RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 NDUFAF8A1L188 74 aa6□□□□□ -1.45
PCCB-201ENST00000251654 KRTAP9-6A0A140TA67 174 aa5.99□□□□□ -1.45
PCCB-201ENST00000251654 KRTAP4-7Q9BYR0 210 aa5.99□□□□□ -1.45
PCCB-201ENST00000251654 KRTAP19-3Q7Z4W3 81 aa5.97□□□□□ -1.45
PCCB-201ENST00000251654 KRTAP5-9P26371 169 aa5.96□□□□□ -1.46
PCCB-201ENST00000251654 MT1GP13640 62 aa5.91□□□□□ -1.46
PCCB-201ENST00000251654 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.88□□□□□ -1.47
PCCB-201ENST00000251654 LCE5AQ5TCM9 118 aa5.88□□□□□ -1.47
PCCB-201ENST00000251654 MT1MQ8N339 61 aa5.88□□□□□ -1.47
PCCB-201ENST00000251654 KRTAP9-6A8MVA2 160 aa5.85□□□□□ -1.47
PCCB-201ENST00000251654 MDN1Q9NU22 5596 aa5.84□□□□□ -1.47
PCCB-201ENST00000251654 KRTAP4-3Q9BYR4 195 aa5.8□□□□□ -1.48
PCCB-201ENST00000251654 LCE1AQ5T7P2 110 aa5.78□□□□□ -1.48
PCCB-201ENST00000251654 KRTAP6-3Q3LI67 103 aa5.76□□□□□ -1.49
PCCB-201ENST00000251654 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
PCCB-201ENST00000251654 SPRR2EP22531 72 aa5.68□□□□□ -1.5
PCCB-201ENST00000251654 SPRR2BP35325 72 aa5.68□□□□□ -1.5
PCCB-201ENST00000251654 SPRR2AP35326 72 aa5.68□□□□□ -1.5
PCCB-201ENST00000251654 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
PCCB-201ENST00000251654 A0A0A0MQY5 61 aa5.57□□□□□ -1.52
PCCB-201ENST00000251654 KRTAP9-7A8MTY7 169 aa5.51□□□□□ -1.53
PCCB-201ENST00000251654 SPRR2DP22532 72 aa5.47□□□□□ -1.53
PCCB-201ENST00000251654 KRTAP2-3P0C7H8 128 aa5.41□□□□□ -1.54
PCCB-201ENST00000251654 KRTAP2-4Q9BYR9 128 aa5.41□□□□□ -1.54
PCCB-201ENST00000251654 KRTAP2-1Q9BYU5 128 aa5.41□□□□□ -1.54
PCCB-201ENST00000251654 NEBP20929 6669 aa5.41□□□□□ -1.54
PCCB-201ENST00000251654 KRTAP5-5Q701N2 237 aaPredicted RBP5.32□□□□□ -1.56
PCCB-201ENST00000251654 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
PCCB-201ENST00000251654 MT1AP04731 61 aa5.19□□□□□ -1.58
PCCB-201ENST00000251654 KRTAP6-1Q3LI64 71 aa5.18□□□□□ -1.58
PCCB-201ENST00000251654 KRTAP4-6Q9BYQ5 205 aa5.11□□□□□ -1.59
PCCB-201ENST00000251654 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
PCCB-201ENST00000251654 KRTAP5-4Q6L8H1 288 aa5.01□□□□□ -1.61
PCCB-201ENST00000251654 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
PCCB-201ENST00000251654 INE1O15225 51 aa4.9□□□□□ -1.63
PCCB-201ENST00000251654 KRTAP2-2Q9BYT5 123 aa4.9□□□□□ -1.63
PCCB-201ENST00000251654 KRTAP20-1Q3LI63 56 aa4.87□□□□□ -1.63
PCCB-201ENST00000251654 KRTAP12-4P60329 112 aa4.84□□□□□ -1.63
PCCB-201ENST00000251654 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
PCCB-201ENST00000251654 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
PCCB-201ENST00000251654 MT4P47944 62 aa4.76□□□□□ -1.65
PCCB-201ENST00000251654 KRTAP6-2Q3LI66 62 aa4.75□□□□□ -1.65
PCCB-201ENST00000251654 HMCN1Q96RW7 5635 aa4.71□□□□□ -1.66
PCCB-201ENST00000251654 MT3P25713 68 aa4.68□□□□□ -1.66
PCCB-201ENST00000251654 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
PCCB-201ENST00000251654 LCE1DQ5T752 114 aa4.67□□□□□ -1.66
PCCB-201ENST00000251654 LCE3DQ9BYE3 92 aa4.6□□□□□ -1.67
PCCB-201ENST00000251654 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
PCCB-201ENST00000251654 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
PCCB-201ENST00000251654 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
PCCB-201ENST00000251654 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
PCCB-201ENST00000251654 KRTAP4-12Q9BQ66 201 aa4.41□□□□□ -1.7
PCCB-201ENST00000251654 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
PCCB-201ENST00000251654 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
PCCB-201ENST00000251654 AHNAK2Q8IVF2 5795 aa4.06□□□□□ -1.76
PCCB-201ENST00000251654 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
PCCB-201ENST00000251654 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
PCCB-201ENST00000251654 PRM1P04553 51 aa3.97□□□□□ -1.77
PCCB-201ENST00000251654 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
PCCB-201ENST00000251654 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
PCCB-201ENST00000251654 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
PCCB-201ENST00000251654 KRTAP5-10Q6L8G5 202 aa3.86□□□□□ -1.79
PCCB-201ENST00000251654 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
PCCB-201ENST00000251654 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
PCCB-201ENST00000251654 KRTAP5-7Q6L8G8 165 aa3.77□□□□□ -1.81
PCCB-201ENST00000251654 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
PCCB-201ENST00000251654 GPR98Q8WXG9 6306 aa3.56□□□□□ -1.84
PCCB-201ENST00000251654 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.86
PCCB-201ENST00000251654 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
PCCB-201ENST00000251654 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
PCCB-201ENST00000251654 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
PCCB-201ENST00000251654 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
PCCB-201ENST00000251654 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
PCCB-201ENST00000251654 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
PCCB-201ENST00000251654 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
PCCB-201ENST00000251654 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
PCCB-201ENST00000251654 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 543.4 ms