RNA–Protein interactions for RNA: ENST00000240100.6

DUSP4-201, Transcript of dual specificity phosphatase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP4, Length 5,537 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP4-201ENST00000240100 MT1MQ8N339 61 aa5.41□□□□□ -1.54
DUSP4-201ENST00000240100 KRTAP9-6A0A140TA67 174 aa5.27□□□□□ -1.57
DUSP4-201ENST00000240100 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
DUSP4-201ENST00000240100 LOC100996750A0A140TA64 210 aa5.25□□□□□ -1.57
DUSP4-201ENST00000240100 FAT4Q6V0I7 4981 aa5.23□□□□□ -1.57
DUSP4-201ENST00000240100 RNF213Q63HN8 5207 aa5.22□□□□□ -1.57
DUSP4-201ENST00000240100 KRTAP2-3P0C7H8 128 aa5.2□□□□□ -1.58
DUSP4-201ENST00000240100 KRTAP2-4Q9BYR9 128 aa5.2□□□□□ -1.58
DUSP4-201ENST00000240100 KRTAP2-1Q9BYU5 128 aa5.2□□□□□ -1.58
DUSP4-201ENST00000240100 MT3P25713 68 aa5.19□□□□□ -1.58
DUSP4-201ENST00000240100 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
DUSP4-201ENST00000240100 HMCN2Q8NDA2 5059 aa5.13□□□□□ -1.59
DUSP4-201ENST00000240100 PRM1P04553 51 aa5.12□□□□□ -1.59
DUSP4-201ENST00000240100 MT1AP04731 61 aa5.07□□□□□ -1.6
DUSP4-201ENST00000240100 UBR4Q5T4S7 5183 aa5.05□□□□□ -1.6
DUSP4-201ENST00000240100 MT4P47944 62 aa4.99□□□□□ -1.61
DUSP4-201ENST00000240100 KRTAP6-3Q3LI67 103 aa4.95□□□□□ -1.62
DUSP4-201ENST00000240100 KRTAP9-7A8MTY7 169 aa4.92□□□□□ -1.62
DUSP4-201ENST00000240100 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
DUSP4-201ENST00000240100 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
DUSP4-201ENST00000240100 KRTAP20-1Q3LI63 56 aa4.89□□□□□ -1.63
DUSP4-201ENST00000240100 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
DUSP4-201ENST00000240100 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.64
DUSP4-201ENST00000240100 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
DUSP4-201ENST00000240100 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
DUSP4-201ENST00000240100 FSIP2Q5CZC0 6907 aa4.74□□□□□ -1.65
DUSP4-201ENST00000240100 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
DUSP4-201ENST00000240100 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
DUSP4-201ENST00000240100 LCE1BQ5T7P3 118 aa4.71□□□□□ -1.66
DUSP4-201ENST00000240100 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
DUSP4-201ENST00000240100 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
DUSP4-201ENST00000240100 MUC2Q02817 5179 aa4.62□□□□□ -1.67
DUSP4-201ENST00000240100 KRTAP6-2Q3LI66 62 aa4.6□□□□□ -1.67
DUSP4-201ENST00000240100 KRTAP2-2Q9BYT5 123 aa4.59□□□□□ -1.67
DUSP4-201ENST00000240100 SYNE2Q8WXH0 6885 aaKnown RBP4.58□□□□□ -1.68
DUSP4-201ENST00000240100 USH2AO75445 5202 aa4.35□□□□□ -1.71
DUSP4-201ENST00000240100 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
DUSP4-201ENST00000240100 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
DUSP4-201ENST00000240100 SSPOA2VEC9 5147 aa4.13□□□□□ -1.75
DUSP4-201ENST00000240100 NEBP20929 6669 aa4.07□□□□□ -1.76
DUSP4-201ENST00000240100 KMT2DO14686 5537 aa4.03□□□□□ -1.76
DUSP4-201ENST00000240100 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
DUSP4-201ENST00000240100 FCGBPQ9Y6R7 5405 aaPredicted RBP4.01□□□□□ -1.77
DUSP4-201ENST00000240100 LCE1CQ5T751 118 aa3.91□□□□□ -1.78
DUSP4-201ENST00000240100 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
DUSP4-201ENST00000240100 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
DUSP4-201ENST00000240100 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.78
DUSP4-201ENST00000240100 KRTAP20-2Q3LI61 65 aa3.86□□□□□ -1.79
DUSP4-201ENST00000240100 KRTAP4-6Q9BYQ5 205 aa3.84□□□□□ -1.79
DUSP4-201ENST00000240100 DSTQ03001 7570 aaKnown RBP3.81□□□□□ -1.8
DUSP4-201ENST00000240100 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
DUSP4-201ENST00000240100 KRTAP4-11Q9BYQ6 195 aa3.74□□□□□ -1.81
DUSP4-201ENST00000240100 GPR98Q8WXG9 6306 aa3.74□□□□□ -1.81
DUSP4-201ENST00000240100 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
DUSP4-201ENST00000240100 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
DUSP4-201ENST00000240100 MDN1Q9NU22 5596 aa3.58□□□□□ -1.84
DUSP4-201ENST00000240100 MUC19Q7Z5P9 8384 aa3.52□□□□□ -1.85
DUSP4-201ENST00000240100 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
DUSP4-201ENST00000240100 KRTAP5-3Q6L8H2 238 aa3.23□□□□□ -1.89
DUSP4-201ENST00000240100 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
DUSP4-201ENST00000240100 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
DUSP4-201ENST00000240100 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
DUSP4-201ENST00000240100 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
DUSP4-201ENST00000240100 KRTAP5-10Q6L8G5 202 aa2.96□□□□□ -1.94
DUSP4-201ENST00000240100 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
DUSP4-201ENST00000240100 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
DUSP4-201ENST00000240100 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
DUSP4-201ENST00000240100 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
DUSP4-201ENST00000240100 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
DUSP4-201ENST00000240100 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
DUSP4-201ENST00000240100 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
DUSP4-201ENST00000240100 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
DUSP4-201ENST00000240100 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
DUSP4-201ENST00000240100 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.44□□□□□ -2.02
DUSP4-201ENST00000240100 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.02
DUSP4-201ENST00000240100 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
DUSP4-201ENST00000240100 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms