RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 KRTAP19-3Q7Z4W3 81 aa6.01□□□□□ -1.45
GCDH-201ENST00000222214 MT1GP13640 62 aa6□□□□□ -1.45
GCDH-201ENST00000222214 KRTAP9-6A8MVA2 160 aa5.98□□□□□ -1.45
GCDH-201ENST00000222214 SPRR2FQ96RM1 72 aa5.95□□□□□ -1.46
GCDH-201ENST00000222214 SYNE2Q8WXH0 6885 aaKnown RBP5.93□□□□□ -1.46
GCDH-201ENST00000222214 MT1MQ8N339 61 aa5.91□□□□□ -1.46
GCDH-201ENST00000222214 LCE5AQ5TCM9 118 aa5.86□□□□□ -1.47
GCDH-201ENST00000222214 KRTAP9-6A0A140TA67 174 aa5.84□□□□□ -1.47
GCDH-201ENST00000222214 MUC12Q9UKN1 5478 aa5.83□□□□□ -1.48
GCDH-201ENST00000222214 KRTAP5-9P26371 169 aa5.8□□□□□ -1.48
GCDH-201ENST00000222214 KRTAP4-3Q9BYR4 195 aa5.76□□□□□ -1.49
GCDH-201ENST00000222214 KRTAP2-3P0C7H8 128 aa5.71□□□□□ -1.49
GCDH-201ENST00000222214 KRTAP2-4Q9BYR9 128 aa5.71□□□□□ -1.49
GCDH-201ENST00000222214 KRTAP2-1Q9BYU5 128 aa5.71□□□□□ -1.49
GCDH-201ENST00000222214 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.68□□□□□ -1.5
GCDH-201ENST00000222214 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.51
GCDH-201ENST00000222214 LCE1AQ5T7P2 110 aa5.64□□□□□ -1.51
GCDH-201ENST00000222214 INE1O15225 51 aa5.62□□□□□ -1.51
GCDH-201ENST00000222214 MDN1Q9NU22 5596 aa5.61□□□□□ -1.51
GCDH-201ENST00000222214 SPRR2EP22531 72 aa5.56□□□□□ -1.52
GCDH-201ENST00000222214 SPRR2BP35325 72 aa5.56□□□□□ -1.52
GCDH-201ENST00000222214 SPRR2AP35326 72 aa5.56□□□□□ -1.52
GCDH-201ENST00000222214 KRTAP6-3Q3LI67 103 aa5.54□□□□□ -1.52
GCDH-201ENST00000222214 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
GCDH-201ENST00000222214 KRTAP9-7A8MTY7 169 aa5.35□□□□□ -1.55
GCDH-201ENST00000222214 SPRR2DP22532 72 aa5.35□□□□□ -1.55
GCDH-201ENST00000222214 NEBP20929 6669 aa5.33□□□□□ -1.56
GCDH-201ENST00000222214 MT1AP04731 61 aa5.3□□□□□ -1.56
GCDH-201ENST00000222214 KRTAP5-5Q701N2 237 aaPredicted RBP5.3□□□□□ -1.56
GCDH-201ENST00000222214 KRTAP6-1Q3LI64 71 aa5.22□□□□□ -1.57
GCDH-201ENST00000222214 LCE3BQ5TA77 95 aa5.15□□□□□ -1.58
GCDH-201ENST00000222214 KRTAP9-4Q9BYQ2 154 aa5.01□□□□□ -1.61
GCDH-201ENST00000222214 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
GCDH-201ENST00000222214 KRTAP5-4Q6L8H1 288 aa4.92□□□□□ -1.62
GCDH-201ENST00000222214 KRTAP12-4P60329 112 aa4.91□□□□□ -1.62
GCDH-201ENST00000222214 KRTAP4-9Q9BYQ8 210 aa4.88□□□□□ -1.63
GCDH-201ENST00000222214 LCE3DQ9BYE3 92 aa4.84□□□□□ -1.63
GCDH-201ENST00000222214 MT3P25713 68 aa4.8□□□□□ -1.64
GCDH-201ENST00000222214 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
GCDH-201ENST00000222214 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
GCDH-201ENST00000222214 LCE3EQ5T5B0 92 aa4.74□□□□□ -1.65
GCDH-201ENST00000222214 KRTAP20-1Q3LI63 56 aa4.71□□□□□ -1.66
GCDH-201ENST00000222214 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
GCDH-201ENST00000222214 MT4P47944 62 aa4.61□□□□□ -1.67
GCDH-201ENST00000222214 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
GCDH-201ENST00000222214 KRTAP20-2Q3LI61 65 aa4.58□□□□□ -1.68
GCDH-201ENST00000222214 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
GCDH-201ENST00000222214 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
GCDH-201ENST00000222214 LCE1DQ5T752 114 aa4.48□□□□□ -1.69
GCDH-201ENST00000222214 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
GCDH-201ENST00000222214 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
GCDH-201ENST00000222214 PRM1P04553 51 aa4.26□□□□□ -1.73
GCDH-201ENST00000222214 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
GCDH-201ENST00000222214 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
GCDH-201ENST00000222214 KRTAP4-11Q9BYQ6 195 aa3.89□□□□□ -1.79
GCDH-201ENST00000222214 KRTAP5-10Q6L8G5 202 aa3.85□□□□□ -1.79
GCDH-201ENST00000222214 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
GCDH-201ENST00000222214 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
GCDH-201ENST00000222214 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
GCDH-201ENST00000222214 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
GCDH-201ENST00000222214 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
GCDH-201ENST00000222214 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
GCDH-201ENST00000222214 KRTAP5-7Q6L8G8 165 aa3.71□□□□□ -1.82
GCDH-201ENST00000222214 GPR98Q8WXG9 6306 aa3.69□□□□□ -1.82
GCDH-201ENST00000222214 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
GCDH-201ENST00000222214 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
GCDH-201ENST00000222214 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.88
GCDH-201ENST00000222214 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
GCDH-201ENST00000222214 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
GCDH-201ENST00000222214 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
GCDH-201ENST00000222214 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
GCDH-201ENST00000222214 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
GCDH-201ENST00000222214 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
GCDH-201ENST00000222214 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
GCDH-201ENST00000222214 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
GCDH-201ENST00000222214 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
GCDH-201ENST00000222214 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 111.5 ms