RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 SPRR2FQ96RM1 72 aa4.42□□□□□ -1.7
COLGALT1-201ENST00000252599 KRTAP2-3P0C7H8 128 aa4.42□□□□□ -1.7
COLGALT1-201ENST00000252599 KRTAP2-4Q9BYR9 128 aa4.42□□□□□ -1.7
COLGALT1-201ENST00000252599 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
COLGALT1-201ENST00000252599 MUC12Q9UKN1 5478 aa4.41□□□□□ -1.7
COLGALT1-201ENST00000252599 SYNE2Q8WXH0 6885 aaKnown RBP4.39□□□□□ -1.71
COLGALT1-201ENST00000252599 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
COLGALT1-201ENST00000252599 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
COLGALT1-201ENST00000252599 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
COLGALT1-201ENST00000252599 MT1GP13640 62 aa4.29□□□□□ -1.72
COLGALT1-201ENST00000252599 KRTAP6-3Q3LI67 103 aa4.29□□□□□ -1.72
COLGALT1-201ENST00000252599 SSPOA2VEC9 5147 aa4.28□□□□□ -1.72
COLGALT1-201ENST00000252599 LOC100996750A0A140TA64 210 aa4.24□□□□□ -1.73
COLGALT1-201ENST00000252599 LCE3BQ5TA77 95 aa4.23□□□□□ -1.73
COLGALT1-201ENST00000252599 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
COLGALT1-201ENST00000252599 KRTAP9-6A0A140TA67 174 aa4.22□□□□□ -1.73
COLGALT1-201ENST00000252599 KRTAP19-7Q3SYF9 63 aa4.22□□□□□ -1.73
COLGALT1-201ENST00000252599 MT1LQ93083 61 aa4.18□□□□□ -1.74
COLGALT1-201ENST00000252599 KRTAP9-7A8MTY7 169 aa4.16□□□□□ -1.74
COLGALT1-201ENST00000252599 MT1EP04732 61 aa4.15□□□□□ -1.75
COLGALT1-201ENST00000252599 MACF1Q9UPN3 7388 aaKnown RBP4.14□□□□□ -1.75
COLGALT1-201ENST00000252599 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
COLGALT1-201ENST00000252599 LCE1FQ5T754 118 aa4.12□□□□□ -1.75
COLGALT1-201ENST00000252599 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
COLGALT1-201ENST00000252599 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
COLGALT1-201ENST00000252599 LCE2DQ5TA82 110 aaPredicted RBP4.05□□□□□ -1.76
COLGALT1-201ENST00000252599 KRTAP19-6Q3LI70 58 aa4□□□□□ -1.77
COLGALT1-201ENST00000252599 SPRR2EP22531 72 aa3.99□□□□□ -1.77
COLGALT1-201ENST00000252599 SPRR2BP35325 72 aa3.99□□□□□ -1.77
COLGALT1-201ENST00000252599 SPRR2AP35326 72 aa3.99□□□□□ -1.77
COLGALT1-201ENST00000252599 KRTAP19-3Q7Z4W3 81 aa3.99□□□□□ -1.77
COLGALT1-201ENST00000252599 KRTAP9-2Q9BYQ4 174 aa3.97□□□□□ -1.77
COLGALT1-201ENST00000252599 MT1MQ8N339 61 aa3.94□□□□□ -1.78
COLGALT1-201ENST00000252599 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
COLGALT1-201ENST00000252599 LCE5AQ5TCM9 118 aa3.89□□□□□ -1.79
COLGALT1-201ENST00000252599 SPRR2DP22532 72 aa3.79□□□□□ -1.8
COLGALT1-201ENST00000252599 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
COLGALT1-201ENST00000252599 KRTAP19-4Q3LI73 84 aa3.75□□□□□ -1.81
COLGALT1-201ENST00000252599 KRTAP6-1Q3LI64 71 aa3.64□□□□□ -1.83
COLGALT1-201ENST00000252599 MT4P47944 62 aa3.61□□□□□ -1.83
COLGALT1-201ENST00000252599 MT3P25713 68 aa3.59□□□□□ -1.83
COLGALT1-201ENST00000252599 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.84
COLGALT1-201ENST00000252599 KRTAP9-4Q9BYQ2 154 aa3.49□□□□□ -1.85
COLGALT1-201ENST00000252599 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.46□□□□□ -1.86
COLGALT1-201ENST00000252599 MT1AP04731 61 aa3.46□□□□□ -1.86
COLGALT1-201ENST00000252599 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
COLGALT1-201ENST00000252599 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
COLGALT1-201ENST00000252599 NEBP20929 6669 aa3.23□□□□□ -1.89
COLGALT1-201ENST00000252599 KRTAP5-9P26371 169 aa3.23□□□□□ -1.89
COLGALT1-201ENST00000252599 KRTAP4-6Q9BYQ5 205 aa3.21□□□□□ -1.9
COLGALT1-201ENST00000252599 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
COLGALT1-201ENST00000252599 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
COLGALT1-201ENST00000252599 KRTAP20-1Q3LI63 56 aa3.02□□□□□ -1.93
COLGALT1-201ENST00000252599 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
COLGALT1-201ENST00000252599 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
COLGALT1-201ENST00000252599 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
COLGALT1-201ENST00000252599 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
COLGALT1-201ENST00000252599 GPR98Q8WXG9 6306 aa2.82□□□□□ -1.96
COLGALT1-201ENST00000252599 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
COLGALT1-201ENST00000252599 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.98
COLGALT1-201ENST00000252599 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
COLGALT1-201ENST00000252599 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -2
COLGALT1-201ENST00000252599 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -2
COLGALT1-201ENST00000252599 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
COLGALT1-201ENST00000252599 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
COLGALT1-201ENST00000252599 KRTAP5-3Q6L8H2 238 aa2.43□□□□□ -2.02
COLGALT1-201ENST00000252599 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
COLGALT1-201ENST00000252599 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
COLGALT1-201ENST00000252599 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
COLGALT1-201ENST00000252599 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
COLGALT1-201ENST00000252599 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
COLGALT1-201ENST00000252599 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
COLGALT1-201ENST00000252599 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
COLGALT1-201ENST00000252599 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
COLGALT1-201ENST00000252599 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
COLGALT1-201ENST00000252599 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
COLGALT1-201ENST00000252599 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 76.3 ms