPFIA1-201ENST00000253925 KRTAP9-6A8MVA2 160 aa5.83□□□□□ -1.48
PPFIA1-201ENST00000253925 SYNE1Q8NF91 8797 aaKnown RBP5.83□□□□□ -1.48
PPFIA1-201ENST00000253925 LCE2DQ5TA82 110 aaPredicted RBP5.73□□□□□ -1.49
PPFIA1-201ENST00000253925 MT1AP04731 61 aa5.64□□□□□ -1.51
PPFIA1-201ENST00000253925 MT3P25713 68 aa5.64□□□□□ -1.51
PPFIA1-201ENST00000253925 KRTAP9-2Q9BYQ4 174 aa5.54□□□□□ -1.52
PPFIA1-201ENST00000253925 KRTAP4-9Q9BYQ8 210 aa5.51□□□□□ -1.53
PPFIA1-201ENST00000253925 LCE5AQ5TCM9 118 aa5.49□□□□□ -1.53
PPFIA1-201ENST00000253925 USH2AO75445 5202 aa5.47□□□□□ -1.53
PPFIA1-201ENST00000253925 KRTAP6-1Q3LI64 71 aa5.38□□□□□ -1.55
PPFIA1-201ENST00000253925 LCE1AQ5T7P2 110 aa5.34□□□□□ -1.55
PPFIA1-201ENST00000253925 KMT2DO14686 5537 aa5.34□□□□□ -1.55
PPFIA1-201ENST00000253925 OBSCNQ5VST9 7968 aa5.33□□□□□ -1.56
PPFIA1-201ENST00000253925 FCGBPQ9Y6R7 5405 aaPredicted RBP5.31□□□□□ -1.56
PPFIA1-201ENST00000253925 MT4P47944 62 aa5.29□□□□□ -1.56
PPFIA1-201ENST00000253925 SYNE2Q8WXH0 6885 aaKnown RBP5.27□□□□□ -1.57
PPFIA1-201ENST00000253925 KRTAP9-4Q9BYQ2 154 aa5.19□□□□□ -1.58
PPFIA1-201ENST00000253925 DSTQ03001 7570 aaKnown RBP5.18□□□□□ -1.58
PPFIA1-201ENST00000253925 KRTAP9-7A8MTY7 169 aa5.16□□□□□ -1.58
PPFIA1-201ENST00000253925 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
PPFIA1-201ENST00000253925 KRTAP6-3Q3LI67 103 aa5.09□□□□□ -1.59
PPFIA1-201ENST00000253925 LCE1DQ5T752 114 aa5.08□□□□□ -1.6
PPFIA1-201ENST00000253925 LCE1BQ5T7P3 118 aa5.03□□□□□ -1.6
PPFIA1-201ENST00000253925 KRTAP9-6A0A140TA67 174 aa5.01□□□□□ -1.61
PPFIA1-201ENST00000253925 SSPOA2VEC9 5147 aa4.97□□□□□ -1.61
PPFIA1-201ENST00000253925 MUC12Q9UKN1 5478 aa4.96□□□□□ -1.62
PPFIA1-201ENST00000253925 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.89□□□□□ -1.63
PPFIA1-201ENST00000253925 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
PPFIA1-201ENST00000253925 MACF1Q9UPN3 7388 aaKnown RBP4.83□□□□□ -1.64
PPFIA1-201ENST00000253925 KRTAP5-9P26371 169 aa4.81□□□□□ -1.64
PPFIA1-201ENST00000253925 KRTAP2-2Q9BYT5 123 aa4.73□□□□□ -1.65
PPFIA1-201ENST00000253925 KRTAP20-1Q3LI63 56 aa4.66□□□□□ -1.66
PPFIA1-201ENST00000253925 MDN1Q9NU22 5596 aa4.4□□□□□ -1.7
PPFIA1-201ENST00000253925 KRTAP5-5Q701N2 237 aaPredicted RBP4.4□□□□□ -1.71
PPFIA1-201ENST00000253925 KRTAP4-6Q9BYQ5 205 aa4.36□□□□□ -1.71
PPFIA1-201ENST00000253925 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
PPFIA1-201ENST00000253925 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
PPFIA1-201ENST00000253925 NEBP20929 6669 aa4.28□□□□□ -1.72
PPFIA1-201ENST00000253925 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
PPFIA1-201ENST00000253925 MUC19Q7Z5P9 8384 aa4.13□□□□□ -1.75
PPFIA1-201ENST00000253925 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
PPFIA1-201ENST00000253925 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
PPFIA1-201ENST00000253925 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
PPFIA1-201ENST00000253925 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.79
PPFIA1-201ENST00000253925 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
PPFIA1-201ENST00000253925 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
PPFIA1-201ENST00000253925 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
PPFIA1-201ENST00000253925 KRTAP4-12Q9BQ66 201 aa3.52□□□□□ -1.85
PPFIA1-201ENST00000253925 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
PPFIA1-201ENST00000253925 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
PPFIA1-201ENST00000253925 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
PPFIA1-201ENST00000253925 HMCN1Q96RW7 5635 aa3.49□□□□□ -1.85
PPFIA1-201ENST00000253925 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
PPFIA1-201ENST00000253925 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
PPFIA1-201ENST00000253925 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
PPFIA1-201ENST00000253925 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
PPFIA1-201ENST00000253925 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
PPFIA1-201ENST00000253925 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
PPFIA1-201ENST00000253925 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
PPFIA1-201ENST00000253925 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
PPFIA1-201ENST00000253925 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
PPFIA1-201ENST00000253925 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
PPFIA1-201ENST00000253925 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
PPFIA1-201ENST00000253925 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
PPFIA1-201ENST00000253925 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms