RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 K7EQZ3 153 aa3.6□□□□□ -1.83
RTTN-215ENST00000639487 LINC00304Q8N9R0 145 aa3.6□□□□□ -1.83
RTTN-215ENST00000639487 RPL37P61927 97 aaKnown RBP3.59□□□□□ -1.83
RTTN-215ENST00000639487 STAB2Q8WWQ8 2551 aa3.59□□□□□ -1.84
RTTN-215ENST00000639487 MTORP42345 2549 aa3.58□□□□□ -1.84
RTTN-215ENST00000639487 C1orf137Q5JT78 98 aa3.57□□□□□ -1.84
RTTN-215ENST00000639487 A0A0G2JQZ4 141 aa3.57□□□□□ -1.84
RTTN-215ENST00000639487 DSCR10P59022 87 aa3.57□□□□□ -1.84
RTTN-215ENST00000639487 SPATA8Q6RVD6 105 aa3.57□□□□□ -1.84
RTTN-215ENST00000639487 H0YAA0 97 aa3.54□□□□□ -1.84
RTTN-215ENST00000639487 A0A087WSZ3 146 aa3.53□□□□□ -1.84
RTTN-215ENST00000639487 H3BPC8 53 aa3.53□□□□□ -1.84
RTTN-215ENST00000639487 IGFL1Q6UW32 110 aa3.53□□□□□ -1.84
RTTN-215ENST00000639487 PCOTHQ58A44 107 aa3.53□□□□□ -1.84
RTTN-215ENST00000639487 IGLV7-46A0A075B6I9 117 aa3.53□□□□□ -1.85
RTTN-215ENST00000639487 SPINT4Q6UDR6 99 aa3.52□□□□□ -1.85
RTTN-215ENST00000639487 A0A1B0GVX0 72 aa3.51□□□□□ -1.85
RTTN-215ENST00000639487 TYMSOSQ8TAI1 123 aa3.51□□□□□ -1.85
RTTN-215ENST00000639487 UQCR11O14957 56 aa3.51□□□□□ -1.85
RTTN-215ENST00000639487 LORP23490 312 aaPredicted RBP3.51□□□□□ -1.85
RTTN-215ENST00000639487 DMAC1Q96GE9 116 aa3.51□□□□□ -1.85
RTTN-215ENST00000639487 A0A1B0GU69 56 aa3.49□□□□□ -1.85
RTTN-215ENST00000639487 Q5W150 140 aa3.48□□□□□ -1.85
RTTN-215ENST00000639487 TP53AIP1Q9HCN2 124 aa3.47□□□□□ -1.85
RTTN-215ENST00000639487 HRES1P13985 223 aa3.47□□□□□ -1.85
RTTN-215ENST00000639487 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.86
RTTN-215ENST00000639487 LPAP08519 4548 aa3.44□□□□□ -1.86
RTTN-215ENST00000639487 SRRM2Q9UQ35 2752 aaKnown RBP3.44□□□□□ -1.86
RTTN-215ENST00000639487 FLG2Q5D862 2391 aaPredicted RBP3.43□□□□□ -1.86
RTTN-215ENST00000639487 CRIPTQ9P021 101 aa3.42□□□□□ -1.86
RTTN-215ENST00000639487 CAMK2N1Q7Z7J9 78 aa3.41□□□□□ -1.86
RTTN-215ENST00000639487 MMP24-AS1A0A0U1RRL7 71 aa3.41□□□□□ -1.86
RTTN-215ENST00000639487 FAT4Q6V0I7 4981 aa3.4□□□□□ -1.87
RTTN-215ENST00000639487 IGKV2-24A0A0C4DH68 120 aa3.39□□□□□ -1.87
RTTN-215ENST00000639487 PRLHP81277 87 aa3.39□□□□□ -1.87
RTTN-215ENST00000639487 NOTCH1P46531 2555 aa3.34□□□□□ -1.88
RTTN-215ENST00000639487 KRTAP19-8Q3LI54 63 aa3.32□□□□□ -1.88
RTTN-215ENST00000639487 MT1HP80294 61 aa3.31□□□□□ -1.88
RTTN-215ENST00000639487 MRPL34Q9BQ48 92 aaKnown RBP3.3□□□□□ -1.88
RTTN-215ENST00000639487 IGKV2-30P06310 120 aa3.3□□□□□ -1.88
RTTN-215ENST00000639487 ACYP2P14621 99 aa3.29□□□□□ -1.88
RTTN-215ENST00000639487 KRTAP23-1A1A580 65 aa3.28□□□□□ -1.88
RTTN-215ENST00000639487 KRTAP4-1Q9BYQ7 146 aa3.28□□□□□ -1.88
RTTN-215ENST00000639487 SMR3BP02814 79 aaPredicted RBP3.27□□□□□ -1.89
RTTN-215ENST00000639487 KRTAP9-8Q9BYQ0 159 aa3.27□□□□□ -1.89
RTTN-215ENST00000639487 A0A1B0GU33 70 aa3.26□□□□□ -1.89
RTTN-215ENST00000639487 KRTAP10-6P60371 365 aaPredicted RBP3.26□□□□□ -1.89
RTTN-215ENST00000639487 SPRR2GQ9BYE4 73 aa3.26□□□□□ -1.89
RTTN-215ENST00000639487 KRTAP19-4Q3LI73 84 aa3.25□□□□□ -1.89
RTTN-215ENST00000639487 KRTAP19-6Q3LI70 58 aa3.23□□□□□ -1.89
