RNA–Protein interactions for RNA: ENST00000233612.8

GCA-201, Transcript of grancalcin, humanhuman

TSL 2 BASIC

Gene GCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-201ENST00000233612 MT1GP13640 62 aa7.6□□□□□ -1.19
GCA-201ENST00000233612 KRTAP4-7Q9BYR0 210 aa7.6□□□□□ -1.19
GCA-201ENST00000233612 SPRR2FQ96RM1 72 aa7.58□□□□□ -1.2
GCA-201ENST00000233612 MUC12Q9UKN1 5478 aa7.57□□□□□ -1.2
GCA-201ENST00000233612 KRTAP5-9P26371 169 aa7.52□□□□□ -1.21
GCA-201ENST00000233612 KRTAP9-6A8MVA2 160 aa7.49□□□□□ -1.21
GCA-201ENST00000233612 MT1MQ8N339 61 aa7.49□□□□□ -1.21
GCA-201ENST00000233612 LCE5AQ5TCM9 118 aa7.47□□□□□ -1.21
GCA-201ENST00000233612 SYNE2Q8WXH0 6885 aaKnown RBP7.46□□□□□ -1.22
GCA-201ENST00000233612 H3BS24 57 aa7.38□□□□□ -1.23
GCA-201ENST00000233612 KRTAP9-6A0A140TA67 174 aa7.36□□□□□ -1.23
GCA-201ENST00000233612 KRTAP4-3Q9BYR4 195 aa7.32□□□□□ -1.24
GCA-201ENST00000233612 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.28□□□□□ -1.24
GCA-201ENST00000233612 LCE1AQ5T7P2 110 aa7.28□□□□□ -1.24
GCA-201ENST00000233612 KRTAP6-3Q3LI67 103 aa7.25□□□□□ -1.25
GCA-201ENST00000233612 MDN1Q9NU22 5596 aa7.19□□□□□ -1.26
GCA-201ENST00000233612 SPRR2EP22531 72 aa7.12□□□□□ -1.27
GCA-201ENST00000233612 SPRR2BP35325 72 aa7.12□□□□□ -1.27
GCA-201ENST00000233612 SPRR2AP35326 72 aa7.12□□□□□ -1.27
GCA-201ENST00000233612 A0A0A0MQY5 61 aa7.08□□□□□ -1.28
GCA-201ENST00000233612 KRTAP2-3P0C7H8 128 aa7.08□□□□□ -1.28
GCA-201ENST00000233612 KRTAP2-4Q9BYR9 128 aa7.08□□□□□ -1.28
GCA-201ENST00000233612 KRTAP2-1Q9BYU5 128 aa7.08□□□□□ -1.28
GCA-201ENST00000233612 DSTQ03001 7570 aaKnown RBP7.01□□□□□ -1.29
GCA-201ENST00000233612 LCE3BQ5TA77 95 aa7□□□□□ -1.29
GCA-201ENST00000233612 SPRR2DP22532 72 aa6.86□□□□□ -1.31
GCA-201ENST00000233612 KRTAP9-9Q9BYP9 154 aa6.83□□□□□ -1.32
GCA-201ENST00000233612 KRTAP9-4Q9BYQ2 154 aa6.83□□□□□ -1.32
GCA-201ENST00000233612 KRTAP9-7A8MTY7 169 aa6.77□□□□□ -1.32
GCA-201ENST00000233612 KRTAP5-5Q701N2 237 aaPredicted RBP6.77□□□□□ -1.33
GCA-201ENST00000233612 NEBP20929 6669 aa6.73□□□□□ -1.33
GCA-201ENST00000233612 KRTAP4-12Q9BQ66 201 aa6.73□□□□□ -1.33
GCA-201ENST00000233612 MT1AP04731 61 aa6.68□□□□□ -1.34
GCA-201ENST00000233612 INE1O15225 51 aa6.65□□□□□ -1.34
GCA-201ENST00000233612 KRTAP6-1Q3LI64 71 aa6.6□□□□□ -1.35
GCA-201ENST00000233612 LCE1DQ5T752 114 aa6.52□□□□□ -1.37
GCA-201ENST00000233612 SYNE1Q8NF91 8797 aaKnown RBP6.46□□□□□ -1.38
GCA-201ENST00000233612 KRTAP4-9Q9BYQ8 210 aa6.4□□□□□ -1.38
GCA-201ENST00000233612 KRTAP4-2Q9BYR5 136 aa6.39□□□□□ -1.39
GCA-201ENST00000233612 KRTAP5-4Q6L8H1 288 aa6.36□□□□□ -1.39
GCA-201ENST00000233612 KRTAP5-3Q6L8H2 238 aa6.21□□□□□ -1.42
GCA-201ENST00000233612 KRTAP12-4P60329 112 aa6.18□□□□□ -1.42
GCA-201ENST00000233612 KRTAP2-2Q9BYT5 123 aa6.17□□□□□ -1.42
GCA-201ENST00000233612 LCE4AQ5TA78 99 aa6.16□□□□□ -1.42
GCA-201ENST00000233612 KRTAP4-11Q9BYQ6 195 aa6.05□□□□□ -1.44
GCA-201ENST00000233612 MT3P25713 68 aa6.04□□□□□ -1.44
GCA-201ENST00000233612 KRTAP20-1Q3LI63 56 aa6.03□□□□□ -1.44
GCA-201ENST00000233612 KRTAP6-2Q3LI66 62 aa6.03□□□□□ -1.44
GCA-201ENST00000233612 LCE3DQ9BYE3 92 aa5.98□□□□□ -1.45
GCA-201ENST00000233612 MT4P47944 62 aa5.92□□□□□ -1.46
GCA-201ENST00000233612 KRTAP20-2Q3LI61 65 aa5.89□□□□□ -1.47
GCA-201ENST00000233612 LCE3EQ5T5B0 92 aa5.85□□□□□ -1.47
GCA-201ENST00000233612 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
GCA-201ENST00000233612 HMCN1Q96RW7 5635 aa5.8□□□□□ -1.48
GCA-201ENST00000233612 OBSCNQ5VST9 7968 aa5.56□□□□□ -1.52
GCA-201ENST00000233612 LCE1EQ5T753 118 aa5.24□□□□□ -1.57
GCA-201ENST00000233612 PRM1P04553 51 aa5.18□□□□□ -1.58
GCA-201ENST00000233612 AHNAK2Q8IVF2 5795 aa5.02□□□□□ -1.61
GCA-201ENST00000233612 KRTAP5-1Q6L8H4 278 aa4.98□□□□□ -1.61
GCA-201ENST00000233612 KRTAP5-10Q6L8G5 202 aa4.93□□□□□ -1.62
GCA-201ENST00000233612 MUC5ACP98088 5654 aa4.9□□□□□ -1.63
GCA-201ENST00000233612 LCE1CQ5T751 118 aa4.87□□□□□ -1.63
GCA-201ENST00000233612 LCE1BQ5T7P3 118 aa4.87□□□□□ -1.63
GCA-201ENST00000233612 KRTAP5-8O75690 187 aa4.86□□□□□ -1.63
GCA-201ENST00000233612 KRTAP5-7Q6L8G8 165 aa4.81□□□□□ -1.64
GCA-201ENST00000233612 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.61□□□□□ -1.67
GCA-201ENST00000233612 GPR98Q8WXG9 6306 aa4.38□□□□□ -1.71
GCA-201ENST00000233612 KRTAP21-2Q3LI59 83 aa4.35□□□□□ -1.71
GCA-201ENST00000233612 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
GCA-201ENST00000233612 MUC5BQ9HC84 5762 aaPredicted RBP4.15□□□□□ -1.75
GCA-201ENST00000233612 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
GCA-201ENST00000233612 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
GCA-201ENST00000233612 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
GCA-201ENST00000233612 PHGR1C9JFL3 82 aa3.65□□□□□ -1.82
GCA-201ENST00000233612 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
GCA-201ENST00000233612 KRTAP21-1Q3LI58 79 aa3.27□□□□□ -1.89
GCA-201ENST00000233612 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 95.7 ms