RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 SYNE1Q8NF91 8797 aaKnown RBP4.03□□□□□ -1.76
DNMT3B-201ENST00000201963 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
DNMT3B-201ENST00000201963 KMT2DO14686 5537 aa4.02□□□□□ -1.77
DNMT3B-201ENST00000201963 FCGBPQ9Y6R7 5405 aaPredicted RBP4.01□□□□□ -1.77
DNMT3B-201ENST00000201963 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.01□□□□□ -1.77
DNMT3B-201ENST00000201963 SPRR2DP22532 72 aa3.99□□□□□ -1.77
DNMT3B-201ENST00000201963 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
DNMT3B-201ENST00000201963 DSTQ03001 7570 aaKnown RBP3.96□□□□□ -1.78
DNMT3B-201ENST00000201963 KRTAP4-7Q9BYR0 210 aa3.95□□□□□ -1.78
DNMT3B-201ENST00000201963 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
DNMT3B-201ENST00000201963 KRTAP19-4Q3LI73 84 aa3.91□□□□□ -1.78
DNMT3B-201ENST00000201963 MT1GP13640 62 aa3.87□□□□□ -1.79
DNMT3B-201ENST00000201963 LCE3BQ5TA77 95 aa3.84□□□□□ -1.79
DNMT3B-201ENST00000201963 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
DNMT3B-201ENST00000201963 KRTAP6-3Q3LI67 103 aa3.77□□□□□ -1.81
DNMT3B-201ENST00000201963 MT1LQ93083 61 aa3.76□□□□□ -1.81
DNMT3B-201ENST00000201963 KRTAP19-3Q7Z4W3 81 aa3.76□□□□□ -1.81
DNMT3B-201ENST00000201963 MT1EP04732 61 aa3.74□□□□□ -1.81
DNMT3B-201ENST00000201963 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
DNMT3B-201ENST00000201963 KRTAP20-1Q3LI63 56 aa3.69□□□□□ -1.82
DNMT3B-201ENST00000201963 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
DNMT3B-201ENST00000201963 LOC100996750A0A140TA64 210 aa3.66□□□□□ -1.82
DNMT3B-201ENST00000201963 KRTAP19-7Q3SYF9 63 aa3.65□□□□□ -1.82
DNMT3B-201ENST00000201963 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.82
DNMT3B-201ENST00000201963 KRTAP2-3P0C7H8 128 aa3.65□□□□□ -1.83
DNMT3B-201ENST00000201963 KRTAP2-4Q9BYR9 128 aa3.65□□□□□ -1.83
DNMT3B-201ENST00000201963 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.83
DNMT3B-201ENST00000201963 MT4P47944 62 aa3.64□□□□□ -1.83
DNMT3B-201ENST00000201963 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
DNMT3B-201ENST00000201963 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
DNMT3B-201ENST00000201963 MT1MQ8N339 61 aa3.61□□□□□ -1.83
DNMT3B-201ENST00000201963 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
DNMT3B-201ENST00000201963 NEBP20929 6669 aa3.58□□□□□ -1.84
DNMT3B-201ENST00000201963 KRTAP4-9Q9BYQ8 210 aa3.51□□□□□ -1.85
DNMT3B-201ENST00000201963 PRM1P04553 51 aa3.5□□□□□ -1.85
DNMT3B-201ENST00000201963 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
DNMT3B-201ENST00000201963 KRTAP5-9P26371 169 aa3.42□□□□□ -1.86
DNMT3B-201ENST00000201963 LCE5AQ5TCM9 118 aa3.42□□□□□ -1.86
DNMT3B-201ENST00000201963 MT1AP04731 61 aa3.23□□□□□ -1.89
DNMT3B-201ENST00000201963 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
DNMT3B-201ENST00000201963 MT3P25713 68 aa3.21□□□□□ -1.9
DNMT3B-201ENST00000201963 KRTAP6-1Q3LI64 71 aa3.21□□□□□ -1.9
DNMT3B-201ENST00000201963 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
DNMT3B-201ENST00000201963 LCE1DQ5T752 114 aa3.15□□□□□ -1.91
DNMT3B-201ENST00000201963 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
DNMT3B-201ENST00000201963 KRTAP4-6Q9BYQ5 205 aa3.11□□□□□ -1.91
DNMT3B-201ENST00000201963 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
DNMT3B-201ENST00000201963 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
DNMT3B-201ENST00000201963 KRTAP9-4Q9BYQ2 154 aa2.96□□□□□ -1.94
DNMT3B-201ENST00000201963 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
DNMT3B-201ENST00000201963 KRTAP20-2Q3LI61 65 aa2.91□□□□□ -1.94
DNMT3B-201ENST00000201963 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
DNMT3B-201ENST00000201963 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
DNMT3B-201ENST00000201963 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
DNMT3B-201ENST00000201963 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
DNMT3B-201ENST00000201963 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.97
DNMT3B-201ENST00000201963 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
DNMT3B-201ENST00000201963 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
DNMT3B-201ENST00000201963 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
DNMT3B-201ENST00000201963 AHNAK2Q8IVF2 5795 aa2.64□□□□□ -1.99
DNMT3B-201ENST00000201963 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
DNMT3B-201ENST00000201963 KRTAP4-12Q9BQ66 201 aa2.46□□□□□ -2.02
DNMT3B-201ENST00000201963 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
DNMT3B-201ENST00000201963 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
DNMT3B-201ENST00000201963 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
DNMT3B-201ENST00000201963 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
DNMT3B-201ENST00000201963 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
DNMT3B-201ENST00000201963 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
DNMT3B-201ENST00000201963 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
DNMT3B-201ENST00000201963 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.06
DNMT3B-201ENST00000201963 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
DNMT3B-201ENST00000201963 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
DNMT3B-201ENST00000201963 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
DNMT3B-201ENST00000201963 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
DNMT3B-201ENST00000201963 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
DNMT3B-201ENST00000201963 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
DNMT3B-201ENST00000201963 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 70.1 ms