RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 SSPOA2VEC9 5147 aa1.66□□□□□ -2.14
UBE4A-201ENST00000252108 KRTAP9-2Q9BYQ4 174 aa1.61□□□□□ -2.15
UBE4A-201ENST00000252108 KRTAP5-3Q6L8H2 238 aa1.6□□□□□ -2.15
UBE4A-201ENST00000252108 KRTAP9-6A0A140TA67 174 aa1.57□□□□□ -2.16
UBE4A-201ENST00000252108 KMT2DO14686 5537 aa1.56□□□□□ -2.16
UBE4A-201ENST00000252108 KRTAP12-4P60329 112 aa1.55□□□□□ -2.16
UBE4A-201ENST00000252108 LCE3CQ5T5A8 94 aa1.55□□□□□ -2.16
UBE4A-201ENST00000252108 KRTAP5-4Q6L8H1 288 aa1.55□□□□□ -2.16
UBE4A-201ENST00000252108 KRTAP9-9Q9BYP9 154 aa1.55□□□□□ -2.16
UBE4A-201ENST00000252108 KRTAP9-4Q9BYQ2 154 aa1.55□□□□□ -2.16
UBE4A-201ENST00000252108 KRTAP20-1Q3LI63 56 aa1.54□□□□□ -2.16
UBE4A-201ENST00000252108 KRTAP19-7Q3SYF9 63 aa1.54□□□□□ -2.16
UBE4A-201ENST00000252108 KRTAP4-8A0A0G2JLE6 195 aa1.53□□□□□ -2.16
UBE4A-201ENST00000252108 KRTAP9-6A8MVA2 160 aa1.52□□□□□ -2.17
UBE4A-201ENST00000252108 KRTAP19-5Q3LI72 72 aa1.5□□□□□ -2.17
UBE4A-201ENST00000252108 KRTAP5-9P26371 169 aa1.49□□□□□ -2.17
UBE4A-201ENST00000252108 KRTAP19-6Q3LI70 58 aa1.48□□□□□ -2.17
UBE4A-201ENST00000252108 MT4P47944 62 aa1.48□□□□□ -2.17
UBE4A-201ENST00000252108 KRTAP4-7Q9BYR0 210 aa1.47□□□□□ -2.17
UBE4A-201ENST00000252108 KRTAP2-3P0C7H8 128 aa1.46□□□□□ -2.18
UBE4A-201ENST00000252108 KRTAP2-4Q9BYR9 128 aa1.46□□□□□ -2.18
UBE4A-201ENST00000252108 KRTAP2-1Q9BYU5 128 aa1.46□□□□□ -2.18
UBE4A-201ENST00000252108 FCGBPQ9Y6R7 5405 aaPredicted RBP1.45□□□□□ -2.18
UBE4A-201ENST00000252108 MT1EP04732 61 aa1.45□□□□□ -2.18
UBE4A-201ENST00000252108 KRTAP9-7A8MTY7 169 aa1.44□□□□□ -2.18
UBE4A-201ENST00000252108 MT1LQ93083 61 aa1.44□□□□□ -2.18
UBE4A-201ENST00000252108 LCE3BQ5TA77 95 aa1.43□□□□□ -2.18
UBE4A-201ENST00000252108 MUC12Q9UKN1 5478 aa1.38□□□□□ -2.19
UBE4A-201ENST00000252108 KRTAP4-9Q9BYQ8 210 aa1.37□□□□□ -2.19
UBE4A-201ENST00000252108 MT1GP13640 62 aa1.36□□□□□ -2.19
UBE4A-201ENST00000252108 LCE1BQ5T7P3 118 aa1.36□□□□□ -2.19
UBE4A-201ENST00000252108 LCE5AQ5TCM9 118 aa1.36□□□□□ -2.19
UBE4A-201ENST00000252108 KRTAP5-5Q701N2 237 aaPredicted RBP1.34□□□□□ -2.19
UBE4A-201ENST00000252108 LCE1CQ5T751 118 aa1.33□□□□□ -2.2
UBE4A-201ENST00000252108 LCE1EQ5T753 118 aa1.33□□□□□ -2.2
UBE4A-201ENST00000252108 LCE1FQ5T754 118 aa1.33□□□□□ -2.2
UBE4A-201ENST00000252108 LCE1AQ5T7P2 110 aa1.33□□□□□ -2.2
UBE4A-201ENST00000252108 LCE1DQ5T752 114 aa1.33□□□□□ -2.2
UBE4A-201ENST00000252108 MT1MQ8N339 61 aa1.33□□□□□ -2.2
UBE4A-201ENST00000252108 KRTAP19-3Q7Z4W3 81 aa1.32□□□□□ -2.2
UBE4A-201ENST00000252108 MDN1Q9NU22 5596 aa1.31□□□□□ -2.2
UBE4A-201ENST00000252108 KRTAP4-3Q9BYR4 195 aa1.31□□□□□ -2.2
UBE4A-201ENST00000252108 LCE3EQ5T5B0 92 aa1.3□□□□□ -2.2
UBE4A-201ENST00000252108 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
UBE4A-201ENST00000252108 MT1AP04731 61 aa1.28□□□□□ -2.2
UBE4A-201ENST00000252108 MUC5BQ9HC84 5762 aaPredicted RBP1.28□□□□□ -2.2
UBE4A-201ENST00000252108 KRTAP2-2Q9BYT5 123 aa1.27□□□□□ -2.21
UBE4A-201ENST00000252108 LCE3DQ9BYE3 92 aa1.27□□□□□ -2.21
UBE4A-201ENST00000252108 FSIP2Q5CZC0 6907 aa1.26□□□□□ -2.21
UBE4A-201ENST00000252108 KRTAP6-3Q3LI67 103 aa1.24□□□□□ -2.21
UBE4A-201ENST00000252108 SYNE2Q8WXH0 6885 aaKnown RBP1.24□□□□□ -2.21
UBE4A-201ENST00000252108 KRTAP5-8O75690 187 aa1.24□□□□□ -2.21
UBE4A-201ENST00000252108 LCE4AQ5TA78 99 aa1.23□□□□□ -2.21
UBE4A-201ENST00000252108 GPR98Q8WXG9 6306 aa1.21□□□□□ -2.22
UBE4A-201ENST00000252108 PRM1P04553 51 aa1.2□□□□□ -2.22
UBE4A-201ENST00000252108 KRTAP6-1Q3LI64 71 aa1.2□□□□□ -2.22
UBE4A-201ENST00000252108 KRTAP4-11Q9BYQ6 195 aa1.19□□□□□ -2.22
UBE4A-201ENST00000252108 DSTQ03001 7570 aaKnown RBP1.17□□□□□ -2.22
UBE4A-201ENST00000252108 KRTAP4-4Q9BYR3 166 aa1.17□□□□□ -2.22
UBE4A-201ENST00000252108 NEBP20929 6669 aa1.11□□□□□ -2.23
UBE4A-201ENST00000252108 SYNE1Q8NF91 8797 aaKnown RBP1.11□□□□□ -2.23
UBE4A-201ENST00000252108 KRTAP6-2Q3LI66 62 aa1.09□□□□□ -2.24
UBE4A-201ENST00000252108 KRTAP5-1Q6L8H4 278 aa1.07□□□□□ -2.24
UBE4A-201ENST00000252108 KRTAP5-11Q6L8G4 156 aa1.07□□□□□ -2.24
UBE4A-201ENST00000252108 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
UBE4A-201ENST00000252108 AHNAKQ09666 5890 aaKnown RBP1.04□□□□□ -2.24
UBE4A-201ENST00000252108 HMCN1Q96RW7 5635 aa1.04□□□□□ -2.24
UBE4A-201ENST00000252108 KRTAP20-2Q3LI61 65 aa1.02□□□□□ -2.25
UBE4A-201ENST00000252108 KRTAP5-10Q6L8G5 202 aa0.99□□□□□ -2.25
UBE4A-201ENST00000252108 MUC5ACP98088 5654 aa0.98□□□□□ -2.25
UBE4A-201ENST00000252108 KRTAP5-7Q6L8G8 165 aa0.94□□□□□ -2.26
UBE4A-201ENST00000252108 OBSCNQ5VST9 7968 aa0.89□□□□□ -2.27
UBE4A-201ENST00000252108 PHGR1C9JFL3 82 aa0.88□□□□□ -2.27
UBE4A-201ENST00000252108 KRTAP21-2Q3LI59 83 aa0.86□□□□□ -2.27
UBE4A-201ENST00000252108 MUC19Q7Z5P9 8384 aa0.77□□□□□ -2.29
UBE4A-201ENST00000252108 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
UBE4A-201ENST00000252108 MUC16Q8WXI7 14507 aa0.48□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms