RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 SSPOA2VEC9 5147 aa5.74□□□□□ -1.49
H2AFV-201ENST00000222690 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
H2AFV-201ENST00000222690 KRTAP4-3Q9BYR4 195 aa5.73□□□□□ -1.49
H2AFV-201ENST00000222690 MUC12Q9UKN1 5478 aa5.7□□□□□ -1.5
H2AFV-201ENST00000222690 MT1GP13640 62 aa5.67□□□□□ -1.5
H2AFV-201ENST00000222690 FCGBPQ9Y6R7 5405 aaPredicted RBP5.65□□□□□ -1.51
H2AFV-201ENST00000222690 KRTAP19-4Q3LI73 84 aa5.58□□□□□ -1.52
H2AFV-201ENST00000222690 SYNE1Q8NF91 8797 aaKnown RBP5.48□□□□□ -1.53
H2AFV-201ENST00000222690 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
H2AFV-201ENST00000222690 KRTAP19-6Q3LI70 58 aa5.45□□□□□ -1.54
H2AFV-201ENST00000222690 MT1MQ8N339 61 aa5.45□□□□□ -1.54
H2AFV-201ENST00000222690 KRTAP19-3Q7Z4W3 81 aa5.42□□□□□ -1.54
H2AFV-201ENST00000222690 LCE3BQ5TA77 95 aa5.35□□□□□ -1.55
H2AFV-201ENST00000222690 SPRR2FQ96RM1 72 aa5.34□□□□□ -1.55
H2AFV-201ENST00000222690 OBSCNQ5VST9 7968 aa5.28□□□□□ -1.56
H2AFV-201ENST00000222690 KRTAP4-9Q9BYQ8 210 aa5.28□□□□□ -1.56
H2AFV-201ENST00000222690 SYNE2Q8WXH0 6885 aaKnown RBP5.22□□□□□ -1.57
H2AFV-201ENST00000222690 MACF1Q9UPN3 7388 aaKnown RBP5.18□□□□□ -1.58
H2AFV-201ENST00000222690 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
H2AFV-201ENST00000222690 MDN1Q9NU22 5596 aa5.05□□□□□ -1.6
H2AFV-201ENST00000222690 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
H2AFV-201ENST00000222690 LCE3DQ9BYE3 92 aa4.99□□□□□ -1.61
H2AFV-201ENST00000222690 KRTAP9-2Q9BYQ4 174 aa4.91□□□□□ -1.62
H2AFV-201ENST00000222690 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
H2AFV-201ENST00000222690 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
H2AFV-201ENST00000222690 MT1AP04731 61 aa4.86□□□□□ -1.63
H2AFV-201ENST00000222690 PRM1P04553 51 aa4.85□□□□□ -1.63
H2AFV-201ENST00000222690 SPRR2EP22531 72 aa4.76□□□□□ -1.65
H2AFV-201ENST00000222690 SPRR2BP35325 72 aa4.76□□□□□ -1.65
H2AFV-201ENST00000222690 SPRR2AP35326 72 aa4.76□□□□□ -1.65
H2AFV-201ENST00000222690 LCE1AQ5T7P2 110 aa4.75□□□□□ -1.65
H2AFV-201ENST00000222690 KRTAP5-5Q701N2 237 aaPredicted RBP4.72□□□□□ -1.65
H2AFV-201ENST00000222690 KRTAP6-2Q3LI66 62 aa4.6□□□□□ -1.67
H2AFV-201ENST00000222690 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
H2AFV-201ENST00000222690 SPRR2DP22532 72 aa4.52□□□□□ -1.69
H2AFV-201ENST00000222690 KRTAP5-9P26371 169 aa4.51□□□□□ -1.69
H2AFV-201ENST00000222690 MT3P25713 68 aa4.43□□□□□ -1.7
H2AFV-201ENST00000222690 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
H2AFV-201ENST00000222690 KRTAP6-3Q3LI67 103 aa4.29□□□□□ -1.72
H2AFV-201ENST00000222690 KRTAP9-6A0A140TA67 174 aa4.2□□□□□ -1.74
H2AFV-201ENST00000222690 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
H2AFV-201ENST00000222690 MT4P47944 62 aa4.14□□□□□ -1.75
H2AFV-201ENST00000222690 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.07□□□□□ -1.76
H2AFV-201ENST00000222690 KRTAP5-4Q6L8H1 288 aa3.91□□□□□ -1.78
H2AFV-201ENST00000222690 LCE1DQ5T752 114 aa3.91□□□□□ -1.78
H2AFV-201ENST00000222690 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
H2AFV-201ENST00000222690 NEBP20929 6669 aa3.83□□□□□ -1.8
H2AFV-201ENST00000222690 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
H2AFV-201ENST00000222690 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
H2AFV-201ENST00000222690 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
H2AFV-201ENST00000222690 KRTAP4-12Q9BQ66 201 aa3.8□□□□□ -1.8
H2AFV-201ENST00000222690 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
H2AFV-201ENST00000222690 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
H2AFV-201ENST00000222690 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
H2AFV-201ENST00000222690 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
H2AFV-201ENST00000222690 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
H2AFV-201ENST00000222690 KRTAP5-3Q6L8H2 238 aa3.52□□□□□ -1.85
H2AFV-201ENST00000222690 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
H2AFV-201ENST00000222690 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
H2AFV-201ENST00000222690 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.87
H2AFV-201ENST00000222690 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
H2AFV-201ENST00000222690 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
H2AFV-201ENST00000222690 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
H2AFV-201ENST00000222690 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
H2AFV-201ENST00000222690 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
H2AFV-201ENST00000222690 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
H2AFV-201ENST00000222690 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
H2AFV-201ENST00000222690 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
H2AFV-201ENST00000222690 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
H2AFV-201ENST00000222690 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
H2AFV-201ENST00000222690 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
H2AFV-201ENST00000222690 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
H2AFV-201ENST00000222690 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
H2AFV-201ENST00000222690 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
H2AFV-201ENST00000222690 PHGR1C9JFL3 82 aa2.4□□□□□ -2.02
H2AFV-201ENST00000222690 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
H2AFV-201ENST00000222690 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 87 ms