RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 KRTAP19-6Q3LI70 58 aa3.48□□□□□ -1.85
LAMA4-201ENST00000230538 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
LAMA4-201ENST00000230538 KMT2CQ8NEZ4 4911 aaKnown RBP3.45□□□□□ -1.86
LAMA4-201ENST00000230538 KRTAP9-6A0A140TA67 174 aa3.43□□□□□ -1.86
LAMA4-201ENST00000230538 BIRC6Q9NR09 4857 aa3.41□□□□□ -1.86
LAMA4-201ENST00000230538 PCLOQ9Y6V0 5065 aa3.38□□□□□ -1.87
LAMA4-201ENST00000230538 KRTAP4-9Q9BYQ8 210 aa3.36□□□□□ -1.87
LAMA4-201ENST00000230538 MT1AP04731 61 aa3.33□□□□□ -1.88
LAMA4-201ENST00000230538 KRTAP19-7Q3SYF9 63 aa3.32□□□□□ -1.88
LAMA4-201ENST00000230538 KRTAP2-3P0C7H8 128 aa3.28□□□□□ -1.88
LAMA4-201ENST00000230538 KRTAP2-4Q9BYR9 128 aa3.28□□□□□ -1.88
LAMA4-201ENST00000230538 KRTAP2-1Q9BYU5 128 aa3.28□□□□□ -1.88
LAMA4-201ENST00000230538 LCE5AQ5TCM9 118 aa3.27□□□□□ -1.89
LAMA4-201ENST00000230538 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
LAMA4-201ENST00000230538 KRTAP9-7A8MTY7 169 aa3.21□□□□□ -1.9
LAMA4-201ENST00000230538 LCE2AQ5TA79 106 aaPredicted RBP3.2□□□□□ -1.9
LAMA4-201ENST00000230538 FSIP2Q5CZC0 6907 aa3.17□□□□□ -1.9
LAMA4-201ENST00000230538 HMCN2Q8NDA2 5059 aa3.16□□□□□ -1.9
LAMA4-201ENST00000230538 EPPK1P58107 5090 aaKnown RBP3.15□□□□□ -1.9
LAMA4-201ENST00000230538 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
LAMA4-201ENST00000230538 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
LAMA4-201ENST00000230538 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
LAMA4-201ENST00000230538 KRTAP9-4Q9BYQ2 154 aa3.1□□□□□ -1.91
LAMA4-201ENST00000230538 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
LAMA4-201ENST00000230538 ABCA13Q86UQ4 5058 aa3.07□□□□□ -1.92
LAMA4-201ENST00000230538 FAT4Q6V0I7 4981 aa3.06□□□□□ -1.92
LAMA4-201ENST00000230538 KRTAP6-3Q3LI67 103 aa3.05□□□□□ -1.92
LAMA4-201ENST00000230538 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
LAMA4-201ENST00000230538 LCE4AQ5TA78 99 aa3.03□□□□□ -1.92
LAMA4-201ENST00000230538 LCE1CQ5T751 118 aa3□□□□□ -1.93
LAMA4-201ENST00000230538 LCE1EQ5T753 118 aa3□□□□□ -1.93
LAMA4-201ENST00000230538 LCE1FQ5T754 118 aa3□□□□□ -1.93
LAMA4-201ENST00000230538 RNF213Q63HN8 5207 aa2.99□□□□□ -1.93
LAMA4-201ENST00000230538 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.95□□□□□ -1.94
LAMA4-201ENST00000230538 SYNE1Q8NF91 8797 aaKnown RBP2.94□□□□□ -1.94
LAMA4-201ENST00000230538 KRTAP2-2Q9BYT5 123 aa2.93□□□□□ -1.94
LAMA4-201ENST00000230538 UBR4Q5T4S7 5183 aa2.89□□□□□ -1.95
LAMA4-201ENST00000230538 MUC2Q02817 5179 aa2.88□□□□□ -1.95
LAMA4-201ENST00000230538 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
LAMA4-201ENST00000230538 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
LAMA4-201ENST00000230538 KRTAP4-11Q9BYQ6 195 aa2.63□□□□□ -1.99
LAMA4-201ENST00000230538 KMT2DO14686 5537 aa2.57□□□□□ -2
LAMA4-201ENST00000230538 KRTAP4-6Q9BYQ5 205 aa2.55□□□□□ -2
LAMA4-201ENST00000230538 FCGBPQ9Y6R7 5405 aaPredicted RBP2.51□□□□□ -2.01
LAMA4-201ENST00000230538 KRTAP5-9P26371 169 aa2.51□□□□□ -2.01
LAMA4-201ENST00000230538 USH2AO75445 5202 aa2.5□□□□□ -2.01
LAMA4-201ENST00000230538 DSTQ03001 7570 aaKnown RBP2.5□□□□□ -2.01
LAMA4-201ENST00000230538 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
LAMA4-201ENST00000230538 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
LAMA4-201ENST00000230538 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
LAMA4-201ENST00000230538 NEBP20929 6669 aa2.4□□□□□ -2.02
LAMA4-201ENST00000230538 MACF1Q9UPN3 7388 aaKnown RBP2.39□□□□□ -2.03
LAMA4-201ENST00000230538 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
LAMA4-201ENST00000230538 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
LAMA4-201ENST00000230538 KRTAP5-5Q701N2 237 aaPredicted RBP2.35□□□□□ -2.03
LAMA4-201ENST00000230538 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
LAMA4-201ENST00000230538 MUC12Q9UKN1 5478 aa2.2□□□□□ -2.06
LAMA4-201ENST00000230538 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
LAMA4-201ENST00000230538 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
LAMA4-201ENST00000230538 GPR98Q8WXG9 6306 aa2.04□□□□□ -2.08
LAMA4-201ENST00000230538 KRTAP5-3Q6L8H2 238 aa2□□□□□ -2.09
LAMA4-201ENST00000230538 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
LAMA4-201ENST00000230538 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
LAMA4-201ENST00000230538 KRTAP5-10Q6L8G5 202 aa1.83□□□□□ -2.12
LAMA4-201ENST00000230538 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
LAMA4-201ENST00000230538 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
LAMA4-201ENST00000230538 KRTAP5-2Q701N4 177 aa1.72□□□□□ -2.13
LAMA4-201ENST00000230538 HMCN1Q96RW7 5635 aa1.69□□□□□ -2.14
LAMA4-201ENST00000230538 KRTAP5-1Q6L8H4 278 aa1.65□□□□□ -2.15
LAMA4-201ENST00000230538 AHNAK2Q8IVF2 5795 aa1.62□□□□□ -2.15
LAMA4-201ENST00000230538 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
LAMA4-201ENST00000230538 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.15
LAMA4-201ENST00000230538 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
LAMA4-201ENST00000230538 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
LAMA4-201ENST00000230538 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
LAMA4-201ENST00000230538 KRTAP5-7Q6L8G8 165 aa1.37□□□□□ -2.19
LAMA4-201ENST00000230538 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 12.9 ms