RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.59
SLIRP-201ENST00000238688 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
SLIRP-201ENST00000238688 SPRR2EP22531 72 aa5.08□□□□□ -1.6
SLIRP-201ENST00000238688 SPRR2BP35325 72 aa5.08□□□□□ -1.6
SLIRP-201ENST00000238688 SPRR2AP35326 72 aa5.08□□□□□ -1.6
SLIRP-201ENST00000238688 KRTAP4-12Q9BQ66 201 aa5.07□□□□□ -1.6
SLIRP-201ENST00000238688 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
SLIRP-201ENST00000238688 KRTAP12-3P60328 96 aa5□□□□□ -1.61
SLIRP-201ENST00000238688 KRTAP19-4Q3LI73 84 aa4.98□□□□□ -1.61
SLIRP-201ENST00000238688 KRTAP15-1Q3LI76 137 aa4.94□□□□□ -1.62
SLIRP-201ENST00000238688 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
SLIRP-201ENST00000238688 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
SLIRP-201ENST00000238688 KRTAP2-2Q9BYT5 123 aa4.93□□□□□ -1.62
SLIRP-201ENST00000238688 KRTAP2-1Q9BYU5 128 aa4.93□□□□□ -1.62
SLIRP-201ENST00000238688 SPRR2DP22532 72 aa4.91□□□□□ -1.62
SLIRP-201ENST00000238688 KRTAP19-5Q3LI72 72 aa4.87□□□□□ -1.63
SLIRP-201ENST00000238688 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
SLIRP-201ENST00000238688 SPRR5A0A1B0GTR4 108 aa4.81□□□□□ -1.64
SLIRP-201ENST00000238688 MT1EP04732 61 aa4.76□□□□□ -1.65
SLIRP-201ENST00000238688 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
SLIRP-201ENST00000238688 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
SLIRP-201ENST00000238688 KRTAP4-7Q9BYR0 210 aa4.69□□□□□ -1.66
SLIRP-201ENST00000238688 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
SLIRP-201ENST00000238688 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
SLIRP-201ENST00000238688 MT1LQ93083 61 aa4.67□□□□□ -1.66
SLIRP-201ENST00000238688 H3BS24 57 aa4.66□□□□□ -1.66
SLIRP-201ENST00000238688 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
SLIRP-201ENST00000238688 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
SLIRP-201ENST00000238688 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
SLIRP-201ENST00000238688 MT1GP13640 62 aa4.61□□□□□ -1.67
SLIRP-201ENST00000238688 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.67
SLIRP-201ENST00000238688 NDUFAF8A1L188 74 aa4.49□□□□□ -1.69
SLIRP-201ENST00000238688 MT1MQ8N339 61 aa4.48□□□□□ -1.69
SLIRP-201ENST00000238688 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
SLIRP-201ENST00000238688 GPR98Q8WXG9 6306 aa4.46□□□□□ -1.69
SLIRP-201ENST00000238688 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
SLIRP-201ENST00000238688 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
SLIRP-201ENST00000238688 HMCN1Q96RW7 5635 aa4.32□□□□□ -1.72
SLIRP-201ENST00000238688 KRTAP9-6A8MVA2 160 aa4.31□□□□□ -1.72
SLIRP-201ENST00000238688 MT4P47944 62 aa4.31□□□□□ -1.72
SLIRP-201ENST00000238688 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
SLIRP-201ENST00000238688 AHNAK2Q8IVF2 5795 aa4.24□□□□□ -1.73
SLIRP-201ENST00000238688 KRTAP5-10Q6L8G5 202 aa4.15□□□□□ -1.75
SLIRP-201ENST00000238688 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
SLIRP-201ENST00000238688 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
SLIRP-201ENST00000238688 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
SLIRP-201ENST00000238688 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
SLIRP-201ENST00000238688 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
SLIRP-201ENST00000238688 MT1AP04731 61 aa4.02□□□□□ -1.77
SLIRP-201ENST00000238688 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
SLIRP-201ENST00000238688 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
SLIRP-201ENST00000238688 INE1O15225 51 aa3.9□□□□□ -1.79
SLIRP-201ENST00000238688 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
SLIRP-201ENST00000238688 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
SLIRP-201ENST00000238688 MT3P25713 68 aa3.66□□□□□ -1.82
SLIRP-201ENST00000238688 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
SLIRP-201ENST00000238688 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
SLIRP-201ENST00000238688 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
SLIRP-201ENST00000238688 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
SLIRP-201ENST00000238688 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
SLIRP-201ENST00000238688 AHNAKQ09666 5890 aaKnown RBP3.48□□□□□ -1.85
SLIRP-201ENST00000238688 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
SLIRP-201ENST00000238688 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
SLIRP-201ENST00000238688 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
SLIRP-201ENST00000238688 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
SLIRP-201ENST00000238688 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
SLIRP-201ENST00000238688 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
SLIRP-201ENST00000238688 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
SLIRP-201ENST00000238688 PRM1P04553 51 aa2.96□□□□□ -1.94
SLIRP-201ENST00000238688 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
SLIRP-201ENST00000238688 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
SLIRP-201ENST00000238688 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
SLIRP-201ENST00000238688 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
SLIRP-201ENST00000238688 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
SLIRP-201ENST00000238688 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
SLIRP-201ENST00000238688 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
SLIRP-201ENST00000238688 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 83.8 ms