RNA–Protein interactions for RNA: ENST00000238831.8

YIPF4-201, Transcript of Yip1 domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF4, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-201ENST00000238831 TNXBP22105 4242 aa2.72□□□□□ -1.97
YIPF4-201ENST00000238831 MT1LQ93083 61 aa2.7□□□□□ -1.98
YIPF4-201ENST00000238831 KRTAP17-1Q9BYP8 105 aa2.7□□□□□ -1.98
YIPF4-201ENST00000238831 LCE5AQ5TCM9 118 aa2.69□□□□□ -1.98
YIPF4-201ENST00000238831 LOC100996750A0A140TA64 210 aa2.68□□□□□ -1.98
YIPF4-201ENST00000238831 MT1EP04732 61 aa2.67□□□□□ -1.98
YIPF4-201ENST00000238831 KRTAP9-2Q9BYQ4 174 aa2.66□□□□□ -1.98
YIPF4-201ENST00000238831 LPAP08519 4548 aa2.63□□□□□ -1.99
YIPF4-201ENST00000238831 MT1MQ8N339 61 aa2.63□□□□□ -1.99
YIPF4-201ENST00000238831 KRTAP4-3Q9BYR4 195 aa2.62□□□□□ -1.99
YIPF4-201ENST00000238831 KRTAP19-6Q3LI70 58 aa2.59□□□□□ -2
YIPF4-201ENST00000238831 KRTAP20-1Q3LI63 56 aa2.57□□□□□ -2
YIPF4-201ENST00000238831 LCE1CQ5T751 118 aa2.56□□□□□ -2
YIPF4-201ENST00000238831 LCE1EQ5T753 118 aa2.56□□□□□ -2
YIPF4-201ENST00000238831 LCE1FQ5T754 118 aa2.56□□□□□ -2
YIPF4-201ENST00000238831 LCE1AQ5T7P2 110 aa2.56□□□□□ -2
YIPF4-201ENST00000238831 USH2AO75445 5202 aa2.54□□□□□ -2
YIPF4-201ENST00000238831 KRTAP9-6A0A140TA67 174 aa2.53□□□□□ -2
YIPF4-201ENST00000238831 KRTAP4-9Q9BYQ8 210 aa2.53□□□□□ -2.01
YIPF4-201ENST00000238831 KRTAP19-2Q3LHN2 52 aa2.51□□□□□ -2.01
YIPF4-201ENST00000238831 MT1AP04731 61 aa2.5□□□□□ -2.01
YIPF4-201ENST00000238831 MUC12Q9UKN1 5478 aa2.5□□□□□ -2.01
YIPF4-201ENST00000238831 SYNE2Q8WXH0 6885 aaKnown RBP2.44□□□□□ -2.02
YIPF4-201ENST00000238831 KRTAP2-3P0C7H8 128 aa2.43□□□□□ -2.02
YIPF4-201ENST00000238831 KRTAP2-4Q9BYR9 128 aa2.43□□□□□ -2.02
YIPF4-201ENST00000238831 KRTAP2-1Q9BYU5 128 aa2.43□□□□□ -2.02
YIPF4-201ENST00000238831 KRTAP9-7A8MTY7 169 aa2.42□□□□□ -2.02
YIPF4-201ENST00000238831 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
YIPF4-201ENST00000238831 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
YIPF4-201ENST00000238831 LCE4AQ5TA78 99 aa2.29□□□□□ -2.04
YIPF4-201ENST00000238831 MDN1Q9NU22 5596 aa2.29□□□□□ -2.04
YIPF4-201ENST00000238831 KRTAP19-7Q3SYF9 63 aa2.29□□□□□ -2.04
YIPF4-201ENST00000238831 KRTAP9-4Q9BYQ2 154 aa2.27□□□□□ -2.05
YIPF4-201ENST00000238831 KRTAP6-3Q3LI67 103 aa2.25□□□□□ -2.05
YIPF4-201ENST00000238831 KRTAP2-2Q9BYT5 123 aa2.25□□□□□ -2.05
YIPF4-201ENST00000238831 NEBP20929 6669 aa2.25□□□□□ -2.05
YIPF4-201ENST00000238831 MUC2Q02817 5179 aa2.24□□□□□ -2.05
YIPF4-201ENST00000238831 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.23□□□□□ -2.05
YIPF4-201ENST00000238831 KMT2DO14686 5537 aa2.22□□□□□ -2.05
YIPF4-201ENST00000238831 KRTAP9-9Q9BYP9 154 aa2.22□□□□□ -2.05
YIPF4-201ENST00000238831 SSPOA2VEC9 5147 aa2.21□□□□□ -2.06
YIPF4-201ENST00000238831 LCE2AQ5TA79 106 aaPredicted RBP2.19□□□□□ -2.06
YIPF4-201ENST00000238831 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
YIPF4-201ENST00000238831 FCGBPQ9Y6R7 5405 aaPredicted RBP2.17□□□□□ -2.06
YIPF4-201ENST00000238831 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
YIPF4-201ENST00000238831 FSIP2Q5CZC0 6907 aa2.12□□□□□ -2.07
YIPF4-201ENST00000238831 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
YIPF4-201ENST00000238831 MACF1Q9UPN3 7388 aaKnown RBP2.11□□□□□ -2.07
YIPF4-201ENST00000238831 KRTAP9-6A8MVA2 160 aa2.1□□□□□ -2.07
YIPF4-201ENST00000238831 KRTAP20-2Q3LI61 65 aa2.07□□□□□ -2.08
YIPF4-201ENST00000238831 SYNE1Q8NF91 8797 aaKnown RBP2.07□□□□□ -2.08
YIPF4-201ENST00000238831 KRTAP4-11Q9BYQ6 195 aa2.05□□□□□ -2.08
YIPF4-201ENST00000238831 OBSCNQ5VST9 7968 aa1.99□□□□□ -2.09
YIPF4-201ENST00000238831 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
YIPF4-201ENST00000238831 KRTAP4-6Q9BYQ5 205 aa1.95□□□□□ -2.1
YIPF4-201ENST00000238831 DSTQ03001 7570 aaKnown RBP1.94□□□□□ -2.1
YIPF4-201ENST00000238831 KRTAP4-12Q9BQ66 201 aa1.94□□□□□ -2.1
YIPF4-201ENST00000238831 KRTAP4-2Q9BYR5 136 aa1.94□□□□□ -2.1
YIPF4-201ENST00000238831 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
YIPF4-201ENST00000238831 KRTAP5-9P26371 169 aa1.83□□□□□ -2.12
YIPF4-201ENST00000238831 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
YIPF4-201ENST00000238831 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
YIPF4-201ENST00000238831 KRTAP5-4Q6L8H1 288 aa1.66□□□□□ -2.14
YIPF4-201ENST00000238831 KRTAP5-5Q701N2 237 aaPredicted RBP1.66□□□□□ -2.14
YIPF4-201ENST00000238831 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
YIPF4-201ENST00000238831 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
YIPF4-201ENST00000238831 KRTAP5-3Q6L8H2 238 aa1.48□□□□□ -2.17
YIPF4-201ENST00000238831 KRTAP5-2Q701N4 177 aa1.42□□□□□ -2.18
YIPF4-201ENST00000238831 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.38□□□□□ -2.19
YIPF4-201ENST00000238831 KRTAP5-8O75690 187 aa1.37□□□□□ -2.19
YIPF4-201ENST00000238831 KRTAP5-11Q6L8G4 156 aa1.35□□□□□ -2.19
YIPF4-201ENST00000238831 KRTAP5-10Q6L8G5 202 aa1.34□□□□□ -2.19
YIPF4-201ENST00000238831 KRTAP5-1Q6L8H4 278 aa1.26□□□□□ -2.21
YIPF4-201ENST00000238831 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
YIPF4-201ENST00000238831 KRTAP5-7Q6L8G8 165 aa1.18□□□□□ -2.22
YIPF4-201ENST00000238831 KRTAP21-2Q3LI59 83 aa1.12□□□□□ -2.23
YIPF4-201ENST00000238831 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms