RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 UBR4Q5T4S7 5183 aa2.99□□□□□ -1.93
NUDCD1-201ENST00000239690 KRTAP19-7Q3SYF9 63 aa2.98□□□□□ -1.93
NUDCD1-201ENST00000239690 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
NUDCD1-201ENST00000239690 FAT4Q6V0I7 4981 aa2.94□□□□□ -1.94
NUDCD1-201ENST00000239690 LOC100996750A0A140TA64 210 aa2.93□□□□□ -1.94
NUDCD1-201ENST00000239690 PRM1P04553 51 aa2.92□□□□□ -1.94
NUDCD1-201ENST00000239690 MT1MQ8N339 61 aa2.91□□□□□ -1.94
NUDCD1-201ENST00000239690 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
NUDCD1-201ENST00000239690 FSIP2Q5CZC0 6907 aa2.84□□□□□ -1.95
NUDCD1-201ENST00000239690 LCE2AQ5TA79 106 aaPredicted RBP2.84□□□□□ -1.96
NUDCD1-201ENST00000239690 KRTAP4-9Q9BYQ8 210 aa2.79□□□□□ -1.96
NUDCD1-201ENST00000239690 KRTAP4-6Q9BYQ5 205 aa2.79□□□□□ -1.96
NUDCD1-201ENST00000239690 SPRR2EP22531 72 aa2.75□□□□□ -1.97
NUDCD1-201ENST00000239690 SPRR2BP35325 72 aa2.75□□□□□ -1.97
NUDCD1-201ENST00000239690 SPRR2AP35326 72 aa2.75□□□□□ -1.97
NUDCD1-201ENST00000239690 KRTAP19-6Q3LI70 58 aa2.73□□□□□ -1.97
NUDCD1-201ENST00000239690 MT1AP04731 61 aa2.73□□□□□ -1.97
NUDCD1-201ENST00000239690 MT3P25713 68 aa2.69□□□□□ -1.98
NUDCD1-201ENST00000239690 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
NUDCD1-201ENST00000239690 FCGBPQ9Y6R7 5405 aaPredicted RBP2.66□□□□□ -1.98
NUDCD1-201ENST00000239690 KRTAP9-2Q9BYQ4 174 aa2.66□□□□□ -1.98
NUDCD1-201ENST00000239690 KRTAP9-7A8MTY7 169 aa2.65□□□□□ -1.99
NUDCD1-201ENST00000239690 SPRR2DP22532 72 aa2.64□□□□□ -1.99
NUDCD1-201ENST00000239690 KMT2DO14686 5537 aa2.62□□□□□ -1.99
NUDCD1-201ENST00000239690 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
NUDCD1-201ENST00000239690 KRTAP6-1Q3LI64 71 aa2.62□□□□□ -1.99
NUDCD1-201ENST00000239690 USH2AO75445 5202 aa2.59□□□□□ -1.99
NUDCD1-201ENST00000239690 DSTQ03001 7570 aaKnown RBP2.58□□□□□ -2
NUDCD1-201ENST00000239690 KRTAP9-6A0A140TA67 174 aa2.57□□□□□ -2
NUDCD1-201ENST00000239690 LCE5AQ5TCM9 118 aa2.56□□□□□ -2
NUDCD1-201ENST00000239690 MACF1Q9UPN3 7388 aaKnown RBP2.49□□□□□ -2.01
NUDCD1-201ENST00000239690 SYNE2Q8WXH0 6885 aaKnown RBP2.47□□□□□ -2.01
NUDCD1-201ENST00000239690 KRTAP9-4Q9BYQ2 154 aa2.47□□□□□ -2.01
NUDCD1-201ENST00000239690 KRTAP2-2Q9BYT5 123 aa2.46□□□□□ -2.02
NUDCD1-201ENST00000239690 SSPOA2VEC9 5147 aa2.45□□□□□ -2.02
NUDCD1-201ENST00000239690 LCE1DQ5T752 114 aa2.39□□□□□ -2.03
NUDCD1-201ENST00000239690 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
NUDCD1-201ENST00000239690 MUC12Q9UKN1 5478 aa2.38□□□□□ -2.03
NUDCD1-201ENST00000239690 MT4P47944 62 aa2.35□□□□□ -2.03
NUDCD1-201ENST00000239690 LCE1AQ5T7P2 110 aa2.35□□□□□ -2.03
