RNA–Protein interactions for RNA: ENST00000249364.8

CALU-201, Transcript of calumenin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALU, Length 3,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-201ENST00000249364 KRTAP19-3Q7Z4W3 81 aa4.25□□□□□ -1.73
CALU-201ENST00000249364 MT1GP13640 62 aa4.23□□□□□ -1.73
CALU-201ENST00000249364 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
CALU-201ENST00000249364 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
CALU-201ENST00000249364 MUC12Q9UKN1 5478 aa4.19□□□□□ -1.74
CALU-201ENST00000249364 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
CALU-201ENST00000249364 LCE5AQ5TCM9 118 aa4.18□□□□□ -1.74
CALU-201ENST00000249364 SPRR2EP22531 72 aa4.16□□□□□ -1.74
CALU-201ENST00000249364 SPRR2BP35325 72 aa4.16□□□□□ -1.74
CALU-201ENST00000249364 SPRR2AP35326 72 aa4.16□□□□□ -1.74
CALU-201ENST00000249364 MT1MQ8N339 61 aa4.14□□□□□ -1.75
CALU-201ENST00000249364 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
CALU-201ENST00000249364 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.75
CALU-201ENST00000249364 MDN1Q9NU22 5596 aa4.07□□□□□ -1.76
CALU-201ENST00000249364 SPRR2DP22532 72 aa4.02□□□□□ -1.77
CALU-201ENST00000249364 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
CALU-201ENST00000249364 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
CALU-201ENST00000249364 NEBP20929 6669 aa3.94□□□□□ -1.78
CALU-201ENST00000249364 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
CALU-201ENST00000249364 LCE3BQ5TA77 95 aa3.87□□□□□ -1.79
CALU-201ENST00000249364 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
CALU-201ENST00000249364 LOC100996750A0A140TA64 210 aa3.85□□□□□ -1.79
CALU-201ENST00000249364 KRTAP2-3P0C7H8 128 aa3.81□□□□□ -1.8
CALU-201ENST00000249364 KRTAP2-4Q9BYR9 128 aa3.81□□□□□ -1.8
CALU-201ENST00000249364 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
CALU-201ENST00000249364 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
CALU-201ENST00000249364 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
CALU-201ENST00000249364 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
CALU-201ENST00000249364 KRTAP2-1Q9BYU5 128 aa3.72□□□□□ -1.81
CALU-201ENST00000249364 MT1AP04731 61 aa3.67□□□□□ -1.82
CALU-201ENST00000249364 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
CALU-201ENST00000249364 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
CALU-201ENST00000249364 LCE4AQ5TA78 99 aa3.61□□□□□ -1.83
CALU-201ENST00000249364 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
CALU-201ENST00000249364 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
CALU-201ENST00000249364 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
CALU-201ENST00000249364 KRTAP9-4Q9BYQ2 154 aa3.48□□□□□ -1.85
CALU-201ENST00000249364 MT4P47944 62 aa3.46□□□□□ -1.86
CALU-201ENST00000249364 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
CALU-201ENST00000249364 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
CALU-201ENST00000249364 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
CALU-201ENST00000249364 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
CALU-201ENST00000249364 MT3P25713 68 aa3.34□□□□□ -1.87
CALU-201ENST00000249364 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
CALU-201ENST00000249364 HMCN1Q96RW7 5635 aa3.31□□□□□ -1.88
CALU-201ENST00000249364 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.89
CALU-201ENST00000249364 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
CALU-201ENST00000249364 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
CALU-201ENST00000249364 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
CALU-201ENST00000249364 INE1O15225 51 aa3.16□□□□□ -1.9
CALU-201ENST00000249364 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.9
CALU-201ENST00000249364 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
CALU-201ENST00000249364 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
CALU-201ENST00000249364 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
CALU-201ENST00000249364 KRTAP4-11Q9BYQ6 195 aa2.96□□□□□ -1.94
CALU-201ENST00000249364 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
CALU-201ENST00000249364 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.94
CALU-201ENST00000249364 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
CALU-201ENST00000249364 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
CALU-201ENST00000249364 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
CALU-201ENST00000249364 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
CALU-201ENST00000249364 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
CALU-201ENST00000249364 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
CALU-201ENST00000249364 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
CALU-201ENST00000249364 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
CALU-201ENST00000249364 PRM1P04553 51 aa2.6□□□□□ -1.99
CALU-201ENST00000249364 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
CALU-201ENST00000249364 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
CALU-201ENST00000249364 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
CALU-201ENST00000249364 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.02
CALU-201ENST00000249364 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
CALU-201ENST00000249364 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
CALU-201ENST00000249364 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
CALU-201ENST00000249364 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
CALU-201ENST00000249364 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
CALU-201ENST00000249364 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
CALU-201ENST00000249364 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 50.5 ms