RNA–Protein interactions for RNA: ENST00000229866.10

RNF8-201, Transcript of ring finger protein 8, humanhuman

TSL 2

Gene RNF8, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-201ENST00000229866 INE1O15225 51 aa7.54□□□□□ -1.2
RNF8-201ENST00000229866 KRTAP9-6A8MVA2 160 aa7.47□□□□□ -1.21
RNF8-201ENST00000229866 KRTAP4-7Q9BYR0 210 aa7.42□□□□□ -1.22
RNF8-201ENST00000229866 MACF1Q9UPN3 7388 aaKnown RBP7.35□□□□□ -1.23
RNF8-201ENST00000229866 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.31□□□□□ -1.24
RNF8-201ENST00000229866 KRTAP2-3P0C7H8 128 aa7.25□□□□□ -1.25
RNF8-201ENST00000229866 KRTAP2-4Q9BYR9 128 aa7.25□□□□□ -1.25
RNF8-201ENST00000229866 KRTAP2-1Q9BYU5 128 aa7.25□□□□□ -1.25
RNF8-201ENST00000229866 SYNE2Q8WXH0 6885 aaKnown RBP7.17□□□□□ -1.26
RNF8-201ENST00000229866 MT1GP13640 62 aa7.15□□□□□ -1.26
RNF8-201ENST00000229866 KRTAP19-3Q7Z4W3 81 aa7.15□□□□□ -1.26
RNF8-201ENST00000229866 MT1MQ8N339 61 aa7.1□□□□□ -1.27
RNF8-201ENST00000229866 KRTAP9-7A8MTY7 169 aa7.05□□□□□ -1.28
RNF8-201ENST00000229866 KRTAP6-3Q3LI67 103 aa7.03□□□□□ -1.28
RNF8-201ENST00000229866 KRTAP4-3Q9BYR4 195 aa7.01□□□□□ -1.29
RNF8-201ENST00000229866 KRTAP5-9P26371 169 aa6.97□□□□□ -1.29
RNF8-201ENST00000229866 SPRR2FQ96RM1 72 aa6.94□□□□□ -1.3
RNF8-201ENST00000229866 LOC100996750A0A140TA64 210 aa6.94□□□□□ -1.3
RNF8-201ENST00000229866 LCE5AQ5TCM9 118 aa6.92□□□□□ -1.3
RNF8-201ENST00000229866 MUC12Q9UKN1 5478 aa6.89□□□□□ -1.31
RNF8-201ENST00000229866 MDN1Q9NU22 5596 aa6.77□□□□□ -1.33
RNF8-201ENST00000229866 SPRR2EP22531 72 aa6.68□□□□□ -1.34
RNF8-201ENST00000229866 SPRR2BP35325 72 aa6.68□□□□□ -1.34
RNF8-201ENST00000229866 SPRR2AP35326 72 aa6.68□□□□□ -1.34
RNF8-201ENST00000229866 LCE1AQ5T7P2 110 aa6.67□□□□□ -1.34
RNF8-201ENST00000229866 NEBP20929 6669 aa6.57□□□□□ -1.36
RNF8-201ENST00000229866 SPRR2DP22532 72 aa6.44□□□□□ -1.38
RNF8-201ENST00000229866 MT1AP04731 61 aa6.4□□□□□ -1.38
RNF8-201ENST00000229866 LCE3BQ5TA77 95 aa6.38□□□□□ -1.39
RNF8-201ENST00000229866 DSTQ03001 7570 aaKnown RBP6.36□□□□□ -1.39
RNF8-201ENST00000229866 KRTAP6-1Q3LI64 71 aa6.35□□□□□ -1.39
RNF8-201ENST00000229866 KRTAP12-4P60329 112 aa6.32□□□□□ -1.4
RNF8-201ENST00000229866 KRTAP5-5Q701N2 237 aaPredicted RBP6.3□□□□□ -1.4
RNF8-201ENST00000229866 KRTAP20-1Q3LI63 56 aa6.23□□□□□ -1.41
RNF8-201ENST00000229866 KRTAP4-9Q9BYQ8 210 aa6.13□□□□□ -1.43
RNF8-201ENST00000229866 KRTAP2-2Q9BYT5 123 aa6.08□□□□□ -1.44
RNF8-201ENST00000229866 LCE3DQ9BYE3 92 aa6.05□□□□□ -1.44
RNF8-201ENST00000229866 KRTAP9-4Q9BYQ2 154 aa6.03□□□□□ -1.44
RNF8-201ENST00000229866 LCE3EQ5T5B0 92 aa5.98□□□□□ -1.45
RNF8-201ENST00000229866 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
RNF8-201ENST00000229866 MT3P25713 68 aa5.78□□□□□ -1.48
RNF8-201ENST00000229866 KRTAP6-2Q3LI66 62 aa5.74□□□□□ -1.49
RNF8-201ENST00000229866 KRTAP5-4Q6L8H1 288 aa5.72□□□□□ -1.49
RNF8-201ENST00000229866 LCE4AQ5TA78 99 aa5.72□□□□□ -1.49
RNF8-201ENST00000229866 MT4P47944 62 aa5.62□□□□□ -1.51
RNF8-201ENST00000229866 LCE1DQ5T752 114 aa5.57□□□□□ -1.52
RNF8-201ENST00000229866 PRM1P04553 51 aa5.54□□□□□ -1.52
RNF8-201ENST00000229866 KRTAP4-6Q9BYQ5 205 aa5.52□□□□□ -1.53
RNF8-201ENST00000229866 HMCN1Q96RW7 5635 aa5.5□□□□□ -1.53
RNF8-201ENST00000229866 KRTAP20-2Q3LI61 65 aa5.38□□□□□ -1.55
RNF8-201ENST00000229866 KRTAP5-2Q701N4 177 aa5.27□□□□□ -1.57
RNF8-201ENST00000229866 KRTAP5-3Q6L8H2 238 aa5.19□□□□□ -1.58
RNF8-201ENST00000229866 OBSCNQ5VST9 7968 aa5.18□□□□□ -1.58
RNF8-201ENST00000229866 AHNAK2Q8IVF2 5795 aa5.03□□□□□ -1.6
RNF8-201ENST00000229866 KRTAP5-10Q6L8G5 202 aa4.84□□□□□ -1.64
RNF8-201ENST00000229866 LCE1EQ5T753 118 aa4.82□□□□□ -1.64
RNF8-201ENST00000229866 GPR98Q8WXG9 6306 aa4.76□□□□□ -1.65
RNF8-201ENST00000229866 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
RNF8-201ENST00000229866 MUC5ACP98088 5654 aa4.65□□□□□ -1.67
RNF8-201ENST00000229866 LCE1BQ5T7P3 118 aa4.59□□□□□ -1.67
RNF8-201ENST00000229866 KRTAP5-8O75690 187 aa4.58□□□□□ -1.68
RNF8-201ENST00000229866 KRTAP5-7Q6L8G8 165 aa4.54□□□□□ -1.68
RNF8-201ENST00000229866 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
RNF8-201ENST00000229866 KRTAP5-1Q6L8H4 278 aa4.49□□□□□ -1.69
RNF8-201ENST00000229866 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.69
RNF8-201ENST00000229866 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.27□□□□□ -1.73
RNF8-201ENST00000229866 KRTAP9-9Q9BYP9 154 aa4.23□□□□□ -1.73
RNF8-201ENST00000229866 KRTAP21-2Q3LI59 83 aa4.13□□□□□ -1.75
RNF8-201ENST00000229866 MUC5BQ9HC84 5762 aaPredicted RBP4.08□□□□□ -1.76
RNF8-201ENST00000229866 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
RNF8-201ENST00000229866 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.79
RNF8-201ENST00000229866 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
RNF8-201ENST00000229866 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
RNF8-201ENST00000229866 KRTAP21-1Q3LI58 79 aa3.5□□□□□ -1.85
RNF8-201ENST00000229866 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
RNF8-201ENST00000229866 PHGR1C9JFL3 82 aa3.34□□□□□ -1.87
RNF8-201ENST00000229866 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
RNF8-201ENST00000229866 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 111.9 ms