RTTN-215ENST00000639487 IGKV2D-30A0A075B6S6 120 aa3.22□□□□□ -1.89
RTTN-215ENST00000639487 UBR4Q5T4S7 5183 aa3.21□□□□□ -1.9
RTTN-215ENST00000639487 KRTAP9-3Q9BYQ3 159 aa3.21□□□□□ -1.9
RTTN-215ENST00000639487 RNF213Q63HN8 5207 aa3.21□□□□□ -1.9
RTTN-215ENST00000639487 DMBT1Q9UGM3 2413 aaPredicted RBP3.21□□□□□ -1.9
RTTN-215ENST00000639487 COX6B2Q6YFQ2 88 aa3.2□□□□□ -1.9
RTTN-215ENST00000639487 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
RTTN-215ENST00000639487 H1FX-AS1Q4G0G2 97 aa3.2□□□□□ -1.9
RTTN-215ENST00000639487 C10orf95Q9H7T3 257 aa3.16□□□□□ -1.9
RTTN-215ENST00000639487 ANAPC11Q9NYG5 84 aa3.16□□□□□ -1.9
RTTN-215ENST00000639487 R4GN34 69 aa3.15□□□□□ -1.91
RTTN-215ENST00000639487 PRO2289Q9P1D8 64 aa3.14□□□□□ -1.91
RTTN-215ENST00000639487 KRTAP3-1Q9BYR8 98 aa3.11□□□□□ -1.91
RTTN-215ENST00000639487 MT2AP02795 61 aa3.1□□□□□ -1.91
RTTN-215ENST00000639487 KRTAP4-8Q9BYQ9 185 aa3.1□□□□□ -1.91
RTTN-215ENST00000639487 KRTAP5-3Q6L8H2 238 aa3.07□□□□□ -1.92
RTTN-215ENST00000639487 KRTAP5-9P26371 169 aa3.05□□□□□ -1.92
RTTN-215ENST00000639487 PLAC4Q8WY50 150 aa3.03□□□□□ -1.92
RTTN-215ENST00000639487 KRTAP19-1Q8IUB9 90 aa3.01□□□□□ -1.93
RTTN-215ENST00000639487 KRTAP4-8A0A0G2JLE6 195 aa3.01□□□□□ -1.93
RTTN-215ENST00000639487 KRTAP10-5P60370 271 aa3.01□□□□□ -1.93
RTTN-215ENST00000639487 A0A0D9SG42 100 aa3□□□□□ -1.93
RTTN-215ENST00000639487 USH2AO75445 5202 aa2.99□□□□□ -1.93
RTTN-215ENST00000639487 KRTAP4-7Q9BYR0 210 aa2.99□□□□□ -1.93
RTTN-215ENST00000639487 MT1FP04733 61 aa2.98□□□□□ -1.93
RTTN-215ENST00000639487 KRTAP9-2Q9BYQ4 174 aa2.97□□□□□ -1.93
RTTN-215ENST00000639487 KRTAP6-3Q3LI67 103 aa2.96□□□□□ -1.94
RTTN-215ENST00000639487 M0QZ58 72 aa2.96□□□□□ -1.94
RTTN-215ENST00000639487 MT1BP07438 61 aa2.96□□□□□ -1.94
RTTN-215ENST00000639487 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.95□□□□□ -1.94
RTTN-215ENST00000639487 KRTAP10-12P60413 245 aa2.95□□□□□ -1.94
RTTN-215ENST00000639487 KRTAP9-6A0A140TA67 174 aa2.94□□□□□ -1.94
RTTN-215ENST00000639487 S4R3F8 94 aa2.94□□□□□ -1.94
RTTN-215ENST00000639487 SSPOA2VEC9 5147 aa2.94□□□□□ -1.94
RTTN-215ENST00000639487 KRTAP13-4Q3LI77 160 aa2.92□□□□□ -1.94
RTTN-215ENST00000639487 C9orf92A6NGG3 77 aa2.9□□□□□ -1.95
RTTN-215ENST00000639487 INE1O15225 51 aa2.89□□□□□ -1.95
RTTN-215ENST00000639487 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
RTTN-215ENST00000639487 CRCT1Q9UGL9 99 aa2.87□□□□□ -1.95
RTTN-215ENST00000639487 KRTAP10-10P60014 251 aa2.87□□□□□ -1.95
RTTN-215ENST00000639487 LCE3BQ5TA77 95 aa2.87□□□□□ -1.95
RTTN-215ENST00000639487 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
RTTN-215ENST00000639487 KRTAP9-4Q9BYQ2 154 aa2.79□□□□□ -1.96
RTTN-215ENST00000639487 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
RTTN-215ENST00000639487 MT1XP80297 61 aa2.78□□□□□ -1.96
RTTN-215ENST00000639487 LCE4AQ5TA78 99 aa2.78□□□□□ -1.96
RTTN-215ENST00000639487 KRTAP4-9Q9BYQ8 210 aa2.76□□□□□ -1.97
RTTN-215ENST00000639487 KRTAP12-1P59990 96 aa2.75□□□□□ -1.97
RTTN-215ENST00000639487 LCE1DQ5T752 114 aa2.73□□□□□ -1.97
RTTN-215ENST00000639487 PP632Q6XCG6 107 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms