RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
SPARC-201ENST00000231061 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
SPARC-201ENST00000231061 KRTAP19-5Q3LI72 72 aa2.94□□□□□ -1.94
SPARC-201ENST00000231061 KMT2DO14686 5537 aa2.93□□□□□ -1.94
SPARC-201ENST00000231061 LOC100996750A0A140TA64 210 aa2.9□□□□□ -1.95
SPARC-201ENST00000231061 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.95
SPARC-201ENST00000231061 MACF1Q9UPN3 7388 aaKnown RBP2.89□□□□□ -1.95
SPARC-201ENST00000231061 KRTAP4-8A0A0G2JLE6 195 aa2.87□□□□□ -1.95
SPARC-201ENST00000231061 KRTAP4-8Q9BYQ9 185 aa2.87□□□□□ -1.95
SPARC-201ENST00000231061 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
SPARC-201ENST00000231061 KRTAP19-4Q3LI73 84 aa2.84□□□□□ -1.95
SPARC-201ENST00000231061 KRTAP9-7A8MTY7 169 aa2.83□□□□□ -1.96
SPARC-201ENST00000231061 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
SPARC-201ENST00000231061 FCGBPQ9Y6R7 5405 aaPredicted RBP2.83□□□□□ -1.96
SPARC-201ENST00000231061 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
SPARC-201ENST00000231061 LCE4AQ5TA78 99 aa2.82□□□□□ -1.96
SPARC-201ENST00000231061 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
SPARC-201ENST00000231061 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
SPARC-201ENST00000231061 KRTAP4-7Q9BYR0 210 aa2.77□□□□□ -1.97
SPARC-201ENST00000231061 KRTAP9-6A8MVA2 160 aa2.76□□□□□ -1.97
SPARC-201ENST00000231061 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.76□□□□□ -1.97
SPARC-201ENST00000231061 KRTAP19-7Q3SYF9 63 aa2.76□□□□□ -1.97
SPARC-201ENST00000231061 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
SPARC-201ENST00000231061 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
SPARC-201ENST00000231061 KRTAP2-4Q9BYR9 128 aa2.74□□□□□ -1.97
SPARC-201ENST00000231061 KRTAP2-1Q9BYU5 128 aa2.74□□□□□ -1.97
SPARC-201ENST00000231061 MUC12Q9UKN1 5478 aa2.71□□□□□ -1.98
SPARC-201ENST00000231061 MT1LQ93083 61 aa2.69□□□□□ -1.98
SPARC-201ENST00000231061 MT1EP04732 61 aa2.69□□□□□ -1.98
SPARC-201ENST00000231061 PRM1P04553 51 aa2.66□□□□□ -1.98
SPARC-201ENST00000231061 MDN1Q9NU22 5596 aa2.66□□□□□ -1.98
SPARC-201ENST00000231061 SPRR2FQ96RM1 72 aa2.62□□□□□ -1.99
SPARC-201ENST00000231061 KRTAP19-6Q3LI70 58 aa2.59□□□□□ -1.99
SPARC-201ENST00000231061 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
SPARC-201ENST00000231061 MT1GP13640 62 aa2.57□□□□□ -2
SPARC-201ENST00000231061 MT3P25713 68 aa2.56□□□□□ -2
SPARC-201ENST00000231061 LCE3BQ5TA77 95 aa2.54□□□□□ -2
SPARC-201ENST00000231061 NEBP20929 6669 aa2.54□□□□□ -2
SPARC-201ENST00000231061 SPRR2EP22531 72 aa2.52□□□□□ -2.01
SPARC-201ENST00000231061 SPRR2BP35325 72 aa2.52□□□□□ -2.01
SPARC-201ENST00000231061 SPRR2AP35326 72 aa2.52□□□□□ -2.01
SPARC-201ENST00000231061 MT1MQ8N339 61 aa2.52□□□□□ -2.01
SPARC-201ENST00000231061 KRTAP19-3Q7Z4W3 81 aa2.51□□□□□ -2.01
SPARC-201ENST00000231061 KRTAP20-1Q3LI63 56 aa2.46□□□□□ -2.02
SPARC-201ENST00000231061 SPRR2DP22532 72 aa2.41□□□□□ -2.02
SPARC-201ENST00000231061 KRTAP4-9Q9BYQ8 210 aa2.39□□□□□ -2.03
SPARC-201ENST00000231061 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
SPARC-201ENST00000231061 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
SPARC-201ENST00000231061 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
SPARC-201ENST00000231061 MT4P47944 62 aa2.29□□□□□ -2.04
SPARC-201ENST00000231061 KRTAP4-2Q9BYR5 136 aa2.29□□□□□ -2.04
SPARC-201ENST00000231061 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.04
SPARC-201ENST00000231061 MT1AP04731 61 aa2.26□□□□□ -2.05
SPARC-201ENST00000231061 KRTAP6-2Q3LI66 62 aa2.21□□□□□ -2.06
SPARC-201ENST00000231061 KRTAP5-9P26371 169 aa2.17□□□□□ -2.06
SPARC-201ENST00000231061 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
SPARC-201ENST00000231061 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
SPARC-201ENST00000231061 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
SPARC-201ENST00000231061 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
SPARC-201ENST00000231061 KRTAP5-3Q6L8H2 238 aa1.91□□□□□ -2.1
SPARC-201ENST00000231061 KRTAP5-4Q6L8H1 288 aa1.87□□□□□ -2.11
SPARC-201ENST00000231061 MUC5ACP98088 5654 aa1.84□□□□□ -2.11
SPARC-201ENST00000231061 KRTAP20-2Q3LI61 65 aa1.81□□□□□ -2.12
SPARC-201ENST00000231061 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
SPARC-201ENST00000231061 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
SPARC-201ENST00000231061 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
SPARC-201ENST00000231061 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
SPARC-201ENST00000231061 KRTAP5-8O75690 187 aa1.65□□□□□ -2.15
SPARC-201ENST00000231061 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
SPARC-201ENST00000231061 KRTAP5-11Q6L8G4 156 aa1.61□□□□□ -2.15
SPARC-201ENST00000231061 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
SPARC-201ENST00000231061 KRTAP5-1Q6L8H4 278 aa1.54□□□□□ -2.16
SPARC-201ENST00000231061 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.49□□□□□ -2.17
SPARC-201ENST00000231061 KRTAP4-4Q9BYR3 166 aa1.47□□□□□ -2.17
SPARC-201ENST00000231061 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
SPARC-201ENST00000231061 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
SPARC-201ENST00000231061 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 67.4 ms