RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 FCGBPQ9Y6R7 5405 aaPredicted RBP6.71□□□□□ -1.33
RCN1-201ENST00000054950 MUC12Q9UKN1 5478 aa6.68□□□□□ -1.34
RCN1-201ENST00000054950 KRTAP19-4Q3LI73 84 aa6.63□□□□□ -1.35
RCN1-201ENST00000054950 MT1GP13640 62 aa6.61□□□□□ -1.35
RCN1-201ENST00000054950 LCE2DQ5TA82 110 aaPredicted RBP6.56□□□□□ -1.36
RCN1-201ENST00000054950 CRCT1Q9UGL9 99 aa6.56□□□□□ -1.36
RCN1-201ENST00000054950 KRTAP19-6Q3LI70 58 aa6.54□□□□□ -1.36
RCN1-201ENST00000054950 DSTQ03001 7570 aaKnown RBP6.47□□□□□ -1.37
RCN1-201ENST00000054950 MT1MQ8N339 61 aa6.45□□□□□ -1.38
RCN1-201ENST00000054950 KRTAP19-3Q7Z4W3 81 aa6.4□□□□□ -1.39
RCN1-201ENST00000054950 KRTAP12-4P60329 112 aa6.28□□□□□ -1.4
RCN1-201ENST00000054950 LCE3BQ5TA77 95 aa6.17□□□□□ -1.42
RCN1-201ENST00000054950 SPRR2FQ96RM1 72 aa6.15□□□□□ -1.42
RCN1-201ENST00000054950 KRTAP4-9Q9BYQ8 210 aa6.15□□□□□ -1.42
RCN1-201ENST00000054950 LCE5AQ5TCM9 118 aa6.14□□□□□ -1.43
RCN1-201ENST00000054950 SYNE1Q8NF91 8797 aaKnown RBP6.08□□□□□ -1.44
RCN1-201ENST00000054950 MACF1Q9UPN3 7388 aaKnown RBP6.05□□□□□ -1.44
RCN1-201ENST00000054950 KRTAP6-1Q3LI64 71 aa5.96□□□□□ -1.46
RCN1-201ENST00000054950 MDN1Q9NU22 5596 aa5.96□□□□□ -1.46
RCN1-201ENST00000054950 KRTAP9-2Q9BYQ4 174 aa5.95□□□□□ -1.46
RCN1-201ENST00000054950 SYNE2Q8WXH0 6885 aaKnown RBP5.91□□□□□ -1.46
RCN1-201ENST00000054950 MT1AP04731 61 aa5.8□□□□□ -1.48
RCN1-201ENST00000054950 LCE3DQ9BYE3 92 aa5.76□□□□□ -1.49
RCN1-201ENST00000054950 KRTAP9-7A8MTY7 169 aa5.73□□□□□ -1.49
RCN1-201ENST00000054950 LCE3EQ5T5B0 92 aa5.68□□□□□ -1.5
RCN1-201ENST00000054950 KRTAP5-5Q701N2 237 aaPredicted RBP5.68□□□□□ -1.5
RCN1-201ENST00000054950 LCE1AQ5T7P2 110 aa5.65□□□□□ -1.51
RCN1-201ENST00000054950 PRM1P04553 51 aa5.62□□□□□ -1.51
RCN1-201ENST00000054950 KRTAP5-9P26371 169 aa5.6□□□□□ -1.51
RCN1-201ENST00000054950 OBSCNQ5VST9 7968 aa5.59□□□□□ -1.52
RCN1-201ENST00000054950 SPRR2EP22531 72 aa5.51□□□□□ -1.53
RCN1-201ENST00000054950 SPRR2BP35325 72 aa5.51□□□□□ -1.53
RCN1-201ENST00000054950 SPRR2AP35326 72 aa5.51□□□□□ -1.53
RCN1-201ENST00000054950 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
RCN1-201ENST00000054950 KRTAP6-2Q3LI66 62 aa5.4□□□□□ -1.55
RCN1-201ENST00000054950 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.34□□□□□ -1.55
RCN1-201ENST00000054950 SPRR2DP22532 72 aa5.28□□□□□ -1.56
RCN1-201ENST00000054950 KRTAP6-3Q3LI67 103 aa5.28□□□□□ -1.56
RCN1-201ENST00000054950 KRTAP9-6A0A140TA67 174 aa5.24□□□□□ -1.57
RCN1-201ENST00000054950 MT3P25713 68 aa5.15□□□□□ -1.58
RCN1-201ENST00000054950 NEBP20929 6669 aa4.96□□□□□ -1.62
RCN1-201ENST00000054950 KRTAP2-2Q9BYT5 123 aa4.9□□□□□ -1.62
RCN1-201ENST00000054950 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
RCN1-201ENST00000054950 KRTAP5-4Q6L8H1 288 aa4.79□□□□□ -1.64
RCN1-201ENST00000054950 MT4P47944 62 aa4.73□□□□□ -1.65
RCN1-201ENST00000054950 KRTAP20-2Q3LI61 65 aa4.58□□□□□ -1.68
RCN1-201ENST00000054950 MUC5ACP98088 5654 aa4.56□□□□□ -1.68
RCN1-201ENST00000054950 LCE4AQ5TA78 99 aa4.56□□□□□ -1.68
RCN1-201ENST00000054950 KRTAP5-2Q701N4 177 aa4.53□□□□□ -1.68
RCN1-201ENST00000054950 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
RCN1-201ENST00000054950 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
RCN1-201ENST00000054950 KRTAP20-1Q3LI63 56 aa4.34□□□□□ -1.72
RCN1-201ENST00000054950 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
RCN1-201ENST00000054950 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
RCN1-201ENST00000054950 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
RCN1-201ENST00000054950 KRTAP5-10Q6L8G5 202 aa4.2□□□□□ -1.74
RCN1-201ENST00000054950 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
RCN1-201ENST00000054950 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
RCN1-201ENST00000054950 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
RCN1-201ENST00000054950 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
RCN1-201ENST00000054950 KRTAP21-2Q3LI59 83 aa3.8□□□□□ -1.8
RCN1-201ENST00000054950 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.82
RCN1-201ENST00000054950 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
RCN1-201ENST00000054950 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
RCN1-201ENST00000054950 AHNAK2Q8IVF2 5795 aa3.63□□□□□ -1.83
RCN1-201ENST00000054950 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
RCN1-201ENST00000054950 KRTAP5-7Q6L8G8 165 aa3.5□□□□□ -1.85
RCN1-201ENST00000054950 KRTAP21-1Q3LI58 79 aa3.47□□□□□ -1.85
RCN1-201ENST00000054950 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
RCN1-201ENST00000054950 MUC5BQ9HC84 5762 aaPredicted RBP3.41□□□□□ -1.86
RCN1-201ENST00000054950 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
RCN1-201ENST00000054950 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
RCN1-201ENST00000054950 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
RCN1-201ENST00000054950 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
RCN1-201ENST00000054950 PHGR1C9JFL3 82 aa2.9□□□□□ -1.94
RCN1-201ENST00000054950 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
RCN1-201ENST00000054950 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms