RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 MT1EP04732 61 aa5.92□□□□□ -1.46
FOXA1-201ENST00000250448 KRTAP2-3P0C7H8 128 aa5.86□□□□□ -1.47
FOXA1-201ENST00000250448 KRTAP2-4Q9BYR9 128 aa5.86□□□□□ -1.47
FOXA1-201ENST00000250448 KRTAP2-1Q9BYU5 128 aa5.86□□□□□ -1.47
FOXA1-201ENST00000250448 KRTAP4-7Q9BYR0 210 aa5.85□□□□□ -1.47
FOXA1-201ENST00000250448 MT1LQ93083 61 aa5.83□□□□□ -1.48
FOXA1-201ENST00000250448 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
FOXA1-201ENST00000250448 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
FOXA1-201ENST00000250448 KRTAP9-6A0A140TA67 174 aa5.77□□□□□ -1.49
FOXA1-201ENST00000250448 MDN1Q9NU22 5596 aa5.7□□□□□ -1.5
FOXA1-201ENST00000250448 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
FOXA1-201ENST00000250448 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.65□□□□□ -1.5
FOXA1-201ENST00000250448 KRTAP4-3Q9BYR4 195 aa5.65□□□□□ -1.5
FOXA1-201ENST00000250448 DSTQ03001 7570 aaKnown RBP5.6□□□□□ -1.51
FOXA1-201ENST00000250448 KRTAP5-9P26371 169 aa5.59□□□□□ -1.51
FOXA1-201ENST00000250448 MT1MQ8N339 61 aa5.58□□□□□ -1.52
FOXA1-201ENST00000250448 MT1GP13640 62 aa5.57□□□□□ -1.52
FOXA1-201ENST00000250448 LCE5AQ5TCM9 118 aa5.55□□□□□ -1.52
FOXA1-201ENST00000250448 LCE1AQ5T7P2 110 aa5.51□□□□□ -1.53
FOXA1-201ENST00000250448 SPRR2EP22531 72 aa5.48□□□□□ -1.53
FOXA1-201ENST00000250448 SPRR2BP35325 72 aa5.48□□□□□ -1.53
FOXA1-201ENST00000250448 SPRR2AP35326 72 aa5.48□□□□□ -1.53
FOXA1-201ENST00000250448 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
FOXA1-201ENST00000250448 KRTAP6-3Q3LI67 103 aa5.45□□□□□ -1.54
FOXA1-201ENST00000250448 KRTAP9-7A8MTY7 169 aa5.32□□□□□ -1.56
FOXA1-201ENST00000250448 SPRR2DP22532 72 aa5.26□□□□□ -1.57
FOXA1-201ENST00000250448 KRTAP2-2Q9BYT5 123 aa5.25□□□□□ -1.57
FOXA1-201ENST00000250448 KRTAP12-4P60329 112 aa5.21□□□□□ -1.58
FOXA1-201ENST00000250448 NEBP20929 6669 aa5.17□□□□□ -1.58
FOXA1-201ENST00000250448 LCE3BQ5TA77 95 aa5.05□□□□□ -1.6
FOXA1-201ENST00000250448 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
FOXA1-201ENST00000250448 SYNE1Q8NF91 8797 aaKnown RBP4.98□□□□□ -1.61
FOXA1-201ENST00000250448 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
FOXA1-201ENST00000250448 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.62
FOXA1-201ENST00000250448 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.62
FOXA1-201ENST00000250448 MT1AP04731 61 aa4.93□□□□□ -1.62
FOXA1-201ENST00000250448 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
FOXA1-201ENST00000250448 LCE1DQ5T752 114 aa4.78□□□□□ -1.64
FOXA1-201ENST00000250448 LCE3EQ5T5B0 92 aa4.77□□□□□ -1.65
FOXA1-201ENST00000250448 KRTAP20-1Q3LI63 56 aa4.68□□□□□ -1.66
FOXA1-201ENST00000250448 KRTAP5-4Q6L8H1 288 aa4.68□□□□□ -1.66
FOXA1-201ENST00000250448 MT4P47944 62 aa4.67□□□□□ -1.66
FOXA1-201ENST00000250448 PRM1P04553 51 aa4.65□□□□□ -1.66
FOXA1-201ENST00000250448 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.66
FOXA1-201ENST00000250448 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
FOXA1-201ENST00000250448 KRTAP4-6Q9BYQ5 205 aa4.63□□□□□ -1.67
FOXA1-201ENST00000250448 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
FOXA1-201ENST00000250448 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
FOXA1-201ENST00000250448 HMCN1Q96RW7 5635 aa4.53□□□□□ -1.68
FOXA1-201ENST00000250448 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
FOXA1-201ENST00000250448 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
FOXA1-201ENST00000250448 MT3P25713 68 aa4.42□□□□□ -1.7
FOXA1-201ENST00000250448 KRTAP5-2Q701N4 177 aa4.25□□□□□ -1.73
FOXA1-201ENST00000250448 KRTAP5-3Q6L8H2 238 aa4.24□□□□□ -1.73
FOXA1-201ENST00000250448 AHNAK2Q8IVF2 5795 aa3.91□□□□□ -1.78
FOXA1-201ENST00000250448 MUC19Q7Z5P9 8384 aa3.89□□□□□ -1.79
FOXA1-201ENST00000250448 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.8
FOXA1-201ENST00000250448 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
FOXA1-201ENST00000250448 KRTAP5-1Q6L8H4 278 aa3.73□□□□□ -1.81
FOXA1-201ENST00000250448 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
FOXA1-201ENST00000250448 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
FOXA1-201ENST00000250448 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
FOXA1-201ENST00000250448 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
FOXA1-201ENST00000250448 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
FOXA1-201ENST00000250448 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
FOXA1-201ENST00000250448 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
FOXA1-201ENST00000250448 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.85
FOXA1-201ENST00000250448 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
FOXA1-201ENST00000250448 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
FOXA1-201ENST00000250448 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
FOXA1-201ENST00000250448 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
FOXA1-201ENST00000250448 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
FOXA1-201ENST00000250448 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
FOXA1-201ENST00000250448 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
FOXA1-201ENST00000250448 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
FOXA1-201ENST00000250448 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
FOXA1-201ENST00000250448 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 119.2 ms