RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 KRTAP12-4P60329 112 aa5.81□□□□□ -1.48
NDFIP1-201ENST00000253814 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
NDFIP1-201ENST00000253814 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
NDFIP1-201ENST00000253814 LCE3BQ5TA77 95 aa5.76□□□□□ -1.49
NDFIP1-201ENST00000253814 KRTAP19-4Q3LI73 84 aa5.73□□□□□ -1.49
NDFIP1-201ENST00000253814 LCE2AQ5TA79 106 aaPredicted RBP5.65□□□□□ -1.51
NDFIP1-201ENST00000253814 KRTAP2-3P0C7H8 128 aa5.64□□□□□ -1.51
NDFIP1-201ENST00000253814 KRTAP2-4Q9BYR9 128 aa5.64□□□□□ -1.51
NDFIP1-201ENST00000253814 KRTAP2-1Q9BYU5 128 aa5.64□□□□□ -1.51
NDFIP1-201ENST00000253814 KRTAP19-3Q7Z4W3 81 aa5.56□□□□□ -1.52
NDFIP1-201ENST00000253814 MUC12Q9UKN1 5478 aa5.54□□□□□ -1.52
NDFIP1-201ENST00000253814 MT1MQ8N339 61 aa5.51□□□□□ -1.53
NDFIP1-201ENST00000253814 SYNE2Q8WXH0 6885 aaKnown RBP5.43□□□□□ -1.54
NDFIP1-201ENST00000253814 KRTAP4-9Q9BYQ8 210 aa5.42□□□□□ -1.54
NDFIP1-201ENST00000253814 KRTAP19-6Q3LI70 58 aa5.39□□□□□ -1.55
NDFIP1-201ENST00000253814 LCE3DQ9BYE3 92 aa5.35□□□□□ -1.55
NDFIP1-201ENST00000253814 SSPOA2VEC9 5147 aa5.35□□□□□ -1.55
NDFIP1-201ENST00000253814 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
NDFIP1-201ENST00000253814 LCE2DQ5TA82 110 aaPredicted RBP5.25□□□□□ -1.57
NDFIP1-201ENST00000253814 SPRR2EP22531 72 aa5.21□□□□□ -1.58
NDFIP1-201ENST00000253814 SPRR2BP35325 72 aa5.21□□□□□ -1.58
NDFIP1-201ENST00000253814 SPRR2AP35326 72 aa5.21□□□□□ -1.58
NDFIP1-201ENST00000253814 PRM1P04553 51 aa5.14□□□□□ -1.59
NDFIP1-201ENST00000253814 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
NDFIP1-201ENST00000253814 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
NDFIP1-201ENST00000253814 MACF1Q9UPN3 7388 aaKnown RBP5.01□□□□□ -1.61
NDFIP1-201ENST00000253814 SPRR2DP22532 72 aa4.97□□□□□ -1.61
NDFIP1-201ENST00000253814 MT1AP04731 61 aa4.96□□□□□ -1.62
NDFIP1-201ENST00000253814 KRTAP9-7A8MTY7 169 aa4.95□□□□□ -1.62
NDFIP1-201ENST00000253814 KRTAP9-2Q9BYQ4 174 aa4.88□□□□□ -1.63
NDFIP1-201ENST00000253814 MT3P25713 68 aa4.76□□□□□ -1.65
NDFIP1-201ENST00000253814 MDN1Q9NU22 5596 aa4.76□□□□□ -1.65
NDFIP1-201ENST00000253814 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
NDFIP1-201ENST00000253814 LCE1AQ5T7P2 110 aa4.73□□□□□ -1.65
NDFIP1-201ENST00000253814 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
NDFIP1-201ENST00000253814 MT4P47944 62 aa4.59□□□□□ -1.67
NDFIP1-201ENST00000253814 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
NDFIP1-201ENST00000253814 LCE1DQ5T752 114 aa4.4□□□□□ -1.7
NDFIP1-201ENST00000253814 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
NDFIP1-201ENST00000253814 KRTAP6-3Q3LI67 103 aa4.29□□□□□ -1.72
NDFIP1-201ENST00000253814 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
NDFIP1-201ENST00000253814 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
NDFIP1-201ENST00000253814 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.17□□□□□ -1.74
NDFIP1-201ENST00000253814 MUC19Q7Z5P9 8384 aa4.17□□□□□ -1.74
NDFIP1-201ENST00000253814 KRTAP9-6A0A140TA67 174 aa4.15□□□□□ -1.75
NDFIP1-201ENST00000253814 KRTAP4-6Q9BYQ5 205 aa4.11□□□□□ -1.75
NDFIP1-201ENST00000253814 KRTAP4-11Q9BYQ6 195 aa3.92□□□□□ -1.78
NDFIP1-201ENST00000253814 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
NDFIP1-201ENST00000253814 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
NDFIP1-201ENST00000253814 NEBP20929 6669 aa3.82□□□□□ -1.8
NDFIP1-201ENST00000253814 MUC5ACP98088 5654 aa3.75□□□□□ -1.81
NDFIP1-201ENST00000253814 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
NDFIP1-201ENST00000253814 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
NDFIP1-201ENST00000253814 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
NDFIP1-201ENST00000253814 KRTAP20-1Q3LI63 56 aa3.59□□□□□ -1.84
NDFIP1-201ENST00000253814 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
NDFIP1-201ENST00000253814 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
NDFIP1-201ENST00000253814 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
NDFIP1-201ENST00000253814 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.88
NDFIP1-201ENST00000253814 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
NDFIP1-201ENST00000253814 KRTAP4-2Q9BYR5 136 aa3.25□□□□□ -1.89
NDFIP1-201ENST00000253814 KRTAP5-3Q6L8H2 238 aa3.24□□□□□ -1.89
NDFIP1-201ENST00000253814 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
NDFIP1-201ENST00000253814 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
NDFIP1-201ENST00000253814 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
NDFIP1-201ENST00000253814 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
NDFIP1-201ENST00000253814 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
NDFIP1-201ENST00000253814 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
NDFIP1-201ENST00000253814 KRTAP9-9Q9BYP9 154 aa2.94□□□□□ -1.94
NDFIP1-201ENST00000253814 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
NDFIP1-201ENST00000253814 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
NDFIP1-201ENST00000253814 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
NDFIP1-201ENST00000253814 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
NDFIP1-201ENST00000253814 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
NDFIP1-201ENST00000253814 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
NDFIP1-201ENST00000253814 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
NDFIP1-201ENST00000253814 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 105.9 ms