RNA–Protein interactions for RNA: ENST00000159111.8

KDM4B-201, Transcript of lysine demethylase 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4B, Length 5,593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-201ENST00000159111 KRTAP9-2Q9BYQ4 174 aa5.24□□□□□ -1.57
KDM4B-201ENST00000159111 LCE2AQ5TA79 106 aaPredicted RBP5.23□□□□□ -1.57
KDM4B-201ENST00000159111 LOC100996750A0A140TA64 210 aa5.17□□□□□ -1.58
KDM4B-201ENST00000159111 KRTAP19-7Q3SYF9 63 aa5.15□□□□□ -1.58
KDM4B-201ENST00000159111 KRTAP4-3Q9BYR4 195 aa5.12□□□□□ -1.59
KDM4B-201ENST00000159111 PRM1P04553 51 aa5.1□□□□□ -1.59
KDM4B-201ENST00000159111 KRTAP9-6A0A140TA67 174 aa5.07□□□□□ -1.6
KDM4B-201ENST00000159111 HMCN2Q8NDA2 5059 aa5.06□□□□□ -1.6
KDM4B-201ENST00000159111 MT4P47944 62 aa5.06□□□□□ -1.6
KDM4B-201ENST00000159111 MT1AP04731 61 aa5.05□□□□□ -1.6
KDM4B-201ENST00000159111 FAT4Q6V0I7 4981 aa5.04□□□□□ -1.6
KDM4B-201ENST00000159111 UBR4Q5T4S7 5183 aa5.03□□□□□ -1.6
KDM4B-201ENST00000159111 RNF213Q63HN8 5207 aa5.01□□□□□ -1.61
KDM4B-201ENST00000159111 KRTAP2-3P0C7H8 128 aa4.99□□□□□ -1.61
KDM4B-201ENST00000159111 KRTAP2-4Q9BYR9 128 aa4.99□□□□□ -1.61
KDM4B-201ENST00000159111 KRTAP2-1Q9BYU5 128 aa4.99□□□□□ -1.61
KDM4B-201ENST00000159111 SYNE1Q8NF91 8797 aaKnown RBP4.91□□□□□ -1.62
KDM4B-201ENST00000159111 FSIP2Q5CZC0 6907 aa4.9□□□□□ -1.62
KDM4B-201ENST00000159111 MUC2Q02817 5179 aa4.86□□□□□ -1.63
KDM4B-201ENST00000159111 LCE1AQ5T7P2 110 aa4.84□□□□□ -1.63
KDM4B-201ENST00000159111 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
KDM4B-201ENST00000159111 LCE1BQ5T7P3 118 aa4.82□□□□□ -1.64
KDM4B-201ENST00000159111 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
KDM4B-201ENST00000159111 KRTAP9-7A8MTY7 169 aa4.75□□□□□ -1.65
KDM4B-201ENST00000159111 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
KDM4B-201ENST00000159111 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
KDM4B-201ENST00000159111 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
KDM4B-201ENST00000159111 KRTAP20-1Q3LI63 56 aa4.68□□□□□ -1.66
KDM4B-201ENST00000159111 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
KDM4B-201ENST00000159111 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
KDM4B-201ENST00000159111 SYNE2Q8WXH0 6885 aaKnown RBP4.64□□□□□ -1.67
KDM4B-201ENST00000159111 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
KDM4B-201ENST00000159111 KRTAP6-2Q3LI66 62 aa4.59□□□□□ -1.68
KDM4B-201ENST00000159111 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.53□□□□□ -1.68
KDM4B-201ENST00000159111 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
KDM4B-201ENST00000159111 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
KDM4B-201ENST00000159111 KMT2DO14686 5537 aa4.33□□□□□ -1.72
KDM4B-201ENST00000159111 USH2AO75445 5202 aa4.25□□□□□ -1.73
KDM4B-201ENST00000159111 FCGBPQ9Y6R7 5405 aaPredicted RBP4.18□□□□□ -1.74
KDM4B-201ENST00000159111 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
KDM4B-201ENST00000159111 MACF1Q9UPN3 7388 aaKnown RBP4.07□□□□□ -1.76
KDM4B-201ENST00000159111 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
KDM4B-201ENST00000159111 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
KDM4B-201ENST00000159111 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
KDM4B-201ENST00000159111 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
KDM4B-201ENST00000159111 NEBP20929 6669 aa3.95□□□□□ -1.78
KDM4B-201ENST00000159111 SSPOA2VEC9 5147 aa3.93□□□□□ -1.78
KDM4B-201ENST00000159111 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
KDM4B-201ENST00000159111 GPR98Q8WXG9 6306 aa3.87□□□□□ -1.79
KDM4B-201ENST00000159111 MUC12Q9UKN1 5478 aa3.87□□□□□ -1.79
KDM4B-201ENST00000159111 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
KDM4B-201ENST00000159111 KRTAP4-6Q9BYQ5 205 aa3.81□□□□□ -1.8
KDM4B-201ENST00000159111 MDN1Q9NU22 5596 aa3.77□□□□□ -1.81
KDM4B-201ENST00000159111 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
KDM4B-201ENST00000159111 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
KDM4B-201ENST00000159111 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.82
KDM4B-201ENST00000159111 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
KDM4B-201ENST00000159111 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
KDM4B-201ENST00000159111 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
KDM4B-201ENST00000159111 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
KDM4B-201ENST00000159111 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
KDM4B-201ENST00000159111 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
KDM4B-201ENST00000159111 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
KDM4B-201ENST00000159111 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
KDM4B-201ENST00000159111 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
KDM4B-201ENST00000159111 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
KDM4B-201ENST00000159111 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
KDM4B-201ENST00000159111 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
KDM4B-201ENST00000159111 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
KDM4B-201ENST00000159111 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
KDM4B-201ENST00000159111 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
KDM4B-201ENST00000159111 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
KDM4B-201ENST00000159111 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
KDM4B-201ENST00000159111 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
KDM4B-201ENST00000159111 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.36□□□□□ -2.03
KDM4B-201ENST00000159111 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
KDM4B-201ENST00000159111 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 96.5 ms