NUDCD1-201ENST00000239690 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.04
NUDCD1-201ENST00000239690 KRTAP6-3Q3LI67 103 aa2.31□□□□□ -2.04
NUDCD1-201ENST00000239690 KRTAP20-1Q3LI63 56 aa2.3□□□□□ -2.04
NUDCD1-201ENST00000239690 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.28□□□□□ -2.04
NUDCD1-201ENST00000239690 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
NUDCD1-201ENST00000239690 KRTAP5-3Q6L8H2 238 aa2.18□□□□□ -2.06
NUDCD1-201ENST00000239690 KRTAP9-9Q9BYP9 154 aa2.17□□□□□ -2.06
NUDCD1-201ENST00000239690 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
NUDCD1-201ENST00000239690 MDN1Q9NU22 5596 aa2.16□□□□□ -2.06
NUDCD1-201ENST00000239690 KRTAP4-11Q9BYQ6 195 aa2.16□□□□□ -2.06
NUDCD1-201ENST00000239690 KRTAP4-2Q9BYR5 136 aa2.14□□□□□ -2.07
NUDCD1-201ENST00000239690 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
NUDCD1-201ENST00000239690 KRTAP4-12Q9BQ66 201 aa2.1□□□□□ -2.07
NUDCD1-201ENST00000239690 KRTAP5-9P26371 169 aa2.1□□□□□ -2.07
NUDCD1-201ENST00000239690 LCE4AQ5TA78 99 aa2.09□□□□□ -2.07
NUDCD1-201ENST00000239690 NEBP20929 6669 aa2.01□□□□□ -2.09
NUDCD1-201ENST00000239690 KRTAP20-2Q3LI61 65 aa1.93□□□□□ -2.1
NUDCD1-201ENST00000239690 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
NUDCD1-201ENST00000239690 LCE1FQ5T754 118 aa1.83□□□□□ -2.12
NUDCD1-201ENST00000239690 KRTAP5-4Q6L8H1 288 aa1.82□□□□□ -2.12
NUDCD1-201ENST00000239690 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
NUDCD1-201ENST00000239690 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
NUDCD1-201ENST00000239690 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.76□□□□□ -2.13
NUDCD1-201ENST00000239690 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
NUDCD1-201ENST00000239690 HMCN1Q96RW7 5635 aa1.65□□□□□ -2.15
NUDCD1-201ENST00000239690 KRTAP5-2Q701N4 177 aa1.63□□□□□ -2.15
NUDCD1-201ENST00000239690 AHNAK2Q8IVF2 5795 aa1.6□□□□□ -2.15
NUDCD1-201ENST00000239690 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
NUDCD1-201ENST00000239690 KRTAP5-1Q6L8H4 278 aa1.5□□□□□ -2.17
NUDCD1-201ENST00000239690 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
NUDCD1-201ENST00000239690 KRTAP5-8O75690 187 aa1.38□□□□□ -2.19
NUDCD1-201ENST00000239690 KRTAP5-11Q6L8G4 156 aa1.38□□□□□ -2.19
NUDCD1-201ENST00000239690 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.2
NUDCD1-201ENST00000239690 MUC5BQ9HC84 5762 aaPredicted RBP1.33□□□□□ -2.2
NUDCD1-201ENST00000239690 KRTAP5-7Q6L8G8 165 aa1.3□□□□□ -2.2
NUDCD1-201ENST00000239690 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
NUDCD1-201ENST00000239690 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 79.7 ms