RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 SSPOA2VEC9 5147 aa4.23□□□□□ -1.73
TSPAN9-201ENST00000011898 SPRR2DP22532 72 aa4.17□□□□□ -1.74
TSPAN9-201ENST00000011898 SYNE2Q8WXH0 6885 aaKnown RBP4.14□□□□□ -1.75
TSPAN9-201ENST00000011898 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
TSPAN9-201ENST00000011898 FCGBPQ9Y6R7 5405 aaPredicted RBP4.11□□□□□ -1.75
TSPAN9-201ENST00000011898 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.75
TSPAN9-201ENST00000011898 LCE3BQ5TA77 95 aa4.07□□□□□ -1.76
TSPAN9-201ENST00000011898 MT1GP13640 62 aa4.06□□□□□ -1.76
TSPAN9-201ENST00000011898 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.03□□□□□ -1.76
TSPAN9-201ENST00000011898 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
TSPAN9-201ENST00000011898 KRTAP9-7A8MTY7 169 aa4□□□□□ -1.77
TSPAN9-201ENST00000011898 MT1LQ93083 61 aa4□□□□□ -1.77
TSPAN9-201ENST00000011898 MT1EP04732 61 aa3.97□□□□□ -1.77
TSPAN9-201ENST00000011898 KMT2DO14686 5537 aa3.95□□□□□ -1.78
TSPAN9-201ENST00000011898 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
TSPAN9-201ENST00000011898 KRTAP19-7Q3SYF9 63 aa3.95□□□□□ -1.78
TSPAN9-201ENST00000011898 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
TSPAN9-201ENST00000011898 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
TSPAN9-201ENST00000011898 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
TSPAN9-201ENST00000011898 KRTAP19-3Q7Z4W3 81 aa3.89□□□□□ -1.79
TSPAN9-201ENST00000011898 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
TSPAN9-201ENST00000011898 PRM1P04553 51 aa3.85□□□□□ -1.79
TSPAN9-201ENST00000011898 MT4P47944 62 aa3.82□□□□□ -1.8
TSPAN9-201ENST00000011898 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
TSPAN9-201ENST00000011898 KRTAP4-3Q9BYR4 195 aa3.8□□□□□ -1.8
TSPAN9-201ENST00000011898 MT1MQ8N339 61 aa3.79□□□□□ -1.8
TSPAN9-201ENST00000011898 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
TSPAN9-201ENST00000011898 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
TSPAN9-201ENST00000011898 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
TSPAN9-201ENST00000011898 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
TSPAN9-201ENST00000011898 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
TSPAN9-201ENST00000011898 KRTAP2-1Q9BYU5 128 aa3.74□□□□□ -1.81
TSPAN9-201ENST00000011898 LCE5AQ5TCM9 118 aa3.72□□□□□ -1.81
TSPAN9-201ENST00000011898 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.83
TSPAN9-201ENST00000011898 NEBP20929 6669 aa3.62□□□□□ -1.83
TSPAN9-201ENST00000011898 KRTAP4-9Q9BYQ8 210 aa3.62□□□□□ -1.83
TSPAN9-201ENST00000011898 MDN1Q9NU22 5596 aa3.6□□□□□ -1.83
TSPAN9-201ENST00000011898 MT1AP04731 61 aa3.46□□□□□ -1.86
TSPAN9-201ENST00000011898 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
TSPAN9-201ENST00000011898 MT3P25713 68 aa3.44□□□□□ -1.86
TSPAN9-201ENST00000011898 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
TSPAN9-201ENST00000011898 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
TSPAN9-201ENST00000011898 KRTAP6-1Q3LI64 71 aa3.39□□□□□ -1.87
TSPAN9-201ENST00000011898 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
TSPAN9-201ENST00000011898 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
TSPAN9-201ENST00000011898 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.88
TSPAN9-201ENST00000011898 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
TSPAN9-201ENST00000011898 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
TSPAN9-201ENST00000011898 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
TSPAN9-201ENST00000011898 KRTAP5-4Q6L8H1 288 aa3.18□□□□□ -1.9
TSPAN9-201ENST00000011898 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
TSPAN9-201ENST00000011898 KRTAP4-6Q9BYQ5 205 aa3.08□□□□□ -1.92
TSPAN9-201ENST00000011898 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
TSPAN9-201ENST00000011898 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
TSPAN9-201ENST00000011898 KRTAP4-11Q9BYQ6 195 aa2.87□□□□□ -1.95
TSPAN9-201ENST00000011898 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
TSPAN9-201ENST00000011898 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
TSPAN9-201ENST00000011898 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
TSPAN9-201ENST00000011898 KRTAP5-3Q6L8H2 238 aa2.86□□□□□ -1.95
TSPAN9-201ENST00000011898 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
TSPAN9-201ENST00000011898 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
TSPAN9-201ENST00000011898 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
TSPAN9-201ENST00000011898 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
TSPAN9-201ENST00000011898 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
TSPAN9-201ENST00000011898 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
TSPAN9-201ENST00000011898 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
TSPAN9-201ENST00000011898 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
TSPAN9-201ENST00000011898 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
TSPAN9-201ENST00000011898 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
TSPAN9-201ENST00000011898 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
TSPAN9-201ENST00000011898 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
TSPAN9-201ENST00000011898 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
TSPAN9-201ENST00000011898 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
TSPAN9-201ENST00000011898 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
TSPAN9-201ENST00000011898 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
TSPAN9-201ENST00000011898 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
TSPAN9-201ENST00000011898 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms